RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 ZSWIM9Q86XI8 627 aa6.32□□□□□ -1.4
VPS26A-208ENST00000497022 ZSCAN18Q8TBC5 510 aaPredicted RBP6.32□□□□□ -1.4
VPS26A-208ENST00000497022 CCDC74AQ96AQ1 378 aa6.32□□□□□ -1.4
VPS26A-208ENST00000497022 ALKBH8Q96BT7 664 aaKnown RBP6.32□□□□□ -1.4
VPS26A-208ENST00000497022 PPP1R16BQ96T49 567 aa6.32□□□□□ -1.4
VPS26A-208ENST00000497022 ATXN3LQ9H3M9 355 aa6.32□□□□□ -1.4
VPS26A-208ENST00000497022 PIDD1Q9HB75 910 aa6.32□□□□□ -1.4
VPS26A-208ENST00000497022 NPHS2Q9NP85 383 aa6.32□□□□□ -1.4
VPS26A-208ENST00000497022 DCTN4Q9UJW0 460 aa6.32□□□□□ -1.4
VPS26A-208ENST00000497022 PPP1R9AQ9ULJ8 1098 aa6.32□□□□□ -1.4
VPS26A-208ENST00000497022 TMPRSS2O15393 492 aa6.31□□□□□ -1.4
VPS26A-208ENST00000497022 CEACAM5P06731 702 aa6.31□□□□□ -1.4
VPS26A-208ENST00000497022 RAP1GAPP47736 663 aa6.31□□□□□ -1.4
VPS26A-208ENST00000497022 HNRNPUQ00839 825 aaKnown RBP eCLIP6.31□□□□□ -1.4
VPS26A-208ENST00000497022 CDK5R2Q13319 367 aa6.31□□□□□ -1.4
VPS26A-208ENST00000497022 AOC3Q16853 763 aa6.31□□□□□ -1.4
VPS26A-208ENST00000497022 TMC7Q7Z402 723 aa6.31□□□□□ -1.4
VPS26A-208ENST00000497022 CSRNP1Q96S65 589 aa6.31□□□□□ -1.4
VPS26A-208ENST00000497022 LGR6Q9HBX8 967 aa6.31□□□□□ -1.4
VPS26A-208ENST00000497022 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.31□□□□□ -1.4
VPS26A-208ENST00000497022 CRIM1Q9NZV1 1036 aa6.31□□□□□ -1.4
VPS26A-208ENST00000497022 ARHGAP27Q6ZUM4 889 aa6.3□□□□□ -1.4
VPS26A-208ENST00000497022 SIAH1Q8IUQ4 282 aa6.3□□□□□ -1.4
VPS26A-208ENST00000497022 EHD4Q9H223 541 aa6.3□□□□□ -1.4
VPS26A-208ENST00000497022 ZNF576Q9H609 170 aa6.3□□□□□ -1.4
VPS26A-208ENST00000497022 IVNS1ABPQ9Y6Y0 642 aa6.3□□□□□ -1.4
VPS26A-208ENST00000497022 ITPKAP23677 461 aa6.29□□□□□ -1.4
VPS26A-208ENST00000497022 CD96P40200 585 aa6.29□□□□□ -1.4
VPS26A-208ENST00000497022 OXCT1P55809 520 aa6.29□□□□□ -1.4
VPS26A-208ENST00000497022 KCNA1Q09470 495 aa6.29□□□□□ -1.4
VPS26A-208ENST00000497022 KCNMB1Q16558 191 aa6.29□□□□□ -1.4
VPS26A-208ENST00000497022 SMYD4Q8IYR2 804 aaPredicted RBP6.29□□□□□ -1.4
VPS26A-208ENST00000497022 FANCD2OSQ96PS1 177 aa6.29□□□□□ -1.4
VPS26A-208ENST00000497022 TRAIPQ9BWF2 469 aa6.29□□□□□ -1.4
VPS26A-208ENST00000497022 RAPGEFL1Q9UHV5 662 aa6.29□□□□□ -1.4
VPS26A-208ENST00000497022 SNX11Q9Y5W9 270 aa6.29□□□□□ -1.4
VPS26A-208ENST00000497022 NCANO14594 1321 aa6.28□□□□□ -1.4
VPS26A-208ENST00000497022 ZNF503-AS2A6NEH8 195 aa6.28□□□□□ -1.4
VPS26A-208ENST00000497022 GADD45BO75293 160 aaPredicted RBP6.28□□□□□ -1.4
VPS26A-208ENST00000497022 SLFN14P0C7P3 912 aa6.28□□□□□ -1.4
VPS26A-208ENST00000497022 ZNF865P0CJ78 1059 aaPredicted RBP6.28□□□□□ -1.4
VPS26A-208ENST00000497022 CFPP27918 469 aa6.28□□□□□ -1.4
VPS26A-208ENST00000497022 MAPK1P28482 360 aa6.28□□□□□ -1.4
VPS26A-208ENST00000497022 ID3Q02535 119 aa6.28□□□□□ -1.4
VPS26A-208ENST00000497022 PTPN12Q05209 780 aaKnown RBP6.28□□□□□ -1.4
VPS26A-208ENST00000497022 DSC3Q14574 896 aa6.28□□□□□ -1.4
VPS26A-208ENST00000497022 MLANAQ16655 118 aa6.28□□□□□ -1.4
VPS26A-208ENST00000497022 LILRA6Q6PI73 481 aa6.28□□□□□ -1.4
VPS26A-208ENST00000497022 C1QL4Q86Z23 238 aa6.28□□□□□ -1.4
VPS26A-208ENST00000497022 EPS8L3Q8TE67 593 aaKnown RBP6.28□□□□□ -1.4
VPS26A-208ENST00000497022 TNKS2Q9H2K2 1166 aa6.28□□□□□ -1.4
VPS26A-208ENST00000497022 U3KQE9 123 aa6.28□□□□□ -1.4
VPS26A-208ENST00000497022 TREHO43280 583 aa6.27□□□□□ -1.41
VPS26A-208ENST00000497022 PLCB3Q01970 1234 aa6.27□□□□□ -1.41
VPS26A-208ENST00000497022 PRPF40BQ6NWY9 871 aaKnown RBP6.27□□□□□ -1.41
VPS26A-208ENST00000497022 LRRC56Q8IYG6 542 aaPredicted RBP6.27□□□□□ -1.41
VPS26A-208ENST00000497022 DUSP23Q9BVJ7 150 aa6.27□□□□□ -1.41
VPS26A-208ENST00000497022 ABCB6Q9NP58 842 aa6.27□□□□□ -1.41
VPS26A-208ENST00000497022 PLAGL2Q9UPG8 496 aa6.27□□□□□ -1.41
VPS26A-208ENST00000497022 TMEM238LA0A1B0GVL6 79 aa6.26□□□□□ -1.41
VPS26A-208ENST00000497022 PRRG2O14669 202 aa6.26□□□□□ -1.41
VPS26A-208ENST00000497022 GRM2Q14416 872 aa6.26□□□□□ -1.41
VPS26A-208ENST00000497022 RPS26P11Q5JNZ5 115 aaPredicted RBP6.26□□□□□ -1.41
VPS26A-208ENST00000497022 LCNL1Q6ZST4 164 aa6.26□□□□□ -1.41
VPS26A-208ENST00000497022 ASB11Q8WXH4 323 aa6.26□□□□□ -1.41
VPS26A-208ENST00000497022 KRT82Q9NSB4 513 aa6.26□□□□□ -1.41
VPS26A-208ENST00000497022 KIF4BQ2VIQ3 1234 aa6.25□□□□□ -1.41
VPS26A-208ENST00000497022 ANKLE2Q86XL3 938 aa6.25□□□□□ -1.41
VPS26A-208ENST00000497022 CCDC86Q9H6F5 360 aaKnown RBP6.25□□□□□ -1.41
VPS26A-208ENST00000497022 DISC1Q9NRI5 854 aa6.25□□□□□ -1.41
VPS26A-208ENST00000497022 NLRP2Q9NX02 1062 aa6.25□□□□□ -1.41
VPS26A-208ENST00000497022 PCOLCE2Q9UKZ9 415 aa6.25□□□□□ -1.41
VPS26A-208ENST00000497022 TRAK1Q9UPV9 953 aa6.25□□□□□ -1.41
VPS26A-208ENST00000497022 PCDHGC5Q9Y5F6 944 aa6.25□□□□□ -1.41
VPS26A-208ENST00000497022 PNMA6FA0A0J9YX94 578 aa6.24□□□□□ -1.41
VPS26A-208ENST00000497022 LEFTY1O75610 366 aa6.24□□□□□ -1.41
VPS26A-208ENST00000497022 LIG1P18858 919 aa6.24□□□□□ -1.41
VPS26A-208ENST00000497022 AFMP43652 599 aa6.24□□□□□ -1.41
VPS26A-208ENST00000497022 TTLL4Q14679 1199 aa6.24□□□□□ -1.41
VPS26A-208ENST00000497022 ENOX2Q16206 610 aaKnown RBP6.24□□□□□ -1.41
VPS26A-208ENST00000497022 PI16Q6UXB8 463 aa6.24□□□□□ -1.41
VPS26A-208ENST00000497022 WDR89Q96FK6 387 aaPredicted RBP6.24□□□□□ -1.41
VPS26A-208ENST00000497022 CTNND2Q9UQB3 1225 aa6.24□□□□□ -1.41
VPS26A-208ENST00000497022 B8ZZF3 427 aa6.23□□□□□ -1.41
VPS26A-208ENST00000497022 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.23□□□□□ -1.41
VPS26A-208ENST00000497022 ZSCAN22P10073 491 aaPredicted RBP6.23□□□□□ -1.41
VPS26A-208ENST00000497022 ZSCAN29Q8IWY8 852 aaPredicted RBP6.23□□□□□ -1.41
VPS26A-208ENST00000497022 BCO2Q9BYV7 579 aa6.23□□□□□ -1.41
VPS26A-208ENST00000497022 PPP4R2Q9NY27 417 aa6.23□□□□□ -1.41
VPS26A-208ENST00000497022 PATL2C9JE40 543 aaKnown RBP6.22□□□□□ -1.41
VPS26A-208ENST00000497022 IGF2BP3O00425 579 aaKnown RBP eCLIP6.22□□□□□ -1.41
VPS26A-208ENST00000497022 ZNF862O60290 1169 aa6.22□□□□□ -1.41
VPS26A-208ENST00000497022 RNGTTO60942 597 aaKnown RBP6.22□□□□□ -1.41
VPS26A-208ENST00000497022 GLI1P08151 1106 aa6.22□□□□□ -1.41
VPS26A-208ENST00000497022 ITIH2P19823 946 aa6.22□□□□□ -1.41
VPS26A-208ENST00000497022 FCGRTP55899 365 aa6.22□□□□□ -1.41
VPS26A-208ENST00000497022 ZP2Q05996 745 aa6.22□□□□□ -1.41
VPS26A-208ENST00000497022 FAAP100Q0VG06 881 aa6.22□□□□□ -1.41
VPS26A-208ENST00000497022 IKZF1Q13422 519 aa6.22□□□□□ -1.41
VPS26A-208ENST00000497022 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms