RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 DDX4Q9NQI0 724 aaKnown RBP8.87□□□□□ -0.99
VPS52-221ENST00000495755 DBNLQ9UJU6 430 aaKnown RBP8.87□□□□□ -0.99
VPS52-221ENST00000495755 MYH2Q9UKX2 1941 aa8.86□□□□□ -0.99
VPS52-221ENST00000495755 DDTLA6NHG4 134 aaPredicted RBP8.86□□□□□ -0.99
VPS52-221ENST00000495755 CETPP11597 493 aa8.86□□□□□ -0.99
VPS52-221ENST00000495755 SNAPC2Q13487 334 aa8.86□□□□□ -0.99
VPS52-221ENST00000495755 TTC39AQ5SRH9 613 aa8.86□□□□□ -0.99
VPS52-221ENST00000495755 NOL9Q5SY16 702 aaKnown RBP8.86□□□□□ -0.99
VPS52-221ENST00000495755 FAM43AQ8N2R8 423 aa8.86□□□□□ -0.99
VPS52-221ENST00000495755 CCDC8Q9H0W5 538 aaPredicted RBP8.86□□□□□ -0.99
VPS52-221ENST00000495755 SNRKQ9NRH2 765 aa8.86□□□□□ -0.99
VPS52-221ENST00000495755 ZBTB40Q9NUA8 1239 aa8.86□□□□□ -0.99
VPS52-221ENST00000495755 TLR7Q9NYK1 1049 aaKnown RBP8.86□□□□□ -0.99
VPS52-221ENST00000495755 RAI14Q9P0K7 980 aa8.86□□□□□ -0.99
VPS52-221ENST00000495755 RCAN3Q9UKA8 241 aa8.86□□□□□ -0.99
VPS52-221ENST00000495755 HPS5Q9UPZ3 1129 aa8.86□□□□□ -0.99
VPS52-221ENST00000495755 BTBD19C9JJ37 291 aa8.85□□□□□ -0.99
VPS52-221ENST00000495755 IGSF3O75054 1194 aa8.85□□□□□ -0.99
VPS52-221ENST00000495755 CYP2E1P05181 493 aaPredicted RBP8.85□□□□□ -0.99
VPS52-221ENST00000495755 PPP4CP60510 307 aa8.85□□□□□ -0.99
VPS52-221ENST00000495755 MOGSQ13724 837 aa8.85□□□□□ -0.99
VPS52-221ENST00000495755 FBXO46Q6PJ61 603 aaPredicted RBP8.85□□□□□ -0.99
VPS52-221ENST00000495755 ERC1Q8IUD2 1116 aa8.85□□□□□ -0.99
VPS52-221ENST00000495755 SIRT2Q8IXJ6 389 aa8.85□□□□□ -0.99
VPS52-221ENST00000495755 RPAP2Q8IXW5 612 aaPredicted RBP8.85□□□□□ -0.99
VPS52-221ENST00000495755 ZCCHC17Q9NP64 241 aaKnown RBP8.85□□□□□ -0.99
VPS52-221ENST00000495755 LRP2BPQ9P2M1 347 aa8.85□□□□□ -0.99
VPS52-221ENST00000495755 DDX19BQ9UMR2 479 aa8.85□□□□□ -0.99
VPS52-221ENST00000495755 KCNH4Q9UQ05 1017 aa8.85□□□□□ -0.99
VPS52-221ENST00000495755 EXOC6BQ9Y2D4 811 aa8.85□□□□□ -0.99
VPS52-221ENST00000495755 COG6Q9Y2V7 657 aa8.85□□□□□ -0.99
VPS52-221ENST00000495755 TBC1D12O60347 775 aa8.84□□□□□ -0.99
VPS52-221ENST00000495755 SLURP2P0DP57 97 aa8.84□□□□□ -0.99
VPS52-221ENST00000495755 ZAP70P43403 619 aa8.84□□□□□ -0.99
VPS52-221ENST00000495755 CAP1Q01518 475 aa8.84□□□□□ -0.99
VPS52-221ENST00000495755 SP3Q02447 781 aa8.84□□□□□ -0.99
VPS52-221ENST00000495755 PICALMQ13492 652 aa8.84□□□□□ -0.99
VPS52-221ENST00000495755 TAF1CQ15572 869 aaPredicted RBP8.84□□□□□ -0.99
VPS52-221ENST00000495755 HSP90AB4PQ58FF6 505 aa8.84□□□□□ -0.99
VPS52-221ENST00000495755 NAA16Q6N069 864 aaPredicted RBP8.84□□□□□ -0.99
VPS52-221ENST00000495755 OTOP1Q7RTM1 612 aa8.84□□□□□ -0.99
VPS52-221ENST00000495755 ZSCAN29Q8IWY8 852 aaPredicted RBP8.84□□□□□ -0.99
VPS52-221ENST00000495755 SH3RF3Q8TEJ3 882 aaPredicted RBP8.84□□□□□ -0.99
VPS52-221ENST00000495755 ERO1AQ96HE7 468 aa8.84□□□□□ -0.99
VPS52-221ENST00000495755 ZFYVE28Q9HCC9 887 aa8.84□□□□□ -0.99
VPS52-221ENST00000495755 PIH1D3Q9NQM4 214 aaKnown RBP8.84□□□□□ -0.99
VPS52-221ENST00000495755 CXCL11O14625 94 aa8.83□□□□□ -1
VPS52-221ENST00000495755 TLR2O60603 784 aa8.83□□□□□ -1
VPS52-221ENST00000495755 CTNND1O60716 968 aaKnown RBP8.83□□□□□ -1
VPS52-221ENST00000495755 PTPRAP18433 802 aa8.83□□□□□ -1
VPS52-221ENST00000495755 MLLT1Q03111 559 aaPredicted RBP8.83□□□□□ -1
VPS52-221ENST00000495755 PDE3AQ14432 1141 aa8.83□□□□□ -1
VPS52-221ENST00000495755 C20orf194Q5TEA3 1177 aa8.83□□□□□ -1
VPS52-221ENST00000495755 ANKRD23Q86SG2 305 aa8.83□□□□□ -1
VPS52-221ENST00000495755 ADGRA1Q86SQ6 560 aa8.83□□□□□ -1
VPS52-221ENST00000495755 AACSQ86V21 672 aa8.83□□□□□ -1
VPS52-221ENST00000495755 TEX11Q8IYF3 940 aa8.83□□□□□ -1
VPS52-221ENST00000495755 SCYL3Q8IZE3 742 aa8.83□□□□□ -1
VPS52-221ENST00000495755 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.83□□□□□ -1
VPS52-221ENST00000495755 RHPN1Q8TCX5 695 aa8.83□□□□□ -1
VPS52-221ENST00000495755 CD99L2Q8TCZ2 262 aa8.83□□□□□ -1
VPS52-221ENST00000495755 OSBPL5Q9H0X9 879 aaPredicted RBP8.83□□□□□ -1
VPS52-221ENST00000495755 TRIM17Q9Y577 477 aa8.83□□□□□ -1
VPS52-221ENST00000495755 COL2A1P02458 1487 aaPredicted RBP8.83□□□□□ -1
VPS52-221ENST00000495755 AK9Q5TCS8 1911 aa8.82□□□□□ -1
VPS52-221ENST00000495755 BAG3O95817 575 aa8.82□□□□□ -1
VPS52-221ENST00000495755 PLCG2P16885 1265 aa8.82□□□□□ -1
VPS52-221ENST00000495755 SOX10P56693 466 aa8.82□□□□□ -1
VPS52-221ENST00000495755 GPAT2Q6NUI2 795 aa8.82□□□□□ -1
VPS52-221ENST00000495755 C17orf99Q6UX52 265 aa8.82□□□□□ -1
VPS52-221ENST00000495755 NOL10Q9BSC4 688 aaKnown RBP8.82□□□□□ -1
VPS52-221ENST00000495755 CHMP4BQ9H444 224 aaKnown RBP8.82□□□□□ -1
VPS52-221ENST00000495755 EFCC1Q9HA90 598 aa8.82□□□□□ -1
VPS52-221ENST00000495755 IL1RAPL2Q9NP60 686 aa8.82□□□□□ -1
VPS52-221ENST00000495755 PICK1Q9NRD5 415 aa8.82□□□□□ -1
VPS52-221ENST00000495755 AATFQ9NY61 560 aaKnown RBP eCLIP8.82□□□□□ -1
VPS52-221ENST00000495755 PTPN22Q9Y2R2 807 aa8.82□□□□□ -1
VPS52-221ENST00000495755 AFG3L2Q9Y4W6 797 aa8.82□□□□□ -1
VPS52-221ENST00000495755 ZHX2Q9Y6X8 837 aa8.82□□□□□ -1
VPS52-221ENST00000495755 MKI67P46013 3256 aaKnown RBP8.82□□□□□ -1
VPS52-221ENST00000495755 A0A0G2JLL6 359 aaPredicted RBP8.81□□□□□ -1
VPS52-221ENST00000495755 FAM196BA6NMK8 535 aa8.81□□□□□ -1
VPS52-221ENST00000495755 PDHXO00330 501 aa8.81□□□□□ -1
VPS52-221ENST00000495755 RAB11FIP3O75154 756 aa8.81□□□□□ -1
VPS52-221ENST00000495755 HMMRO75330 724 aa8.81□□□□□ -1
VPS52-221ENST00000495755 CYP7A1P22680 504 aa8.81□□□□□ -1
VPS52-221ENST00000495755 RRP1BQ14684 758 aaKnown RBP8.81□□□□□ -1
VPS52-221ENST00000495755 TMED8Q6PL24 325 aaPredicted RBP8.81□□□□□ -1
VPS52-221ENST00000495755 PRRT2Q7Z6L0 340 aaPredicted RBP8.81□□□□□ -1
VPS52-221ENST00000495755 METTL16Q86W50 562 aaKnown RBP8.81□□□□□ -1
VPS52-221ENST00000495755 CLASRPQ8N2M8 674 aaKnown RBP8.81□□□□□ -1
VPS52-221ENST00000495755 KIF1BPQ96EK5 621 aa8.81□□□□□ -1
VPS52-221ENST00000495755 DHX36Q9H2U1 1008 aaKnown RBP8.81□□□□□ -1
VPS52-221ENST00000495755 ANTXR1Q9H6X2 564 aa8.81□□□□□ -1
VPS52-221ENST00000495755 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.81□□□□□ -1
VPS52-221ENST00000495755 NDUFB9Q9Y6M9 179 aa8.81□□□□□ -1
VPS52-221ENST00000495755 DOCK2Q92608 1830 aa8.81□□□□□ -1
VPS52-221ENST00000495755 ADGRA2Q96PE1 1338 aa8.8□□□□□ -1
VPS52-221ENST00000495755 BRCA2P51587 3418 aa8.8□□□□□ -1
VPS52-221ENST00000495755 APBB1O00213 710 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms