RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 IGF1RP08069 1367 aa4.58□□□□□ -1.68
ATG3-207ENST00000494571 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.58□□□□□ -1.68
ATG3-207ENST00000494571 A0A1B0GVL5 298 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 POTEB3A0JP26 581 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 PSDA5PKW4 1024 aaPredicted RBP4.57□□□□□ -1.68
ATG3-207ENST00000494571 KIF3BO15066 747 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 PARP1P09874 1014 aaKnown RBP4.57□□□□□ -1.68
ATG3-207ENST00000494571 NAT2P11245 290 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 CDC25BP30305 580 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 ALDH1B1P30837 517 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 GGCXP38435 758 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 SMTNP53814 917 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 MXRA7P84157 204 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 ROR2Q01974 943 aaKnown RBP4.57□□□□□ -1.68
ATG3-207ENST00000494571 FOXD4Q12950 439 aaPredicted RBP4.57□□□□□ -1.68
ATG3-207ENST00000494571 PKD2Q13563 968 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 TTC22Q5TAA0 569 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 TCERG1LQ5VWI1 586 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 TRIM65Q6PJ69 517 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 POTEBQ6S5H4 581 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 Q6ZUG5 572 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 B4GALNT4Q76KP1 1039 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 DZIP1Q86YF9 867 aaKnown RBP4.57□□□□□ -1.68
ATG3-207ENST00000494571 PLEKHM2Q8IWE5 1019 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 GSPT2Q8IYD1 628 aaKnown RBP4.57□□□□□ -1.68
ATG3-207ENST00000494571 USHBP1Q8N6Y0 703 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 PDILTQ8N807 584 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 RASSF8Q8NHQ8 419 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 WHAMMQ8TF30 809 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 ATRIPQ8WXE1 791 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 BRD8Q9H0E9 1235 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 ANKZF1Q9H8Y5 726 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 CDHR2Q9BYE9 1310 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 RNF17Q9BXT8 1623 aaKnown RBP4.57□□□□□ -1.68
ATG3-207ENST00000494571 ATP10AO60312 1499 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 RPAP1Q9BWH6 1393 aaPredicted RBP4.57□□□□□ -1.68
ATG3-207ENST00000494571 DISP3Q9P2K9 1392 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 IPO5O00410 1097 aaKnown RBP4.57□□□□□ -1.68
ATG3-207ENST00000494571 CREB3O43889 395 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 SMNDC1O75940 238 aaKnown RBP eCLIP4.57□□□□□ -1.68
ATG3-207ENST00000494571 MBD4O95243 580 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 FESP07332 822 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 SLC8A1P32418 973 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 HSPA4P34932 840 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 CUL4AQ13619 759 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 SPECC1Q5M775 1068 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 PPP1R15BQ5SWA1 713 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 SEPT14Q6ZU15 432 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 PNMA8AQ86V59 439 aaPredicted RBP4.57□□□□□ -1.68
ATG3-207ENST00000494571 TTC30AQ86WT1 665 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 CCDC50Q8IVM0 306 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 CCDC83Q8IWF9 413 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 RNF168Q8IYW5 571 aaPredicted RBP4.57□□□□□ -1.68
ATG3-207ENST00000494571 NECTIN2Q92692 538 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 CUL5Q93034 780 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.57□□□□□ -1.68
ATG3-207ENST00000494571 DESI2Q9BSY9 194 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 UBE2OQ9C0C9 1292 aaKnown RBP4.57□□□□□ -1.68
ATG3-207ENST00000494571 XPO4Q9C0E2 1151 aaKnown RBP4.57□□□□□ -1.68
ATG3-207ENST00000494571 VCPKMTQ9H867 229 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 LZTFL1Q9NQ48 299 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 BATF3Q9NR55 127 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 ANO10Q9NW15 660 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 HYPKQ9NX55 129 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 ITM2BQ9Y287 266 aa4.57□□□□□ -1.68
ATG3-207ENST00000494571 MLH3Q9UHC1 1453 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 LRRC10BA6NIK2 292 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 LSM1O15116 133 aaKnown RBP4.56□□□□□ -1.68
ATG3-207ENST00000494571 EIF3HO15372 352 aaKnown RBP eCLIP4.56□□□□□ -1.68
ATG3-207ENST00000494571 NDUFB5O43674 189 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 DIAPH2O60879 1101 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 PFDN1O60925 122 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 RASSF9O75901 435 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 SYF2O95926 243 aaKnown RBP4.56□□□□□ -1.68
ATG3-207ENST00000494571 CLTAP09496 248 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 LINGO3P0C6S8 592 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 CLCN2P51788 898 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 KRT85P78386 507 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 STIM1Q13586 685 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 MYBPC3Q14896 1274 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 CCDC121Q6ZUS5 278 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 PTF1AQ7RTS3 328 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 NANOGNBQ7Z5D8 188 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 PALB2Q86YC2 1186 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 TMCO5AQ8N6Q1 288 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 MAB21L3Q8N8X9 362 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 CCDC150Q8NCX0 1101 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 SMARCC2Q8TAQ2 1214 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 DDX54Q8TDD1 881 aaKnown RBP4.56□□□□□ -1.68
ATG3-207ENST00000494571 TAF4BQ92750 862 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 GCC1Q96CN9 775 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 INTS4Q96HW7 963 aaKnown RBP4.56□□□□□ -1.68
ATG3-207ENST00000494571 SPATA32Q96LK8 384 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 SLX1AQ9BQ83 275 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 TRIM7Q9C029 511 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 GGNBP2Q9H3C7 697 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 HELLSQ9NRZ9 838 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 PRXQ9BXM0 1461 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 UHRF1BP1Q6BDS2 1440 aa4.56□□□□□ -1.68
ATG3-207ENST00000494571 ERICH2A1L162 156 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms