RNA–Protein interactions for RNA: ENST00000495787.1

ECHDC3-204, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 3

Gene ECHDC3, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-204ENST00000495787 DCAF8Q5TAQ9 597 aa12.72□□□□□ -0.37
ECHDC3-204ENST00000495787 CYP4F22Q6NT55 531 aa12.72□□□□□ -0.37
ECHDC3-204ENST00000495787 GIMAP6Q6P9H5 292 aa12.72□□□□□ -0.37
ECHDC3-204ENST00000495787 DHX32Q7L7V1 743 aaKnown RBP12.72□□□□□ -0.37
ECHDC3-204ENST00000495787 INTS4Q96HW7 963 aaKnown RBP12.72□□□□□ -0.37
ECHDC3-204ENST00000495787 NAPBQ9H115 298 aa12.72□□□□□ -0.37
ECHDC3-204ENST00000495787 CWC22Q9HCG8 908 aaKnown RBP12.72□□□□□ -0.37
ECHDC3-204ENST00000495787 EPB41L4AQ9HCS5 686 aaPredicted RBP12.72□□□□□ -0.37
ECHDC3-204ENST00000495787 SUGT1Q9Y2Z0 365 aa12.72□□□□□ -0.37
ECHDC3-204ENST00000495787 GJA3Q9Y6H8 435 aa12.72□□□□□ -0.37
ECHDC3-204ENST00000495787 MAP2K2P36507 400 aa12.71□□□□□ -0.37
ECHDC3-204ENST00000495787 HAND2P61296 217 aa12.71□□□□□ -0.37
ECHDC3-204ENST00000495787 GTF2IP78347 998 aa12.71□□□□□ -0.37
ECHDC3-204ENST00000495787 EXOSC10Q01780 885 aaKnown RBP12.71□□□□□ -0.37
ECHDC3-204ENST00000495787 MFSD14BQ5SR56 506 aa12.71□□□□□ -0.37
ECHDC3-204ENST00000495787 NOL8Q76FK4 1167 aaKnown RBP12.71□□□□□ -0.37
ECHDC3-204ENST00000495787 PODNQ7Z5L7 613 aa12.71□□□□□ -0.37
ECHDC3-204ENST00000495787 SLF2Q8IX21 1173 aa12.71□□□□□ -0.37
ECHDC3-204ENST00000495787 CRNKL1Q9BZJ0 848 aaKnown RBP12.71□□□□□ -0.37
ECHDC3-204ENST00000495787 SH2B1Q9NRF2 756 aaPredicted RBP12.71□□□□□ -0.37
ECHDC3-204ENST00000495787 CA12O43570 354 aa12.7□□□□□ -0.38
ECHDC3-204ENST00000495787 TDO2P48775 406 aa12.7□□□□□ -0.38
ECHDC3-204ENST00000495787 SCNN1DP51172 638 aa12.7□□□□□ -0.38
ECHDC3-204ENST00000495787 PPP4CP60510 307 aa12.7□□□□□ -0.38
ECHDC3-204ENST00000495787 TOB2Q14106 344 aaPredicted RBP12.7□□□□□ -0.38
ECHDC3-204ENST00000495787 GRIK5Q16478 980 aa12.7□□□□□ -0.38
ECHDC3-204ENST00000495787 DOK7Q18PE1 504 aa12.7□□□□□ -0.38
ECHDC3-204ENST00000495787 USP50Q70EL3 339 aaPredicted RBP12.7□□□□□ -0.38
ECHDC3-204ENST00000495787 CERS3Q8IU89 383 aa12.7□□□□□ -0.38
ECHDC3-204ENST00000495787 NCOA7Q8NI08 942 aa12.7□□□□□ -0.38
ECHDC3-204ENST00000495787 FAM163AQ96GL9 167 aaPredicted RBP12.7□□□□□ -0.38
ECHDC3-204ENST00000495787 NOL10Q9BSC4 688 aaKnown RBP12.7□□□□□ -0.38
ECHDC3-204ENST00000495787 NBPF3Q9H094 633 aa12.7□□□□□ -0.38
ECHDC3-204ENST00000495787 FOXD4L1Q9NU39 408 aa12.7□□□□□ -0.38
ECHDC3-204ENST00000495787 AATFQ9NY61 560 aaKnown RBP eCLIP12.7□□□□□ -0.38
ECHDC3-204ENST00000495787 TLL2Q9Y6L7 1015 aa12.7□□□□□ -0.38
ECHDC3-204ENST00000495787 BAZ2AQ9UIF9 1905 aaKnown RBP12.7□□□□□ -0.38
ECHDC3-204ENST00000495787 MROH7-TTC4A0A0A0MT08 1334 aa12.69□□□□□ -0.38
ECHDC3-204ENST00000495787 WDR19Q8NEZ3 1342 aa12.69□□□□□ -0.38
ECHDC3-204ENST00000495787 BAG3O95817 575 aa12.69□□□□□ -0.38
ECHDC3-204ENST00000495787 FKBP1AP62942 108 aaKnown RBP12.69□□□□□ -0.38
ECHDC3-204ENST00000495787 KIAA2012Q0VF49 1180 aa12.69□□□□□ -0.38
ECHDC3-204ENST00000495787 TRDNQ13061 729 aa12.69□□□□□ -0.38
ECHDC3-204ENST00000495787 COL9A3Q14050 684 aaPredicted RBP12.69□□□□□ -0.38
ECHDC3-204ENST00000495787 CST9Q5W186 159 aa12.69□□□□□ -0.38
ECHDC3-204ENST00000495787 Q6ZUG5 572 aa12.69□□□□□ -0.38
ECHDC3-204ENST00000495787 RALYLQ86SE5 291 aaKnown RBP12.69□□□□□ -0.38
ECHDC3-204ENST00000495787 MB21D2Q8IYB1 491 aaPredicted RBP12.69□□□□□ -0.38
ECHDC3-204ENST00000495787 FBXL16Q8N461 479 aa12.69□□□□□ -0.38
ECHDC3-204ENST00000495787 TCEANC2Q96MN5 208 aa12.69□□□□□ -0.38
ECHDC3-204ENST00000495787 ATP8A2Q9NTI2 1148 aa12.69□□□□□ -0.38
ECHDC3-204ENST00000495787 TSKSQ9UJT2 592 aa12.69□□□□□ -0.38
ECHDC3-204ENST00000495787 ZNF646O15015 1829 aaPredicted RBP12.69□□□□□ -0.38
ECHDC3-204ENST00000495787 LAMB1P07942 1786 aa12.69□□□□□ -0.38
ECHDC3-204ENST00000495787 CDK5RAP2Q96SN8 1893 aa12.68□□□□□ -0.38
ECHDC3-204ENST00000495787 COL4A5P29400 1685 aa12.68□□□□□ -0.38
ECHDC3-204ENST00000495787 PSME4Q14997 1843 aa12.68□□□□□ -0.38
ECHDC3-204ENST00000495787 TRAF5O00463 557 aa12.68□□□□□ -0.38
ECHDC3-204ENST00000495787 MCM5P33992 734 aa12.68□□□□□ -0.38
ECHDC3-204ENST00000495787 EPS15P42566 896 aa12.68□□□□□ -0.38
ECHDC3-204ENST00000495787 FMR1Q06787 632 aaKnown RBP eCLIP12.68□□□□□ -0.38
ECHDC3-204ENST00000495787 TBC1D10CQ8IV04 446 aa12.68□□□□□ -0.38
ECHDC3-204ENST00000495787 LARGE2Q8N3Y3 721 aa12.68□□□□□ -0.38
ECHDC3-204ENST00000495787 SDR42E1Q8WUS8 393 aa12.68□□□□□ -0.38
ECHDC3-204ENST00000495787 FBXW7Q969H0 707 aa12.68□□□□□ -0.38
ECHDC3-204ENST00000495787 AGXT2Q9BYV1 514 aa12.68□□□□□ -0.38
ECHDC3-204ENST00000495787 VPS33BQ9H267 617 aa12.68□□□□□ -0.38
ECHDC3-204ENST00000495787 DBNDD1Q9H9R9 158 aa12.68□□□□□ -0.38
ECHDC3-204ENST00000495787 ANAPC4Q9UJX5 808 aa12.68□□□□□ -0.38
ECHDC3-204ENST00000495787 TPCN1Q9ULQ1 816 aa12.68□□□□□ -0.38
ECHDC3-204ENST00000495787 TRPM7Q96QT4 1865 aa12.68□□□□□ -0.38
ECHDC3-204ENST00000495787 GAKO14976 1311 aa12.67□□□□□ -0.38
ECHDC3-204ENST00000495787 SCN9AQ15858 1988 aa12.67□□□□□ -0.38
ECHDC3-204ENST00000495787 GPR75-ASB3A0A0A6YYF3 556 aa12.67□□□□□ -0.38
ECHDC3-204ENST00000495787 ECE2O60344 883 aa12.67□□□□□ -0.38
ECHDC3-204ENST00000495787 LARGE1O95461 756 aa12.67□□□□□ -0.38
ECHDC3-204ENST00000495787 PLCG2P16885 1265 aa12.67□□□□□ -0.38
ECHDC3-204ENST00000495787 FGD1P98174 961 aa12.67□□□□□ -0.38
ECHDC3-204ENST00000495787 PPARAQ07869 468 aa12.67□□□□□ -0.38
ECHDC3-204ENST00000495787 DIXDC1Q155Q3 683 aa12.67□□□□□ -0.38
ECHDC3-204ENST00000495787 ME3Q16798 604 aa12.67□□□□□ -0.38
ECHDC3-204ENST00000495787 AKNAD1Q5T1N1 836 aa12.67□□□□□ -0.38
ECHDC3-204ENST00000495787 STRIP1Q5VSL9 837 aa12.67□□□□□ -0.38
ECHDC3-204ENST00000495787 STAG1Q8WVM7 1258 aa12.67□□□□□ -0.38
ECHDC3-204ENST00000495787 HHIPL1Q96JK4 782 aa12.67□□□□□ -0.38
ECHDC3-204ENST00000495787 LARP6Q9BRS8 491 aaKnown RBP12.67□□□□□ -0.38
ECHDC3-204ENST00000495787 KRT23Q9C075 422 aa12.67□□□□□ -0.38
ECHDC3-204ENST00000495787 MCOLN1Q9GZU1 580 aa12.67□□□□□ -0.38
ECHDC3-204ENST00000495787 RNF41Q9H4P4 317 aaPredicted RBP12.67□□□□□ -0.38
ECHDC3-204ENST00000495787 CNNM2Q9H8M5 875 aa12.67□□□□□ -0.38
ECHDC3-204ENST00000495787 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.67□□□□□ -0.38
ECHDC3-204ENST00000495787 NAV1Q8NEY1 1877 aa12.66□□□□□ -0.38
ECHDC3-204ENST00000495787 PPIP5K2O43314 1243 aa12.66□□□□□ -0.38
ECHDC3-204ENST00000495787 PRC1O43663 620 aa12.66□□□□□ -0.38
ECHDC3-204ENST00000495787 AOC2O75106 756 aa12.66□□□□□ -0.38
ECHDC3-204ENST00000495787 BTDP43251 543 aa12.66□□□□□ -0.38
ECHDC3-204ENST00000495787 NUCB2P80303 420 aa12.66□□□□□ -0.38
ECHDC3-204ENST00000495787 CTDSPL2Q05D32 466 aa12.66□□□□□ -0.38
ECHDC3-204ENST00000495787 AOC3Q16853 763 aa12.66□□□□□ -0.38
ECHDC3-204ENST00000495787 SBK1Q52WX2 424 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms