RNA–Protein interactions for RNA: ENST00000495350.5

CBX1-205, Transcript of chromobox 1, humanhuman

TSL 2 BASIC

Gene CBX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-205ENST00000495350 ZSCAN29Q8IWY8 852 aaPredicted RBP7.75□□□□□ -1.17
CBX1-205ENST00000495350 WDR66Q8TBY9 1149 aa7.75□□□□□ -1.17
CBX1-205ENST00000495350 FAM161BQ96MY7 647 aa7.75□□□□□ -1.17
CBX1-205ENST00000495350 LRRFIP2Q9Y608 721 aaKnown RBP7.75□□□□□ -1.17
CBX1-205ENST00000495350 TTC28Q96AY4 2481 aa7.74□□□□□ -1.17
CBX1-205ENST00000495350 ALPK3Q96L96 1907 aa7.74□□□□□ -1.17
CBX1-205ENST00000495350 IFIT1P09914 478 aaKnown RBP7.74□□□□□ -1.17
CBX1-205ENST00000495350 PTPRAP18433 802 aa7.74□□□□□ -1.17
CBX1-205ENST00000495350 PABPC4Q13310 644 aaKnown RBP eCLIP7.74□□□□□ -1.17
CBX1-205ENST00000495350 EPHA10Q5JZY3 1008 aa7.74□□□□□ -1.17
CBX1-205ENST00000495350 CDC42EP5Q6NZY7 148 aa7.74□□□□□ -1.17
CBX1-205ENST00000495350 SYMPKQ92797 1274 aaKnown RBP7.74□□□□□ -1.17
CBX1-205ENST00000495350 GUCD1Q96NT3 240 aa7.74□□□□□ -1.17
CBX1-205ENST00000495350 PUS3Q9BZE2 481 aaKnown RBP7.74□□□□□ -1.17
CBX1-205ENST00000495350 AGTPBP1Q9UPW5 1226 aa7.74□□□□□ -1.17
CBX1-205ENST00000495350 F6X3S4 739 aa7.73□□□□□ -1.17
CBX1-205ENST00000495350 POTEB2H3BUK9 544 aa7.73□□□□□ -1.17
CBX1-205ENST00000495350 GCLCP48506 637 aaPredicted RBP7.73□□□□□ -1.17
CBX1-205ENST00000495350 NFIAQ12857 509 aa7.73□□□□□ -1.17
CBX1-205ENST00000495350 BEND3Q5T5X7 828 aa7.73□□□□□ -1.17
CBX1-205ENST00000495350 MAFAQ8NHW3 353 aaPredicted RBP7.73□□□□□ -1.17
CBX1-205ENST00000495350 USP40Q9NVE5 1235 aa7.73□□□□□ -1.17
CBX1-205ENST00000495350 PRKAG2Q9UGJ0 569 aa7.73□□□□□ -1.17
CBX1-205ENST00000495350 OGDHLQ9ULD0 1010 aa7.73□□□□□ -1.17
CBX1-205ENST00000495350 DAGLAQ9Y4D2 1042 aa7.73□□□□□ -1.17
CBX1-205ENST00000495350 AFG3L2Q9Y4W6 797 aa7.73□□□□□ -1.17
CBX1-205ENST00000495350 DDX60LQ5H9U9 1706 aaKnown RBP7.72□□□□□ -1.17
CBX1-205ENST00000495350 LAMA2P24043 3122 aaKnown RBP7.72□□□□□ -1.17
CBX1-205ENST00000495350 CTNND1O60716 968 aaKnown RBP7.72□□□□□ -1.17
CBX1-205ENST00000495350 ALDH1L1O75891 902 aa7.72□□□□□ -1.17
CBX1-205ENST00000495350 PDE8BO95263 885 aa7.72□□□□□ -1.17
CBX1-205ENST00000495350 LDHBP07195 334 aaKnown RBP7.72□□□□□ -1.17
CBX1-205ENST00000495350 PRKAR2AP13861 404 aaKnown RBP7.72□□□□□ -1.17
CBX1-205ENST00000495350 SLC5A1P13866 664 aa7.72□□□□□ -1.17
CBX1-205ENST00000495350 PDE3AQ14432 1141 aa7.72□□□□□ -1.17
CBX1-205ENST00000495350 PUM3Q15397 648 aaKnown RBP7.72□□□□□ -1.17
CBX1-205ENST00000495350 DIXDC1Q155Q3 683 aa7.72□□□□□ -1.17
CBX1-205ENST00000495350 SLC4A10Q6U841 1118 aa7.72□□□□□ -1.17
CBX1-205ENST00000495350 CCAR1Q8IX12 1150 aaKnown RBP7.72□□□□□ -1.17
CBX1-205ENST00000495350 PROCA1Q8NCQ7 364 aaPredicted RBP7.72□□□□□ -1.17
CBX1-205ENST00000495350 SOCS4Q8WXH5 440 aa7.72□□□□□ -1.17
CBX1-205ENST00000495350 SPINK5Q9NQ38 1064 aaPredicted RBP7.72□□□□□ -1.17
CBX1-205ENST00000495350 FAM198AQ9UFP1 575 aa7.72□□□□□ -1.17
CBX1-205ENST00000495350 PFASO15067 1338 aa7.72□□□□□ -1.17
CBX1-205ENST00000495350 KIF16BQ96L93 1317 aa7.72□□□□□ -1.17
CBX1-205ENST00000495350 VCANP13611 3396 aa7.71□□□□□ -1.17
CBX1-205ENST00000495350 DOCK3Q8IZD9 2030 aa7.71□□□□□ -1.17
CBX1-205ENST00000495350 PHF20L1A8MW92 1017 aa7.71□□□□□ -1.18
CBX1-205ENST00000495350 ENTPD3O75355 529 aa7.71□□□□□ -1.18
CBX1-205ENST00000495350 ZKSCAN1P17029 563 aaPredicted RBP7.71□□□□□ -1.18
CBX1-205ENST00000495350 CYP2B6P20813 491 aa7.71□□□□□ -1.18
CBX1-205ENST00000495350 COL9A1P20849 921 aa7.71□□□□□ -1.18
CBX1-205ENST00000495350 IRX3P78415 501 aaPredicted RBP7.71□□□□□ -1.18
CBX1-205ENST00000495350 TRIM32Q13049 653 aa7.71□□□□□ -1.18
CBX1-205ENST00000495350 TRMT44Q8IYL2 757 aaKnown RBP7.71□□□□□ -1.18
CBX1-205ENST00000495350 TRIB2Q92519 343 aa7.71□□□□□ -1.18
CBX1-205ENST00000495350 SUCLG2Q96I99 432 aa7.71□□□□□ -1.18
CBX1-205ENST00000495350 NUDT12Q9BQG2 462 aa7.71□□□□□ -1.18
CBX1-205ENST00000495350 SRCIN1Q9C0H9 1055 aa7.71□□□□□ -1.18
CBX1-205ENST00000495350 CWC22Q9HCG8 908 aaKnown RBP7.71□□□□□ -1.18
CBX1-205ENST00000495350 GNL3LQ9NVN8 582 aaKnown RBP7.71□□□□□ -1.18
CBX1-205ENST00000495350 PRUNE2Q8WUY3 3088 aa7.71□□□□□ -1.18
CBX1-205ENST00000495350 CACNA1FO60840 1977 aa7.7□□□□□ -1.18
CBX1-205ENST00000495350 FOSL2P15408 326 aa7.7□□□□□ -1.18
CBX1-205ENST00000495350 PRDX5P30044 214 aa7.7□□□□□ -1.18
CBX1-205ENST00000495350 RGS3P49796 1198 aa7.7□□□□□ -1.18
CBX1-205ENST00000495350 LRRC26Q2I0M4 334 aa7.7□□□□□ -1.18
CBX1-205ENST00000495350 LRRC24Q50LG9 513 aa7.7□□□□□ -1.18
CBX1-205ENST00000495350 TREML2Q5T2D2 321 aa7.7□□□□□ -1.18
CBX1-205ENST00000495350 SLF2Q8IX21 1173 aa7.7□□□□□ -1.18
CBX1-205ENST00000495350 ZGPATQ8N5A5 531 aaKnown RBP7.7□□□□□ -1.18
CBX1-205ENST00000495350 CDX2Q99626 313 aaPredicted RBP7.7□□□□□ -1.18
CBX1-205ENST00000495350 TBC1D2Q9BYX2 928 aa7.7□□□□□ -1.18
CBX1-205ENST00000495350 IL16Q14005 1332 aa7.7□□□□□ -1.18
CBX1-205ENST00000495350 DOCK2Q92608 1830 aa7.69□□□□□ -1.18
CBX1-205ENST00000495350 XRCC5P13010 732 aaKnown RBP7.69□□□□□ -1.18
CBX1-205ENST00000495350 HMGCS2P54868 508 aa7.69□□□□□ -1.18
CBX1-205ENST00000495350 SPP2Q13103 211 aa7.69□□□□□ -1.18
CBX1-205ENST00000495350 DDX10Q13206 875 aaKnown RBP7.69□□□□□ -1.18
CBX1-205ENST00000495350 PICALMQ13492 652 aa7.69□□□□□ -1.18
CBX1-205ENST00000495350 CCDC27Q2M243 656 aa7.69□□□□□ -1.18
CBX1-205ENST00000495350 MAP3K21Q5TCX8 1036 aa7.69□□□□□ -1.18
CBX1-205ENST00000495350 CCDC84Q86UT8 332 aaPredicted RBP7.69□□□□□ -1.18
CBX1-205ENST00000495350 DZIP1Q86YF9 867 aaKnown RBP7.69□□□□□ -1.18
CBX1-205ENST00000495350 WWC1Q8IX03 1113 aa7.69□□□□□ -1.18
CBX1-205ENST00000495350 ZFPM1Q8IX07 1006 aa7.69□□□□□ -1.18
CBX1-205ENST00000495350 VGLL2Q8N8G2 317 aa7.69□□□□□ -1.18
CBX1-205ENST00000495350 ZNF280CQ8ND82 737 aa7.69□□□□□ -1.18
CBX1-205ENST00000495350 LPIN2Q92539 896 aa7.69□□□□□ -1.18
CBX1-205ENST00000495350 IDI2Q9BXS1 227 aa7.69□□□□□ -1.18
CBX1-205ENST00000495350 SENP6Q9GZR1 1112 aaPredicted RBP7.69□□□□□ -1.18
CBX1-205ENST00000495350 ASCC2Q9H1I8 757 aaPredicted RBP7.69□□□□□ -1.18
CBX1-205ENST00000495350 BICC1Q9H694 974 aaKnown RBP7.69□□□□□ -1.18
CBX1-205ENST00000495350 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.69□□□□□ -1.18
CBX1-205ENST00000495350 GJD2Q9UKL4 321 aa7.69□□□□□ -1.18
CBX1-205ENST00000495350 FANCIQ9NVI1 1328 aa7.69□□□□□ -1.18
CBX1-205ENST00000495350 ATRNL1Q5VV63 1379 aa7.69□□□□□ -1.18
CBX1-205ENST00000495350 EYSQ5T1H1 3165 aa7.69□□□□□ -1.18
CBX1-205ENST00000495350 COL2A1P02458 1487 aaPredicted RBP7.68□□□□□ -1.18
CBX1-205ENST00000495350 DOCK1Q14185 1865 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms