RNA–Protein interactions for RNA: ENST00000494977.1

FGD4-208, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 2

Gene FGD4, Length 2,349 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-208ENST00000494977 SMYD1Q8NB12 490 aa7.11□□□□□ -1.27
FGD4-208ENST00000494977 COG1Q8WTW3 980 aa7.11□□□□□ -1.27
FGD4-208ENST00000494977 KIFC2Q96AC6 838 aa7.11□□□□□ -1.27
FGD4-208ENST00000494977 WDR24Q96S15 920 aa7.11□□□□□ -1.27
FGD4-208ENST00000494977 MPHOSPH6Q99547 160 aaKnown RBP7.11□□□□□ -1.27
FGD4-208ENST00000494977 SH3GL2Q99962 352 aa7.11□□□□□ -1.27
FGD4-208ENST00000494977 TRAIPQ9BWF2 469 aa7.11□□□□□ -1.27
FGD4-208ENST00000494977 UPF3BQ9BZI7 483 aaKnown RBP7.11□□□□□ -1.27
FGD4-208ENST00000494977 ZSWIM4Q9H7M6 989 aa7.11□□□□□ -1.27
FGD4-208ENST00000494977 NOP53Q9NZM5 478 aaKnown RBP7.11□□□□□ -1.27
FGD4-208ENST00000494977 ABCF2Q9UG63 623 aa7.11□□□□□ -1.27
FGD4-208ENST00000494977 STAG3Q9UJ98 1225 aa7.11□□□□□ -1.27
FGD4-208ENST00000494977 PHF24Q9UPV7 400 aa7.11□□□□□ -1.27
FGD4-208ENST00000494977 MTMR6Q9Y217 621 aa7.11□□□□□ -1.27
FGD4-208ENST00000494977 ZNF510Q9Y2H8 683 aa7.11□□□□□ -1.27
FGD4-208ENST00000494977 LRRIQ1Q96JM4 1722 aa7.11□□□□□ -1.27
FGD4-208ENST00000494977 ATP6V1G2O95670 118 aa7.11□□□□□ -1.27
FGD4-208ENST00000494977 PARP1P09874 1014 aaKnown RBP7.11□□□□□ -1.27
FGD4-208ENST00000494977 RHOXF2BP0C7M4 288 aa7.11□□□□□ -1.27
FGD4-208ENST00000494977 EXOSC9Q06265 439 aaKnown RBP7.11□□□□□ -1.27
FGD4-208ENST00000494977 ACCSLQ4AC99 568 aa7.11□□□□□ -1.27
FGD4-208ENST00000494977 ATP11CQ8NB49 1132 aa7.11□□□□□ -1.27
FGD4-208ENST00000494977 CCDC148Q8NFR7 591 aa7.11□□□□□ -1.27
FGD4-208ENST00000494977 P3H4Q92791 437 aa7.11□□□□□ -1.27
FGD4-208ENST00000494977 ANKRD27Q96NW4 1050 aa7.11□□□□□ -1.27
FGD4-208ENST00000494977 RHOXF2Q9BQY4 288 aa7.11□□□□□ -1.27
FGD4-208ENST00000494977 MTA3Q9BTC8 594 aa7.11□□□□□ -1.27
FGD4-208ENST00000494977 NACA2Q9H009 215 aa7.11□□□□□ -1.27
FGD4-208ENST00000494977 NOD2Q9HC29 1040 aa7.11□□□□□ -1.27
FGD4-208ENST00000494977 PUF60Q9UHX1 559 aaKnown RBP7.11□□□□□ -1.27
FGD4-208ENST00000494977 ITGB1BP2Q9UKP3 347 aa7.11□□□□□ -1.27
FGD4-208ENST00000494977 LIMCH1Q9UPQ0 1083 aa7.11□□□□□ -1.27
FGD4-208ENST00000494977 THRAP3Q9Y2W1 955 aaKnown RBP7.11□□□□□ -1.27
FGD4-208ENST00000494977 CDC42BPAQ5VT25 1732 aa7.11□□□□□ -1.27
FGD4-208ENST00000494977 VPS37CA5D8V6 355 aaPredicted RBP7.1□□□□□ -1.27
FGD4-208ENST00000494977 ANP32DO95626 131 aa7.1□□□□□ -1.27
FGD4-208ENST00000494977 CCDC175P0C221 793 aa7.1□□□□□ -1.27
FGD4-208ENST00000494977 HARSP12081 509 aaKnown RBP7.1□□□□□ -1.27
FGD4-208ENST00000494977 GGCXP38435 758 aa7.1□□□□□ -1.27
FGD4-208ENST00000494977 PSMD7P51665 324 aa7.1□□□□□ -1.27
FGD4-208ENST00000494977 PSMC1P62191 440 aaKnown RBP7.1□□□□□ -1.27
FGD4-208ENST00000494977 MXRA7P84157 204 aa7.1□□□□□ -1.27
FGD4-208ENST00000494977 XRCC4Q13426 336 aa7.1□□□□□ -1.27
FGD4-208ENST00000494977 POSTNQ15063 836 aa7.1□□□□□ -1.27
FGD4-208ENST00000494977 MSL1Q68DK7 614 aa7.1□□□□□ -1.27
FGD4-208ENST00000494977 SYNE3Q6ZMZ3 975 aa7.1□□□□□ -1.27
FGD4-208ENST00000494977 CCAR1Q8IX12 1150 aaKnown RBP7.1□□□□□ -1.27
FGD4-208ENST00000494977 AOPEPQ8N6M6 819 aa7.1□□□□□ -1.27
FGD4-208ENST00000494977 TEKT4Q8WW24 435 aa7.1□□□□□ -1.27
FGD4-208ENST00000494977 DHRS1Q96LJ7 313 aa7.1□□□□□ -1.27
FGD4-208ENST00000494977 NUP58Q9BVL2 599 aa7.1□□□□□ -1.27
FGD4-208ENST00000494977 MOV10L1Q9BXT6 1211 aaKnown RBP7.1□□□□□ -1.27
FGD4-208ENST00000494977 XPO4Q9C0E2 1151 aaKnown RBP7.1□□□□□ -1.27
FGD4-208ENST00000494977 EPN3Q9H201 632 aa7.1□□□□□ -1.27
FGD4-208ENST00000494977 ZNHIT6Q9NWK9 470 aaKnown RBP7.1□□□□□ -1.27
FGD4-208ENST00000494977 AATFQ9NY61 560 aaKnown RBP eCLIP7.1□□□□□ -1.27
FGD4-208ENST00000494977 PAIP2BQ9ULR5 123 aaKnown RBP7.1□□□□□ -1.27
FGD4-208ENST00000494977 ABCC10Q5T3U5 1492 aa7.1□□□□□ -1.27
FGD4-208ENST00000494977 PDS5BQ9NTI5 1447 aa7.1□□□□□ -1.27
FGD4-208ENST00000494977 EIF2AK4Q9P2K8 1649 aaKnown RBP7.1□□□□□ -1.27
FGD4-208ENST00000494977 SRRM3A6NNA2 597 aaPredicted RBP7.1□□□□□ -1.27
FGD4-208ENST00000494977 CBFA2T2O43439 604 aa7.1□□□□□ -1.27
FGD4-208ENST00000494977 NR1I2O75469 434 aa7.1□□□□□ -1.27
FGD4-208ENST00000494977 KRT38O76015 456 aa7.1□□□□□ -1.27
FGD4-208ENST00000494977 NPTXRO95502 500 aa7.1□□□□□ -1.27
FGD4-208ENST00000494977 PENKP01210 267 aaPredicted RBP7.1□□□□□ -1.27
FGD4-208ENST00000494977 PDCP20941 246 aa7.1□□□□□ -1.27
FGD4-208ENST00000494977 GJB2P29033 226 aa7.1□□□□□ -1.27
FGD4-208ENST00000494977 SPECC1Q5M775 1068 aa7.1□□□□□ -1.27
FGD4-208ENST00000494977 TMEM110Q86TL2 294 aa7.1□□□□□ -1.27
FGD4-208ENST00000494977 OPTNQ96CV9 577 aa7.1□□□□□ -1.27
FGD4-208ENST00000494977 STAMBPL1Q96FJ0 436 aa7.1□□□□□ -1.27
FGD4-208ENST00000494977 RABEP2Q9H5N1 569 aa7.1□□□□□ -1.27
FGD4-208ENST00000494977 DCTPP1Q9H773 170 aa7.1□□□□□ -1.27
FGD4-208ENST00000494977 IFNKQ9P0W0 207 aa7.1□□□□□ -1.27
FGD4-208ENST00000494977 WDR35Q9P2L0 1181 aa7.1□□□□□ -1.27
FGD4-208ENST00000494977 ATXN10Q9UBB4 475 aa7.1□□□□□ -1.27
FGD4-208ENST00000494977 BAIAP2L1Q9UHR4 511 aa7.1□□□□□ -1.27
FGD4-208ENST00000494977 MAPK8IP1Q9UQF2 711 aa7.1□□□□□ -1.27
FGD4-208ENST00000494977 FANCAO15360 1455 aa7.09□□□□□ -1.27
FGD4-208ENST00000494977 LRRC10BA6NIK2 292 aa7.09□□□□□ -1.27
FGD4-208ENST00000494977 CYP27B1O15528 508 aa7.09□□□□□ -1.27
FGD4-208ENST00000494977 VIMP08670 466 aaKnown RBP7.09□□□□□ -1.27
FGD4-208ENST00000494977 RIPK1Q13546 671 aa7.09□□□□□ -1.27
FGD4-208ENST00000494977 PPP1R15BQ5SWA1 713 aa7.09□□□□□ -1.27
FGD4-208ENST00000494977 NAA35Q5VZE5 725 aa7.09□□□□□ -1.27
FGD4-208ENST00000494977 NME8Q8N427 588 aa7.09□□□□□ -1.27
FGD4-208ENST00000494977 WHAMMQ8TF30 809 aa7.09□□□□□ -1.27
FGD4-208ENST00000494977 MAIP1Q8WWC4 291 aa7.09□□□□□ -1.27
FGD4-208ENST00000494977 TTC14Q96N46 770 aa7.09□□□□□ -1.27
FGD4-208ENST00000494977 ESYT1Q9BSJ8 1104 aa7.09□□□□□ -1.27
FGD4-208ENST00000494977 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.09□□□□□ -1.27
FGD4-208ENST00000494977 OSBPL1AQ9BXW6 950 aa7.09□□□□□ -1.27
FGD4-208ENST00000494977 HAUS2Q9NVX0 235 aa7.09□□□□□ -1.27
FGD4-208ENST00000494977 TMCO1Q9UM00 188 aa7.09□□□□□ -1.27
FGD4-208ENST00000494977 BARX2Q9UMQ3 279 aaPredicted RBP7.09□□□□□ -1.27
FGD4-208ENST00000494977 ABCC5O15440 1437 aa7.09□□□□□ -1.28
FGD4-208ENST00000494977 MBD4O95243 580 aa7.09□□□□□ -1.28
FGD4-208ENST00000494977 XBP1P17861 261 aa7.09□□□□□ -1.28
FGD4-208ENST00000494977 TRPC1P48995 793 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms