RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 SLC38A3Q99624 504 aa6.92□□□□□ -1.3
CLK1-214ENST00000496205 TMEM265A0A087WTH1 108 aa6.91□□□□□ -1.3
CLK1-214ENST00000496205 TMEM238LA0A1B0GVL6 79 aa6.91□□□□□ -1.3
CLK1-214ENST00000496205 LRRC10BA6NIK2 292 aa6.91□□□□□ -1.3
CLK1-214ENST00000496205 GSTP1P09211 210 aaKnown RBP6.91□□□□□ -1.3
CLK1-214ENST00000496205 RPS26P11Q5JNZ5 115 aaPredicted RBP6.91□□□□□ -1.3
CLK1-214ENST00000496205 ANGEL2Q5VTE6 544 aaKnown RBP6.91□□□□□ -1.3
CLK1-214ENST00000496205 FAM214BQ7L5A3 538 aa6.91□□□□□ -1.3
CLK1-214ENST00000496205 FLAD1Q8NFF5 587 aa6.91□□□□□ -1.3
CLK1-214ENST00000496205 TNKS2Q9H2K2 1166 aa6.91□□□□□ -1.3
CLK1-214ENST00000496205 PCOLCE2Q9UKZ9 415 aa6.91□□□□□ -1.3
CLK1-214ENST00000496205 MTMR7Q9Y216 660 aa6.91□□□□□ -1.3
CLK1-214ENST00000496205 CPNE3O75131 537 aaKnown RBP6.9□□□□□ -1.3
CLK1-214ENST00000496205 ZNF865P0CJ78 1059 aaPredicted RBP6.9□□□□□ -1.3
CLK1-214ENST00000496205 PDIA4P13667 645 aaKnown RBP6.9□□□□□ -1.3
CLK1-214ENST00000496205 ITIH2P19823 946 aa6.9□□□□□ -1.3
CLK1-214ENST00000496205 PRPF40BQ6NWY9 871 aaKnown RBP6.9□□□□□ -1.3
CLK1-214ENST00000496205 ARHGAP27Q6ZUM4 889 aa6.9□□□□□ -1.3
CLK1-214ENST00000496205 PDZD3Q86UT5 571 aa6.9□□□□□ -1.3
CLK1-214ENST00000496205 TOP6BLQ8N6T0 577 aa6.9□□□□□ -1.3
CLK1-214ENST00000496205 ISL2Q96A47 359 aa6.9□□□□□ -1.3
CLK1-214ENST00000496205 TRAIPQ9BWF2 469 aa6.9□□□□□ -1.3
CLK1-214ENST00000496205 KRT82Q9NSB4 513 aa6.9□□□□□ -1.3
CLK1-214ENST00000496205 PODXL2Q9NZ53 605 aa6.9□□□□□ -1.3
CLK1-214ENST00000496205 BRPF3Q9ULD4 1205 aa6.9□□□□□ -1.3
CLK1-214ENST00000496205 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.89□□□□□ -1.31
CLK1-214ENST00000496205 ICMTO60725 284 aa6.89□□□□□ -1.31
CLK1-214ENST00000496205 PPP1R15AO75807 674 aaPredicted RBP6.89□□□□□ -1.31
CLK1-214ENST00000496205 MLANAQ16655 118 aa6.89□□□□□ -1.31
CLK1-214ENST00000496205 ZSWIM9Q86XI8 627 aa6.89□□□□□ -1.31
CLK1-214ENST00000496205 STK35Q8TDR2 534 aa6.89□□□□□ -1.31
CLK1-214ENST00000496205 CCDC74AQ96AQ1 378 aa6.89□□□□□ -1.31
CLK1-214ENST00000496205 NEFLP07196 543 aa6.88□□□□□ -1.31
CLK1-214ENST00000496205 CFPP27918 469 aa6.88□□□□□ -1.31
CLK1-214ENST00000496205 KRTAP19-4Q3LI73 84 aa6.88□□□□□ -1.31
CLK1-214ENST00000496205 C1QL4Q86Z23 238 aa6.88□□□□□ -1.31
CLK1-214ENST00000496205 BHLHE22Q8NFJ8 381 aaPredicted RBP6.88□□□□□ -1.31
CLK1-214ENST00000496205 LIN37Q96GY3 246 aaPredicted RBP6.88□□□□□ -1.31
CLK1-214ENST00000496205 ARHGAP4P98171 946 aa6.87□□□□□ -1.31
CLK1-214ENST00000496205 GRM2Q14416 872 aa6.87□□□□□ -1.31
CLK1-214ENST00000496205 KCNMB1Q16558 191 aa6.87□□□□□ -1.31
CLK1-214ENST00000496205 ZC3H12AQ5D1E8 599 aaKnown RBP6.87□□□□□ -1.31
CLK1-214ENST00000496205 FYB2Q5VWT5 728 aa6.87□□□□□ -1.31
CLK1-214ENST00000496205 CCER1Q8TC90 406 aaPredicted RBP6.87□□□□□ -1.31
CLK1-214ENST00000496205 KCNB2Q92953 911 aa6.87□□□□□ -1.31
CLK1-214ENST00000496205 FAM129BQ96TA1 746 aa6.87□□□□□ -1.31
CLK1-214ENST00000496205 CTNND2Q9UQB3 1225 aa6.87□□□□□ -1.31
CLK1-214ENST00000496205 SNX11Q9Y5W9 270 aa6.87□□□□□ -1.31
CLK1-214ENST00000496205 EIF1AYO14602 144 aaKnown RBP6.86□□□□□ -1.31
CLK1-214ENST00000496205 GADD45BO75293 160 aaPredicted RBP6.86□□□□□ -1.31
CLK1-214ENST00000496205 IGHA2P01877 340 aa6.86□□□□□ -1.31
CLK1-214ENST00000496205 ZP2Q05996 745 aa6.86□□□□□ -1.31
CLK1-214ENST00000496205 LCNL1Q6ZST4 164 aa6.86□□□□□ -1.31
CLK1-214ENST00000496205 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.86□□□□□ -1.31
CLK1-214ENST00000496205 SPACA3Q8IXA5 215 aa6.86□□□□□ -1.31
CLK1-214ENST00000496205 SSU72Q9NP77 194 aaKnown RBP6.86□□□□□ -1.31
CLK1-214ENST00000496205 H3BRB1 525 aa6.85□□□□□ -1.31
CLK1-214ENST00000496205 RAP1GAPP47736 663 aa6.85□□□□□ -1.31
CLK1-214ENST00000496205 SERPINB4P48594 390 aa6.85□□□□□ -1.31
CLK1-214ENST00000496205 IKZF1Q13422 519 aa6.85□□□□□ -1.31
CLK1-214ENST00000496205 NKPD1Q17RQ9 610 aa6.85□□□□□ -1.31
CLK1-214ENST00000496205 RNF214Q8ND24 703 aa6.85□□□□□ -1.31
CLK1-214ENST00000496205 EPS8L3Q8TE67 593 aaKnown RBP6.85□□□□□ -1.31
CLK1-214ENST00000496205 KRTAP4-5Q9BYR2 181 aa6.85□□□□□ -1.31
CLK1-214ENST00000496205 TUT1Q9H6E5 874 aaKnown RBP6.85□□□□□ -1.31
CLK1-214ENST00000496205 FAM53CQ9NYF3 392 aa6.85□□□□□ -1.31
CLK1-214ENST00000496205 EGFL7Q9UHF1 273 aa6.85□□□□□ -1.31
CLK1-214ENST00000496205 UBE3DQ7Z6J8 389 aa6.84□□□□□ -1.31
CLK1-214ENST00000496205 ASB11Q8WXH4 323 aa6.84□□□□□ -1.31
CLK1-214ENST00000496205 NIF3L1Q9GZT8 377 aa6.84□□□□□ -1.31
CLK1-214ENST00000496205 TMEM39AQ9NV64 488 aa6.84□□□□□ -1.31
CLK1-214ENST00000496205 GPR182O15218 404 aa6.83□□□□□ -1.32
CLK1-214ENST00000496205 ERVK-24P63145 666 aa6.83□□□□□ -1.32
CLK1-214ENST00000496205 PDE3BQ13370 1112 aa6.83□□□□□ -1.32
CLK1-214ENST00000496205 MPRIPQ6WCQ1 1025 aa6.83□□□□□ -1.32
CLK1-214ENST00000496205 PRR23BQ6ZRT6 265 aa6.83□□□□□ -1.32
CLK1-214ENST00000496205 GLYCTKQ8IVS8 523 aa6.83□□□□□ -1.32
CLK1-214ENST00000496205 TOX2Q96NM4 488 aa6.83□□□□□ -1.32
CLK1-214ENST00000496205 DNAJC25Q9H1X3 360 aa6.83□□□□□ -1.32
CLK1-214ENST00000496205 GPN3Q9UHW5 284 aaPredicted RBP6.83□□□□□ -1.32
CLK1-214ENST00000496205 TRAK1Q9UPV9 953 aa6.83□□□□□ -1.32
CLK1-214ENST00000496205 IGF2BP3O00425 579 aaKnown RBP eCLIP6.82□□□□□ -1.32
CLK1-214ENST00000496205 NDUFB5O43674 189 aa6.82□□□□□ -1.32
CLK1-214ENST00000496205 TSPAN15O95858 294 aa6.82□□□□□ -1.32
CLK1-214ENST00000496205 KRT1P04264 644 aa6.82□□□□□ -1.32
CLK1-214ENST00000496205 NTF4P34130 210 aa6.82□□□□□ -1.32
CLK1-214ENST00000496205 FCGRTP55899 365 aa6.82□□□□□ -1.32
CLK1-214ENST00000496205 MAP1SQ66K74 1059 aaPredicted RBP6.82□□□□□ -1.32
CLK1-214ENST00000496205 DTHD1Q6ZMT9 781 aa6.82□□□□□ -1.32
CLK1-214ENST00000496205 SULF2Q8IWU5 870 aa6.82□□□□□ -1.32
CLK1-214ENST00000496205 PRDM10Q9NQV6 1147 aa6.82□□□□□ -1.32
CLK1-214ENST00000496205 ARNTP27540 789 aa6.81□□□□□ -1.32
CLK1-214ENST00000496205 PPP2R3AQ06190 1150 aa6.81□□□□□ -1.32
CLK1-214ENST00000496205 PPM1JQ5JR12 505 aa6.81□□□□□ -1.32
CLK1-214ENST00000496205 LCE5AQ5TCM9 118 aa6.81□□□□□ -1.32
CLK1-214ENST00000496205 PI16Q6UXB8 463 aa6.81□□□□□ -1.32
CLK1-214ENST00000496205 SYDE1Q6ZW31 735 aaPredicted RBP6.81□□□□□ -1.32
CLK1-214ENST00000496205 LRRC56Q8IYG6 542 aaPredicted RBP6.81□□□□□ -1.32
CLK1-214ENST00000496205 GPBAR1Q8TDU6 330 aa6.81□□□□□ -1.32
CLK1-214ENST00000496205 GTF2IRD1Q9UHL9 959 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms