RNA–Protein interactions for RNA: ENST00000494573.6

LDHA-211, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,154 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-211ENST00000494573 KCNG4Q8TDN1 519 aa13.06□□□□□ -0.32
LDHA-211ENST00000494573 ALG1Q9BT22 464 aa13.06□□□□□ -0.32
LDHA-211ENST00000494573 CCNL1Q9UK58 526 aaPredicted RBP13.06□□□□□ -0.32
LDHA-211ENST00000494573 USP21Q9UK80 565 aa13.06□□□□□ -0.32
LDHA-211ENST00000494573 RTCBQ9Y3I0 505 aaKnown RBP13.06□□□□□ -0.32
LDHA-211ENST00000494573 SPDYE4A6NLX3 237 aa13.05□□□□□ -0.32
LDHA-211ENST00000494573 PRKAB2O43741 272 aa13.05□□□□□ -0.32
LDHA-211ENST00000494573 TPM3P06753 285 aa13.05□□□□□ -0.32
LDHA-211ENST00000494573 GYG1P46976 350 aa13.05□□□□□ -0.32
LDHA-211ENST00000494573 RPS8P62241 208 aaKnown RBP13.05□□□□□ -0.32
LDHA-211ENST00000494573 CEBPZQ03701 1054 aaKnown RBP13.05□□□□□ -0.32
LDHA-211ENST00000494573 PPARAQ07869 468 aa13.05□□□□□ -0.32
LDHA-211ENST00000494573 STK38Q15208 465 aa13.05□□□□□ -0.32
LDHA-211ENST00000494573 NTRK3Q16288 839 aa13.05□□□□□ -0.32
LDHA-211ENST00000494573 ADALQ6DHV7 355 aa13.05□□□□□ -0.32
LDHA-211ENST00000494573 CHADLQ6NUI6 762 aa13.05□□□□□ -0.32
LDHA-211ENST00000494573 TPTE2Q6XPS3 522 aa13.05□□□□□ -0.32
LDHA-211ENST00000494573 SYNE3Q6ZMZ3 975 aa13.05□□□□□ -0.32
LDHA-211ENST00000494573 BICDL1Q6ZP65 573 aa13.05□□□□□ -0.32
LDHA-211ENST00000494573 NBPF5PQ86XG9 351 aaPredicted RBP13.05□□□□□ -0.32
LDHA-211ENST00000494573 LINC00301Q8NCQ3 95 aa13.05□□□□□ -0.32
LDHA-211ENST00000494573 TDRD7Q8NHU6 1098 aaKnown RBP13.05□□□□□ -0.32
LDHA-211ENST00000494573 NKX2-3Q8TAU0 364 aa13.05□□□□□ -0.32
LDHA-211ENST00000494573 WASF1Q92558 559 aa13.05□□□□□ -0.32
LDHA-211ENST00000494573 CELF1Q92879 486 aaKnown RBP13.05□□□□□ -0.32
LDHA-211ENST00000494573 FAM84BQ96KN1 310 aaPredicted RBP13.05□□□□□ -0.32
LDHA-211ENST00000494573 BRIP1Q9BX63 1249 aa13.05□□□□□ -0.32
LDHA-211ENST00000494573 GOLPH3LQ9H4A5 285 aa13.05□□□□□ -0.32
LDHA-211ENST00000494573 RAI14Q9P0K7 980 aa13.05□□□□□ -0.32
LDHA-211ENST00000494573 ZSWIM5Q9P217 1185 aa13.05□□□□□ -0.32
LDHA-211ENST00000494573 TACC3Q9Y6A5 838 aa13.05□□□□□ -0.32
LDHA-211ENST00000494573 ERICH2A1L162 156 aa13.04□□□□□ -0.32
LDHA-211ENST00000494573 GNPATO15228 680 aa13.04□□□□□ -0.32
LDHA-211ENST00000494573 KINO60870 393 aaKnown RBP13.04□□□□□ -0.32
LDHA-211ENST00000494573 PCP11498 1178 aaKnown RBP13.04□□□□□ -0.32
LDHA-211ENST00000494573 IFNAR1P17181 557 aa13.04□□□□□ -0.32
LDHA-211ENST00000494573 CDC27P30260 824 aa13.04□□□□□ -0.32
LDHA-211ENST00000494573 IARSP41252 1262 aaKnown RBP13.04□□□□□ -0.32
LDHA-211ENST00000494573 WTAPQ15007 396 aa13.04□□□□□ -0.32
LDHA-211ENST00000494573 ANO6Q4KMQ2 910 aa13.04□□□□□ -0.32
LDHA-211ENST00000494573 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.04□□□□□ -0.32
LDHA-211ENST00000494573 RAB11FIP4Q86YS3 637 aa13.04□□□□□ -0.32
LDHA-211ENST00000494573 CKAP2LQ8IYA6 745 aa13.04□□□□□ -0.32
LDHA-211ENST00000494573 FSIP1Q8NA03 581 aa13.04□□□□□ -0.32
LDHA-211ENST00000494573 MRPS27Q92552 414 aaKnown RBP13.04□□□□□ -0.32
LDHA-211ENST00000494573 RIOK1Q9BRS2 568 aaKnown RBP13.04□□□□□ -0.32
LDHA-211ENST00000494573 FTOQ9C0B1 505 aaKnown RBP eCLIP13.04□□□□□ -0.32
LDHA-211ENST00000494573 FAM217BQ9NTX9 383 aaPredicted RBP13.04□□□□□ -0.32
LDHA-211ENST00000494573 SRP68Q9UHB9 627 aaKnown RBP13.04□□□□□ -0.32
LDHA-211ENST00000494573 PCDHA7Q9UN72 937 aa13.04□□□□□ -0.32
LDHA-211ENST00000494573 SLC12A7Q9Y666 1083 aa13.04□□□□□ -0.32
LDHA-211ENST00000494573 LRRC37AA6NMS7 1700 aa13.03□□□□□ -0.32
LDHA-211ENST00000494573 KIF28PB7ZC32 967 aa13.03□□□□□ -0.32
LDHA-211ENST00000494573 SPTLC2O15270 562 aa13.03□□□□□ -0.32
LDHA-211ENST00000494573 OFD1O75665 1012 aa13.03□□□□□ -0.32
LDHA-211ENST00000494573 FMNL1O95466 1100 aaPredicted RBP13.03□□□□□ -0.32
LDHA-211ENST00000494573 ME1P48163 572 aa13.03□□□□□ -0.32
LDHA-211ENST00000494573 SSRP1Q08945 709 aaKnown RBP13.03□□□□□ -0.32
LDHA-211ENST00000494573 SNW1Q13573 536 aaKnown RBP13.03□□□□□ -0.32
LDHA-211ENST00000494573 TRIM29Q14134 588 aa13.03□□□□□ -0.32
LDHA-211ENST00000494573 PPP2R5BQ15173 497 aa13.03□□□□□ -0.32
LDHA-211ENST00000494573 STX1AQ16623 288 aa13.03□□□□□ -0.32
LDHA-211ENST00000494573 ANO1Q5XXA6 986 aa13.03□□□□□ -0.32
LDHA-211ENST00000494573 KRT40Q6A162 431 aa13.03□□□□□ -0.32
LDHA-211ENST00000494573 OTUD7BQ6GQQ9 843 aa13.03□□□□□ -0.32
LDHA-211ENST00000494573 PTF1AQ7RTS3 328 aa13.03□□□□□ -0.32
LDHA-211ENST00000494573 MICU3Q86XE3 530 aa13.03□□□□□ -0.32
LDHA-211ENST00000494573 VPS37DQ86XT2 251 aa13.03□□□□□ -0.32
LDHA-211ENST00000494573 MIGA1Q8NAN2 632 aa13.03□□□□□ -0.32
LDHA-211ENST00000494573 CBX8Q9HC52 389 aa13.03□□□□□ -0.32
LDHA-211ENST00000494573 SENP2Q9HC62 589 aa13.03□□□□□ -0.32
LDHA-211ENST00000494573 ABCF2Q9UG63 623 aa13.03□□□□□ -0.32
LDHA-211ENST00000494573 BRWD3Q6RI45 1802 aa13.03□□□□□ -0.32
LDHA-211ENST00000494573 CCDC196A0A1B0GTZ2 297 aa13.02□□□□□ -0.33
LDHA-211ENST00000494573 GOLGA6L6A8MZA4 724 aa13.02□□□□□ -0.33
LDHA-211ENST00000494573 RANBP6O60518 1105 aaKnown RBP13.02□□□□□ -0.33
LDHA-211ENST00000494573 KCNQ4P56696 695 aa13.02□□□□□ -0.33
LDHA-211ENST00000494573 SF3A1Q15459 793 aaKnown RBP13.02□□□□□ -0.33
LDHA-211ENST00000494573 RTN1Q16799 776 aa13.02□□□□□ -0.33
LDHA-211ENST00000494573 ADGRA1Q86SQ6 560 aa13.02□□□□□ -0.33
LDHA-211ENST00000494573 FMR1NBQ8N0W7 255 aaPredicted RBP13.02□□□□□ -0.33
LDHA-211ENST00000494573 ESR2Q92731 530 aa13.02□□□□□ -0.33
LDHA-211ENST00000494573 ARHGEF1Q92888 912 aaKnown RBP13.02□□□□□ -0.33
LDHA-211ENST00000494573 IQSEC3Q9UPP2 1182 aaPredicted RBP13.02□□□□□ -0.33
LDHA-211ENST00000494573 CLIC4Q9Y696 253 aa13.02□□□□□ -0.33
LDHA-211ENST00000494573 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.02□□□□□ -0.331e-15■■□□□ 11.7
LDHA-211ENST00000494573 IRS2Q9Y4H2 1338 aa13.02□□□□□ -0.33
LDHA-211ENST00000494573 AP5Z1O43299 807 aa13.01□□□□□ -0.33
LDHA-211ENST00000494573 PPFIA3O75145 1194 aa13.01□□□□□ -0.33
LDHA-211ENST00000494573 PPP6R2O75170 966 aa13.01□□□□□ -0.33
LDHA-211ENST00000494573 FGRP09769 529 aa13.01□□□□□ -0.33
LDHA-211ENST00000494573 U2AF2P26368 475 aaKnown RBP eCLIP13.01□□□□□ -0.332e-8■■□□□ 13.2
LDHA-211ENST00000494573 TM4SF1P30408 202 aa13.01□□□□□ -0.33
LDHA-211ENST00000494573 HIBADHP31937 336 aaKnown RBP13.01□□□□□ -0.33
LDHA-211ENST00000494573 NT5C2P49902 561 aa13.01□□□□□ -0.33
LDHA-211ENST00000494573 SLC39A14Q15043 492 aa13.01□□□□□ -0.33
LDHA-211ENST00000494573 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.01□□□□□ -0.33
LDHA-211ENST00000494573 GJD4Q96KN9 370 aaPredicted RBP13.01□□□□□ -0.33
LDHA-211ENST00000494573 INCENPQ9NQS7 918 aa13.01□□□□□ -0.33
LDHA-211ENST00000494573 FOCADQ5VW36 1801 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms