RNA–Protein interactions for RNA: ENST00000494647.2

NDFIP2-204, Transcript of Nedd4 family interacting protein 2, humanhuman

TSL 5

Gene NDFIP2, Length 344 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-204ENST00000494647 PDZD3Q86UT5 571 aa6.4□□□□□ -1.38
NDFIP2-204ENST00000494647 C3orf58Q8NDZ4 430 aa6.4□□□□□ -1.38
NDFIP2-204ENST00000494647 FANCD2OSQ96PS1 177 aa6.4□□□□□ -1.38
NDFIP2-204ENST00000494647 SRCIN1Q9C0H9 1055 aa6.4□□□□□ -1.38
NDFIP2-204ENST00000494647 LRRC4CQ9HCJ2 640 aa6.4□□□□□ -1.38
NDFIP2-204ENST00000494647 RSF1Q96T23 1441 aaPredicted RBP6.4□□□□□ -1.39
NDFIP2-204ENST00000494647 AQRO60306 1485 aaKnown RBP eCLIP6.4□□□□□ -1.39
NDFIP2-204ENST00000494647 ARAP1Q96P48 1450 aa6.4□□□□□ -1.39
NDFIP2-204ENST00000494647 PATL2C9JE40 543 aaKnown RBP6.39□□□□□ -1.39
NDFIP2-204ENST00000494647 NME2P22392 152 aa6.39□□□□□ -1.39
NDFIP2-204ENST00000494647 ARNTP27540 789 aa6.39□□□□□ -1.39
NDFIP2-204ENST00000494647 MAP1SQ66K74 1059 aaPredicted RBP6.39□□□□□ -1.39
NDFIP2-204ENST00000494647 SEZ6L2Q6UXD5 910 aa6.39□□□□□ -1.39
NDFIP2-204ENST00000494647 VSIG10LQ86VR7 867 aa6.39□□□□□ -1.39
NDFIP2-204ENST00000494647 SETDB2Q96T68 719 aa6.39□□□□□ -1.39
NDFIP2-204ENST00000494647 EMILIN2Q9BXX0 1053 aa6.39□□□□□ -1.39
NDFIP2-204ENST00000494647 C1GALT1Q9NS00 363 aa6.39□□□□□ -1.39
NDFIP2-204ENST00000494647 PCDHGC5Q9Y5F6 944 aa6.39□□□□□ -1.39
NDFIP2-204ENST00000494647 TPTE2Q6XPS3 522 aa6.38□□□□□ -1.39
NDFIP2-204ENST00000494647 SMYD4Q8IYR2 804 aaPredicted RBP6.38□□□□□ -1.39
NDFIP2-204ENST00000494647 STK35Q8TDR2 534 aa6.38□□□□□ -1.39
NDFIP2-204ENST00000494647 ACSBG1Q96GR2 724 aa6.38□□□□□ -1.39
NDFIP2-204ENST00000494647 TRAIPQ9BWF2 469 aa6.38□□□□□ -1.39
NDFIP2-204ENST00000494647 CEP44Q9C0F1 390 aa6.38□□□□□ -1.39
NDFIP2-204ENST00000494647 CBX8Q9HC52 389 aa6.38□□□□□ -1.39
NDFIP2-204ENST00000494647 DISC1Q9NRI5 854 aa6.38□□□□□ -1.39
NDFIP2-204ENST00000494647 BSDC1Q9NW68 430 aaPredicted RBP6.38□□□□□ -1.39
NDFIP2-204ENST00000494647 CCDC39Q9UFE4 941 aa6.38□□□□□ -1.39
NDFIP2-204ENST00000494647 PPM1HQ9ULR3 514 aa6.38□□□□□ -1.39
NDFIP2-204ENST00000494647 SPG7Q9UQ90 795 aa6.38□□□□□ -1.39
NDFIP2-204ENST00000494647 COL17A1Q9UMD9 1497 aaPredicted RBP6.38□□□□□ -1.39
NDFIP2-204ENST00000494647 CHD1O14646 1710 aa6.38□□□□□ -1.39
NDFIP2-204ENST00000494647 EIF4G3O43432 1585 aaKnown RBP6.37□□□□□ -1.39
NDFIP2-204ENST00000494647 GIPC1O14908 333 aa6.37□□□□□ -1.39
NDFIP2-204ENST00000494647 RNGTTO60942 597 aaKnown RBP6.37□□□□□ -1.39
NDFIP2-204ENST00000494647 PRNPP04156 253 aa6.37□□□□□ -1.39
NDFIP2-204ENST00000494647 HCLS1P14317 486 aaPredicted RBP6.37□□□□□ -1.39
NDFIP2-204ENST00000494647 CDK5R2Q13319 367 aa6.37□□□□□ -1.39
NDFIP2-204ENST00000494647 TTLL4Q14679 1199 aa6.37□□□□□ -1.39
NDFIP2-204ENST00000494647 CYP27C1Q4G0S4 372 aa6.37□□□□□ -1.39
NDFIP2-204ENST00000494647 OGFOD3Q6PK18 319 aa6.37□□□□□ -1.39
NDFIP2-204ENST00000494647 NECAB3Q96P71 396 aaPredicted RBP6.37□□□□□ -1.39
NDFIP2-204ENST00000494647 OSBPL7Q9BZF2 842 aa6.37□□□□□ -1.39
NDFIP2-204ENST00000494647 WWC3Q9ULE0 1092 aa6.37□□□□□ -1.39
NDFIP2-204ENST00000494647 SAMM50Q9Y512 469 aa6.37□□□□□ -1.39
NDFIP2-204ENST00000494647 TOP2AP11388 1531 aaKnown RBP6.36□□□□□ -1.39
NDFIP2-204ENST00000494647 TOPBP1Q92547 1522 aa6.36□□□□□ -1.39
NDFIP2-204ENST00000494647 CCDC88BA6NC98 1476 aa6.36□□□□□ -1.39
NDFIP2-204ENST00000494647 FBXO24O75426 580 aa6.36□□□□□ -1.39
NDFIP2-204ENST00000494647 P4HBP07237 508 aaKnown RBP6.36□□□□□ -1.39
NDFIP2-204ENST00000494647 GPBAR1Q8TDU6 330 aa6.36□□□□□ -1.39
NDFIP2-204ENST00000494647 FBXL18Q96ME1 805 aa6.36□□□□□ -1.39
NDFIP2-204ENST00000494647 ZC3H7BQ9UGR2 993 aaKnown RBP6.36□□□□□ -1.39
NDFIP2-204ENST00000494647 IFT140Q96RY7 1462 aa6.35□□□□□ -1.39
NDFIP2-204ENST00000494647 ENC1O14682 589 aa6.35□□□□□ -1.39
NDFIP2-204ENST00000494647 FAM87AP0C7U9 286 aa6.35□□□□□ -1.39
NDFIP2-204ENST00000494647 ZNF252P-AS1Q0IIN9 211 aa6.35□□□□□ -1.39
NDFIP2-204ENST00000494647 TP53INP2Q8IXH6 220 aa6.35□□□□□ -1.39
NDFIP2-204ENST00000494647 ABI1Q8IZP0 508 aa6.35□□□□□ -1.39
NDFIP2-204ENST00000494647 C12orf49Q9H741 205 aa6.35□□□□□ -1.39
NDFIP2-204ENST00000494647 SSU72Q9NP77 194 aaKnown RBP6.35□□□□□ -1.39
NDFIP2-204ENST00000494647 RAD54L2Q9Y4B4 1467 aa6.34□□□□□ -1.39
NDFIP2-204ENST00000494647 PAX4O43316 350 aa6.34□□□□□ -1.39
NDFIP2-204ENST00000494647 PAGE1O75459 146 aa6.34□□□□□ -1.39
NDFIP2-204ENST00000494647 LDHBP07195 334 aaKnown RBP6.34□□□□□ -1.39
NDFIP2-204ENST00000494647 NEFMP07197 916 aa6.34□□□□□ -1.39
NDFIP2-204ENST00000494647 TAL1P17542 331 aaPredicted RBP6.34□□□□□ -1.39
NDFIP2-204ENST00000494647 ERVK-24P63145 666 aa6.34□□□□□ -1.39
NDFIP2-204ENST00000494647 ZC3H12AQ5D1E8 599 aaKnown RBP6.34□□□□□ -1.39
NDFIP2-204ENST00000494647 FLCNQ8NFG4 579 aa6.34□□□□□ -1.39
NDFIP2-204ENST00000494647 ISL2Q96A47 359 aa6.34□□□□□ -1.39
NDFIP2-204ENST00000494647 FAM8A1Q9UBU6 413 aa6.34□□□□□ -1.39
NDFIP2-204ENST00000494647 PCOLCE2Q9UKZ9 415 aa6.34□□□□□ -1.39
NDFIP2-204ENST00000494647 TDRD9Q8NDG6 1382 aaKnown RBP6.33□□□□□ -1.4
NDFIP2-204ENST00000494647 USP17L7P0C7H9 530 aa6.33□□□□□ -1.4
NDFIP2-204ENST00000494647 LLGL2Q6P1M3 1020 aa6.33□□□□□ -1.4
NDFIP2-204ENST00000494647 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.33□□□□□ -1.4
NDFIP2-204ENST00000494647 RNF214Q8ND24 703 aa6.33□□□□□ -1.4
NDFIP2-204ENST00000494647 PICK1Q9NRD5 415 aa6.33□□□□□ -1.4
NDFIP2-204ENST00000494647 ADGRE2Q9UHX3 823 aa6.33□□□□□ -1.4
NDFIP2-204ENST00000494647 TARBP1Q13395 1621 aaKnown RBP6.32□□□□□ -1.4
NDFIP2-204ENST00000494647 TRIM37O94972 964 aa6.32□□□□□ -1.4
NDFIP2-204ENST00000494647 BMP6P22004 513 aa6.32□□□□□ -1.4
NDFIP2-204ENST00000494647 LRRC14Q15048 493 aa6.32□□□□□ -1.4
NDFIP2-204ENST00000494647 MPRIPQ6WCQ1 1025 aa6.32□□□□□ -1.4
NDFIP2-204ENST00000494647 NFXL1Q6ZNB6 911 aa6.32□□□□□ -1.4
NDFIP2-204ENST00000494647 AGBL5Q8NDL9 886 aa6.32□□□□□ -1.4
NDFIP2-204ENST00000494647 GRIN3AQ8TCU5 1115 aa6.32□□□□□ -1.4
NDFIP2-204ENST00000494647 ANKRD24Q8TF21 1146 aa6.32□□□□□ -1.4
NDFIP2-204ENST00000494647 FRMD6Q96NE9 622 aa6.32□□□□□ -1.4
NDFIP2-204ENST00000494647 KRTAP9-2Q9BYQ4 174 aa6.32□□□□□ -1.4
NDFIP2-204ENST00000494647 CACNA2D2Q9NY47 1150 aa6.32□□□□□ -1.4
NDFIP2-204ENST00000494647 TTF2Q9UNY4 1162 aaKnown RBP6.32□□□□□ -1.4
NDFIP2-204ENST00000494647 PRDM2Q13029 1718 aa6.31□□□□□ -1.4
NDFIP2-204ENST00000494647 DCDC2CA8MYV0 355 aa6.31□□□□□ -1.4
NDFIP2-204ENST00000494647 CELA3AP09093 270 aa6.31□□□□□ -1.4
NDFIP2-204ENST00000494647 PPM1JQ5JR12 505 aa6.31□□□□□ -1.4
NDFIP2-204ENST00000494647 PCNX4Q63HM2 1172 aa6.31□□□□□ -1.4
NDFIP2-204ENST00000494647 ARHGAP27Q6ZUM4 889 aa6.31□□□□□ -1.4
NDFIP2-204ENST00000494647 STK11IPQ8N1F8 1099 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms