RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 SH3BP5LQ7L8J4 393 aa16.2■□□□□ 0.18
PTPN7-218ENST00000496197 TMEM39BQ9GZU3 492 aa16.2■□□□□ 0.18
PTPN7-218ENST00000496197 DCP1AQ9NPI6 582 aaPredicted RBP16.2■□□□□ 0.18
PTPN7-218ENST00000496197 HSPD1P10809 573 aaKnown RBP16.19■□□□□ 0.18
PTPN7-218ENST00000496197 FMR1Q06787 632 aaKnown RBP eCLIP16.19■□□□□ 0.18
PTPN7-218ENST00000496197 SLC4A8Q2Y0W8 1093 aa16.19■□□□□ 0.18
PTPN7-218ENST00000496197 PRAMEF18Q5VWM3 479 aa16.19■□□□□ 0.18
PTPN7-218ENST00000496197 CRNKL1Q9BZJ0 848 aaKnown RBP16.19■□□□□ 0.18
PTPN7-218ENST00000496197 OSBPL5Q9H0X9 879 aaPredicted RBP16.19■□□□□ 0.18
PTPN7-218ENST00000496197 PITPNM2Q9BZ72 1349 aa16.19■□□□□ 0.18
PTPN7-218ENST00000496197 SSC5DA1L4H1 1573 aa16.19■□□□□ 0.18
PTPN7-218ENST00000496197 DDTLA6NHG4 134 aaPredicted RBP16.18■□□□□ 0.18
PTPN7-218ENST00000496197 SEC24BO95487 1268 aa16.18■□□□□ 0.18
PTPN7-218ENST00000496197 USP5P45974 858 aa16.18■□□□□ 0.18
PTPN7-218ENST00000496197 ZC3H15Q8WU90 426 aaKnown RBP16.18■□□□□ 0.18
PTPN7-218ENST00000496197 RUFY2Q8WXA3 655 aa16.18■□□□□ 0.18
PTPN7-218ENST00000496197 TEPSINQ96N21 525 aa16.18■□□□□ 0.18
PTPN7-218ENST00000496197 GLIS2Q9BZE0 524 aaPredicted RBP16.18■□□□□ 0.18
PTPN7-218ENST00000496197 SAP30BPQ9UHR5 308 aaKnown RBP16.18■□□□□ 0.18
PTPN7-218ENST00000496197 CLEC11AQ9Y240 323 aa16.18■□□□□ 0.18
PTPN7-218ENST00000496197 MYH8P13535 1937 aa16.18■□□□□ 0.18
PTPN7-218ENST00000496197 PAPPA2Q9BXP8 1791 aa16.17■□□□□ 0.18
PTPN7-218ENST00000496197 CYP2D7A0A087X1C5 515 aa16.17■□□□□ 0.18
PTPN7-218ENST00000496197 PATL2C9JE40 543 aaKnown RBP16.17■□□□□ 0.18
PTPN7-218ENST00000496197 CYP2D6P10635 497 aa16.17■□□□□ 0.18
PTPN7-218ENST00000496197 RASA3Q14644 834 aa16.17■□□□□ 0.18
PTPN7-218ENST00000496197 LDHDQ86WU2 507 aa16.17■□□□□ 0.18
PTPN7-218ENST00000496197 CERS3Q8IU89 383 aa16.17■□□□□ 0.18
PTPN7-218ENST00000496197 LSG1Q9H089 658 aaKnown RBP16.17■□□□□ 0.18
PTPN7-218ENST00000496197 DEFB129Q9H1M3 183 aa16.17■□□□□ 0.18
PTPN7-218ENST00000496197 TMOD2Q9NZR1 351 aa16.17■□□□□ 0.18
PTPN7-218ENST00000496197 OTOFQ9HC10 1997 aa16.17■□□□□ 0.18
PTPN7-218ENST00000496197 TRPM7Q96QT4 1865 aa16.17■□□□□ 0.18
PTPN7-218ENST00000496197 RPAP1Q9BWH6 1393 aaPredicted RBP16.17■□□□□ 0.18
PTPN7-218ENST00000496197 FKBP1CQ5VVH2 108 aa16.16■□□□□ 0.18
PTPN7-218ENST00000496197 USP48Q86UV5 1035 aa16.16■□□□□ 0.18
PTPN7-218ENST00000496197 FAM83AQ86UY5 434 aa16.16■□□□□ 0.18
PTPN7-218ENST00000496197 APOBEC3FQ8IUX4 373 aaKnown RBP16.16■□□□□ 0.18
PTPN7-218ENST00000496197 IFNL3Q8IZI9 196 aa16.16■□□□□ 0.18
PTPN7-218ENST00000496197 FAM151AQ8WW52 585 aa16.16■□□□□ 0.18
PTPN7-218ENST00000496197 DCPSQ96C86 337 aaKnown RBP16.16■□□□□ 0.18
PTPN7-218ENST00000496197 PALD1Q9ULE6 856 aa16.16■□□□□ 0.18
PTPN7-218ENST00000496197 COL2A1P02458 1487 aaPredicted RBP16.16■□□□□ 0.18
PTPN7-218ENST00000496197 TRAF5O00463 557 aa16.16■□□□□ 0.18
PTPN7-218ENST00000496197 ENTPD3O75355 529 aa16.16■□□□□ 0.18
PTPN7-218ENST00000496197 NPM3O75607 178 aaKnown RBP16.16■□□□□ 0.18
PTPN7-218ENST00000496197 GNAT2P19087 354 aa16.16■□□□□ 0.18
PTPN7-218ENST00000496197 CTR9Q6PD62 1173 aa16.16■□□□□ 0.18
PTPN7-218ENST00000496197 KRT26Q7Z3Y9 468 aa16.16■□□□□ 0.18
PTPN7-218ENST00000496197 ATP8A2Q9NTI2 1148 aa16.16■□□□□ 0.18
PTPN7-218ENST00000496197 ATRNL1Q5VV63 1379 aa16.15■□□□□ 0.18
PTPN7-218ENST00000496197 FGAP02671 866 aa16.15■□□□□ 0.18
PTPN7-218ENST00000496197 APPP05067 770 aa16.15■□□□□ 0.18
PTPN7-218ENST00000496197 PLCD1P51178 756 aa16.15■□□□□ 0.18
PTPN7-218ENST00000496197 NBPF12Q5TAG4 269 aaPredicted RBP16.15■□□□□ 0.18
PTPN7-218ENST00000496197 CASC1Q6TDU7 716 aa16.15■□□□□ 0.18
PTPN7-218ENST00000496197 DSCC1Q9BVC3 393 aa16.15■□□□□ 0.18
PTPN7-218ENST00000496197 ANO2Q9NQ90 1003 aa16.15■□□□□ 0.18
PTPN7-218ENST00000496197 MCM9Q9NXL9 1143 aa16.15■□□□□ 0.18
PTPN7-218ENST00000496197 FZD1Q9UP38 647 aa16.15■□□□□ 0.18
PTPN7-218ENST00000496197 ATAD5Q96QE3 1844 aa16.14■□□□□ 0.17
PTPN7-218ENST00000496197 USP17L12C9JPN9 530 aa16.14■□□□□ 0.17
PTPN7-218ENST00000496197 USP17L21D6R901 530 aa16.14■□□□□ 0.17
PTPN7-218ENST00000496197 MFAP1P55081 439 aaKnown RBP16.14■□□□□ 0.17
PTPN7-218ENST00000496197 TNFAIP1Q13829 316 aa16.14■□□□□ 0.17
PTPN7-218ENST00000496197 CHADLQ6NUI6 762 aa16.14■□□□□ 0.17
PTPN7-218ENST00000496197 SULF1Q8IWU6 871 aa16.14■□□□□ 0.17
PTPN7-218ENST00000496197 TACC3Q9Y6A5 838 aa16.14■□□□□ 0.17
PTPN7-218ENST00000496197 FAM196BA6NMK8 535 aa16.13■□□□□ 0.17
PTPN7-218ENST00000496197 ITGBL1O95965 494 aaPredicted RBP16.13■□□□□ 0.17
PTPN7-218ENST00000496197 TDO2P48775 406 aa16.13■□□□□ 0.17
PTPN7-218ENST00000496197 TNNI2P48788 182 aa16.13■□□□□ 0.17
PTPN7-218ENST00000496197 MAP4K1Q92918 833 aa16.13■□□□□ 0.17
PTPN7-218ENST00000496197 NBPF3Q9H094 633 aa16.13■□□□□ 0.17
PTPN7-218ENST00000496197 DNAJC18Q9H819 358 aa16.13■□□□□ 0.17
PTPN7-218ENST00000496197 TAF6LQ9Y6J9 622 aa16.13■□□□□ 0.17
PTPN7-218ENST00000496197 ALX1Q15699 326 aa16.12■□□□□ 0.17
PTPN7-218ENST00000496197 C12orf60Q5U649 245 aa16.12■□□□□ 0.17
PTPN7-218ENST00000496197 GIMAP6Q6P9H5 292 aa16.12■□□□□ 0.17
PTPN7-218ENST00000496197 CDC37L1Q7L3B6 337 aa16.12■□□□□ 0.17
PTPN7-218ENST00000496197 CDCA5Q96FF9 252 aa16.12■□□□□ 0.17
PTPN7-218ENST00000496197 NAPBQ9H115 298 aa16.12■□□□□ 0.17
PTPN7-218ENST00000496197 ZMYM6O95789 1325 aa16.12■□□□□ 0.17
PTPN7-218ENST00000496197 HAND2P61296 217 aa16.11■□□□□ 0.17
PTPN7-218ENST00000496197 ZSCAN29Q8IWY8 852 aaPredicted RBP16.11■□□□□ 0.17
PTPN7-218ENST00000496197 STK11IPQ8N1F8 1099 aa16.11■□□□□ 0.17
PTPN7-218ENST00000496197 DYNLL2Q96FJ2 89 aa16.11■□□□□ 0.17
PTPN7-218ENST00000496197 CSRNP1Q96S65 589 aa16.11■□□□□ 0.17
PTPN7-218ENST00000496197 ARPP21Q9UBL0 812 aaPredicted RBP16.11■□□□□ 0.17
PTPN7-218ENST00000496197 PPP2R3BQ9Y5P8 575 aa16.11■□□□□ 0.17
PTPN7-218ENST00000496197 RBM8AQ9Y5S9 174 aaKnown RBP16.11■□□□□ 0.17
PTPN7-218ENST00000496197 MINDY4BA8MYZ0 360 aa16.1■□□□□ 0.17
PTPN7-218ENST00000496197 POLR3DP05423 398 aaPredicted RBP16.1■□□□□ 0.17
PTPN7-218ENST00000496197 CTDSPL2Q05D32 466 aa16.1■□□□□ 0.17
PTPN7-218ENST00000496197 SBK1Q52WX2 424 aa16.1■□□□□ 0.17
PTPN7-218ENST00000496197 MIGA2Q7L4E1 593 aa16.1■□□□□ 0.17
PTPN7-218ENST00000496197 SLC44A5Q8NCS7 719 aa16.1■□□□□ 0.17
PTPN7-218ENST00000496197 NKX2-3Q8TAU0 364 aa16.1■□□□□ 0.17
PTPN7-218ENST00000496197 INCENPQ9NQS7 918 aa16.1■□□□□ 0.17
PTPN7-218ENST00000496197 ROBO3Q96MS0 1386 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms