RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 CACNA2D2Q9NY47 1150 aa6.58□□□□□ -1.36
SMC4-225ENST00000497203 PCDHGC5Q9Y5F6 944 aa6.58□□□□□ -1.36
SMC4-225ENST00000497203 SORBS3O60504 671 aa6.57□□□□□ -1.36
SMC4-225ENST00000497203 CCDC85BQ15834 202 aaPredicted RBP6.57□□□□□ -1.36
SMC4-225ENST00000497203 GSX1Q9H4S2 264 aaPredicted RBP6.57□□□□□ -1.36
SMC4-225ENST00000497203 SAMM50Q9Y512 469 aa6.57□□□□□ -1.36
SMC4-225ENST00000497203 COL17A1Q9UMD9 1497 aaPredicted RBP6.57□□□□□ -1.36
SMC4-225ENST00000497203 SLFN14P0C7P3 912 aa6.56□□□□□ -1.36
SMC4-225ENST00000497203 RAB6AP20340 208 aa6.56□□□□□ -1.36
SMC4-225ENST00000497203 ASPAP45381 313 aa6.56□□□□□ -1.36
SMC4-225ENST00000497203 MRPL58Q14197 206 aaKnown RBP6.56□□□□□ -1.36
SMC4-225ENST00000497203 RNF43Q68DV7 783 aa6.56□□□□□ -1.36
SMC4-225ENST00000497203 LLGL2Q6P1M3 1020 aa6.56□□□□□ -1.36
SMC4-225ENST00000497203 CRIM1Q9NZV1 1036 aa6.56□□□□□ -1.36
SMC4-225ENST00000497203 VTI1BQ9UEU0 232 aa6.56□□□□□ -1.36
SMC4-225ENST00000497203 FAM95CA0A1B0GW59 222 aa6.55□□□□□ -1.36
SMC4-225ENST00000497203 IGLV1-40P01703 118 aa6.55□□□□□ -1.36
SMC4-225ENST00000497203 TCF3P15923 654 aa6.55□□□□□ -1.36
SMC4-225ENST00000497203 ID3Q02535 119 aa6.55□□□□□ -1.36
SMC4-225ENST00000497203 NFIAQ12857 509 aa6.55□□□□□ -1.36
SMC4-225ENST00000497203 TAF1CQ15572 869 aaPredicted RBP6.55□□□□□ -1.36
SMC4-225ENST00000497203 MAP3K11Q16584 847 aa6.55□□□□□ -1.36
SMC4-225ENST00000497203 TTBK2Q6IQ55 1244 aa6.55□□□□□ -1.36
SMC4-225ENST00000497203 EZH1Q92800 747 aaPredicted RBP6.55□□□□□ -1.36
SMC4-225ENST00000497203 ACSBG1Q96GR2 724 aa6.55□□□□□ -1.36
SMC4-225ENST00000497203 CRELD1Q96HD1 420 aa6.55□□□□□ -1.36
SMC4-225ENST00000497203 FANCD2OSQ96PS1 177 aa6.55□□□□□ -1.36
SMC4-225ENST00000497203 SEMA6CQ9H3T2 930 aa6.55□□□□□ -1.36
SMC4-225ENST00000497203 ACSS3Q9H6R3 686 aa6.55□□□□□ -1.36
SMC4-225ENST00000497203 DISC1Q9NRI5 854 aa6.55□□□□□ -1.36
SMC4-225ENST00000497203 USP31Q70CQ4 1352 aa6.55□□□□□ -1.36
SMC4-225ENST00000497203 PAX4O43316 350 aa6.54□□□□□ -1.36
SMC4-225ENST00000497203 TRIM37O94972 964 aa6.54□□□□□ -1.36
SMC4-225ENST00000497203 NFICP08651 508 aa6.54□□□□□ -1.36
SMC4-225ENST00000497203 ST13P50502 369 aaKnown RBP6.54□□□□□ -1.36
SMC4-225ENST00000497203 PTPN11Q06124 597 aaPredicted RBP6.54□□□□□ -1.36
SMC4-225ENST00000497203 LRRC14Q15048 493 aa6.54□□□□□ -1.36
SMC4-225ENST00000497203 NFKBIBQ15653 356 aa6.54□□□□□ -1.36
SMC4-225ENST00000497203 TSNAXIP1Q2TAA8 658 aa6.54□□□□□ -1.36
SMC4-225ENST00000497203 ZC3H12AQ5D1E8 599 aaKnown RBP6.54□□□□□ -1.36
SMC4-225ENST00000497203 IGSF5Q9NSI5 407 aa6.54□□□□□ -1.36
SMC4-225ENST00000497203 CYP8B1Q9UNU6 501 aa6.54□□□□□ -1.36
SMC4-225ENST00000497203 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.53□□□□□ -1.36
SMC4-225ENST00000497203 GSC2O15499 205 aa6.53□□□□□ -1.36
SMC4-225ENST00000497203 DYNC1LI2O43237 492 aaPredicted RBP6.53□□□□□ -1.36
SMC4-225ENST00000497203 RECKO95980 971 aa6.53□□□□□ -1.36
SMC4-225ENST00000497203 LIG3P49916 1009 aa6.53□□□□□ -1.36
SMC4-225ENST00000497203 HNRNPUQ00839 825 aaKnown RBP eCLIP6.53□□□□□ -1.36
SMC4-225ENST00000497203 PAOXQ6QHF9 649 aa6.53□□□□□ -1.36
SMC4-225ENST00000497203 SHISA5Q8N114 240 aa6.53□□□□□ -1.36
SMC4-225ENST00000497203 GAL3ST3Q96A11 431 aa6.53□□□□□ -1.36
SMC4-225ENST00000497203 MFSD14AQ96MC6 490 aa6.53□□□□□ -1.36
SMC4-225ENST00000497203 DBNDD2Q9BQY9 259 aa6.53□□□□□ -1.36
SMC4-225ENST00000497203 YIPF2Q9BWQ6 316 aa6.53□□□□□ -1.36
SMC4-225ENST00000497203 ATXN3LQ9H3M9 355 aa6.53□□□□□ -1.36
SMC4-225ENST00000497203 SCAMP3O14828 347 aaKnown RBP6.52□□□□□ -1.37
SMC4-225ENST00000497203 NEFMP07197 916 aa6.52□□□□□ -1.37
SMC4-225ENST00000497203 ADMP35318 185 aa6.52□□□□□ -1.37
SMC4-225ENST00000497203 TTLL4Q14679 1199 aa6.52□□□□□ -1.37
SMC4-225ENST00000497203 KRTAP5-3Q6L8H2 238 aa6.52□□□□□ -1.37
SMC4-225ENST00000497203 SLC51AQ86UW1 340 aa6.52□□□□□ -1.37
SMC4-225ENST00000497203 ZDHHC13Q8IUH4 622 aa6.52□□□□□ -1.37
SMC4-225ENST00000497203 SHKBP1Q8TBC3 707 aa6.52□□□□□ -1.37
SMC4-225ENST00000497203 NOC4LQ9BVI4 516 aaKnown RBP6.52□□□□□ -1.37
SMC4-225ENST00000497203 BACH2Q9BYV9 841 aa6.52□□□□□ -1.37
SMC4-225ENST00000497203 PIDD1Q9HB75 910 aa6.52□□□□□ -1.37
SMC4-225ENST00000497203 LGR6Q9HBX8 967 aa6.52□□□□□ -1.37
SMC4-225ENST00000497203 PRKAG2Q9UGJ0 569 aa6.52□□□□□ -1.37
SMC4-225ENST00000497203 PCDHA4Q9UN74 947 aa6.52□□□□□ -1.37
SMC4-225ENST00000497203 DAGLAQ9Y4D2 1042 aa6.52□□□□□ -1.37
SMC4-225ENST00000497203 PCDHB5Q9Y5E4 795 aa6.52□□□□□ -1.37
SMC4-225ENST00000497203 CSADQ9Y600 493 aa6.52□□□□□ -1.37
SMC4-225ENST00000497203 DCDC2CA8MYV0 355 aa6.51□□□□□ -1.37
SMC4-225ENST00000497203 F6X3S4 739 aa6.51□□□□□ -1.37
SMC4-225ENST00000497203 HCLS1P14317 486 aaPredicted RBP6.51□□□□□ -1.37
SMC4-225ENST00000497203 RPS26P62854 115 aaKnown RBP6.51□□□□□ -1.37
SMC4-225ENST00000497203 ERVK-24P63145 666 aa6.51□□□□□ -1.37
SMC4-225ENST00000497203 MAP7Q14244 749 aa6.51□□□□□ -1.37
SMC4-225ENST00000497203 SCARA3Q6AZY7 606 aa6.51□□□□□ -1.37
SMC4-225ENST00000497203 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.51□□□□□ -1.37
SMC4-225ENST00000497203 AGMOQ6ZNB7 445 aa6.51□□□□□ -1.37
SMC4-225ENST00000497203 FBXL6Q8N531 539 aa6.51□□□□□ -1.37
SMC4-225ENST00000497203 TMEM87AQ8NBN3 555 aa6.51□□□□□ -1.37
SMC4-225ENST00000497203 GATA6Q92908 595 aa6.51□□□□□ -1.37
SMC4-225ENST00000497203 WDR64B1ANS9 1081 aa6.5□□□□□ -1.37
SMC4-225ENST00000497203 TGFB1P01137 390 aa6.5□□□□□ -1.37
SMC4-225ENST00000497203 F13BP05160 661 aa6.5□□□□□ -1.37
SMC4-225ENST00000497203 TFE3P19532 575 aaPredicted RBP6.5□□□□□ -1.37
SMC4-225ENST00000497203 CDK8P49336 464 aa6.5□□□□□ -1.37
SMC4-225ENST00000497203 SEPT6Q14141 434 aa6.5□□□□□ -1.37
SMC4-225ENST00000497203 INPP5AQ14642 412 aa6.5□□□□□ -1.37
SMC4-225ENST00000497203 PPM1JQ5JR12 505 aa6.5□□□□□ -1.37
SMC4-225ENST00000497203 SEZ6L2Q6UXD5 910 aa6.5□□□□□ -1.37
SMC4-225ENST00000497203 C12orf40Q86WS4 652 aa6.5□□□□□ -1.37
SMC4-225ENST00000497203 METTL5Q9NRN9 209 aaKnown RBP6.5□□□□□ -1.37
SMC4-225ENST00000497203 C1GALT1Q9NS00 363 aa6.5□□□□□ -1.37
SMC4-225ENST00000497203 TLR6Q9Y2C9 796 aa6.5□□□□□ -1.37
SMC4-225ENST00000497203 PRR19A6NJB7 356 aa6.49□□□□□ -1.37
SMC4-225ENST00000497203 RNGTTO60942 597 aaKnown RBP6.49□□□□□ -1.37
SMC4-225ENST00000497203 NTF4P34130 210 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms