RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 TIMMDC1Q9NPL8 285 aa10.58□□□□□ -0.72
RIF1-211ENST00000494333 ADAMTS8Q9UP79 889 aa10.58□□□□□ -0.72
RIF1-211ENST00000494333 VIRMAQ69YN4 1812 aaKnown RBP10.58□□□□□ -0.72
RIF1-211ENST00000494333 SLC35F4A4IF30 521 aa10.57□□□□□ -0.72
RIF1-211ENST00000494333 WEE1P30291 646 aa10.57□□□□□ -0.72
RIF1-211ENST00000494333 PSMA6P60900 246 aaKnown RBP10.57□□□□□ -0.72
RIF1-211ENST00000494333 LMOD3Q0VAK6 560 aa10.57□□□□□ -0.72
RIF1-211ENST00000494333 PRR5LQ6MZQ0 368 aa10.57□□□□□ -0.72
RIF1-211ENST00000494333 CLEC4GQ6UXB4 293 aa10.57□□□□□ -0.72
RIF1-211ENST00000494333 C2CD5Q86YS7 1000 aa10.57□□□□□ -0.72
RIF1-211ENST00000494333 RUNDC1Q96C34 613 aa10.57□□□□□ -0.72
RIF1-211ENST00000494333 BRIP1Q9BX63 1249 aa10.57□□□□□ -0.72
RIF1-211ENST00000494333 TSPYL4Q9UJ04 414 aa10.57□□□□□ -0.72
RIF1-211ENST00000494333 ATP10DQ9P241 1426 aa10.57□□□□□ -0.72
RIF1-211ENST00000494333 SIPA1L3O60292 1781 aaPredicted RBP10.57□□□□□ -0.72
RIF1-211ENST00000494333 PPP1R12BO60237 982 aaPredicted RBP10.56□□□□□ -0.72
RIF1-211ENST00000494333 PRMT3O60678 531 aa10.56□□□□□ -0.72
RIF1-211ENST00000494333 IGFBP4P22692 258 aa10.56□□□□□ -0.72
RIF1-211ENST00000494333 NOS2P35228 1153 aa10.56□□□□□ -0.72
RIF1-211ENST00000494333 PDE6BP35913 854 aa10.56□□□□□ -0.72
RIF1-211ENST00000494333 CCDC155Q8N6L0 562 aa10.56□□□□□ -0.72
RIF1-211ENST00000494333 TTLL6Q8N841 843 aa10.56□□□□□ -0.72
RIF1-211ENST00000494333 CNBD1Q8NA66 436 aa10.56□□□□□ -0.72
RIF1-211ENST00000494333 CLP1Q92989 425 aaKnown RBP10.56□□□□□ -0.72
RIF1-211ENST00000494333 ZNF652Q9Y2D9 606 aa10.56□□□□□ -0.72
RIF1-211ENST00000494333 DYRK1BQ9Y463 629 aa10.56□□□□□ -0.72
RIF1-211ENST00000494333 CARMIL3Q8ND23 1372 aa10.55□□□□□ -0.72
RIF1-211ENST00000494333 N4BP2Q86UW6 1770 aaPredicted RBP10.55□□□□□ -0.72
RIF1-211ENST00000494333 SERTM1A2A2V5 107 aa10.55□□□□□ -0.72
RIF1-211ENST00000494333 MYL6BP14649 208 aa10.55□□□□□ -0.72
RIF1-211ENST00000494333 EIF2S2P20042 333 aaKnown RBP10.55□□□□□ -0.72
RIF1-211ENST00000494333 HLFQ16534 295 aa10.55□□□□□ -0.72
RIF1-211ENST00000494333 OCLNQ16625 522 aa10.55□□□□□ -0.72
RIF1-211ENST00000494333 SH3PXD2AQ5TCZ1 1133 aa10.55□□□□□ -0.72
RIF1-211ENST00000494333 C9orf131Q5VYM1 1079 aa10.55□□□□□ -0.72
RIF1-211ENST00000494333 NBPF5PQ86XG9 351 aaPredicted RBP10.55□□□□□ -0.72
RIF1-211ENST00000494333 ZNF622Q969S3 477 aaKnown RBP eCLIP10.55□□□□□ -0.72
RIF1-211ENST00000494333 AIDAQ96BJ3 306 aa10.55□□□□□ -0.72
RIF1-211ENST00000494333 USTQ9Y2C2 406 aa10.55□□□□□ -0.72
RIF1-211ENST00000494333 KIF13BQ9NQT8 1826 aa10.55□□□□□ -0.72
RIF1-211ENST00000494333 ADCY9O60503 1353 aa10.54□□□□□ -0.72
RIF1-211ENST00000494333 FAM177BA6PVY3 158 aa10.54□□□□□ -0.72
RIF1-211ENST00000494333 EML1O00423 815 aa10.54□□□□□ -0.72
RIF1-211ENST00000494333 ST5P78524 1137 aa10.54□□□□□ -0.72
RIF1-211ENST00000494333 TPTE2Q6XPS3 522 aa10.54□□□□□ -0.72
RIF1-211ENST00000494333 BABAM1Q9NWV8 329 aa10.54□□□□□ -0.72
RIF1-211ENST00000494333 ZNF232Q9UNY5 417 aa10.54□□□□□ -0.72
RIF1-211ENST00000494333 NIP7Q9Y221 180 aaKnown RBP eCLIP10.54□□□□□ -0.72
RIF1-211ENST00000494333 CHMP3Q9Y3E7 222 aa10.54□□□□□ -0.72
RIF1-211ENST00000494333 LAS1LQ9Y4W2 734 aaKnown RBP10.54□□□□□ -0.72
RIF1-211ENST00000494333 KIAA1551Q9HCM1 1747 aa10.53□□□□□ -0.72
RIF1-211ENST00000494333 A0A1B0GTH6 734 aa10.53□□□□□ -0.72
RIF1-211ENST00000494333 TTLL7Q6ZT98 887 aa10.53□□□□□ -0.72
RIF1-211ENST00000494333 STAG2Q8N3U4 1231 aa10.53□□□□□ -0.72
RIF1-211ENST00000494333 GAS2L1Q99501 681 aaPredicted RBP10.53□□□□□ -0.72
RIF1-211ENST00000494333 C2orf49Q9BVC5 232 aaPredicted RBP10.53□□□□□ -0.72
RIF1-211ENST00000494333 RNF181Q9P0P0 153 aa10.53□□□□□ -0.72
RIF1-211ENST00000494333 NXF1Q9UBU9 619 aaKnown RBP10.53□□□□□ -0.72
RIF1-211ENST00000494333 ERVV-1B6SEH8 477 aa10.52□□□□□ -0.73
RIF1-211ENST00000494333 CHL1O00533 1208 aa10.52□□□□□ -0.73
RIF1-211ENST00000494333 PPFIA3O75145 1194 aa10.52□□□□□ -0.73
RIF1-211ENST00000494333 TXLNAP40222 546 aa10.52□□□□□ -0.73
RIF1-211ENST00000494333 KIF6Q6ZMV9 814 aa10.52□□□□□ -0.73
RIF1-211ENST00000494333 CXXC1Q9P0U4 656 aaPredicted RBP10.52□□□□□ -0.73
RIF1-211ENST00000494333 APAF1O14727 1248 aa10.51□□□□□ -0.73
RIF1-211ENST00000494333 F11P03951 625 aa10.51□□□□□ -0.73
RIF1-211ENST00000494333 SRGNP10124 158 aa10.51□□□□□ -0.73
RIF1-211ENST00000494333 ATP2B4P23634 1241 aa10.51□□□□□ -0.73
RIF1-211ENST00000494333 MSX1P28360 303 aa10.51□□□□□ -0.73
RIF1-211ENST00000494333 HIRAP54198 1017 aaPredicted RBP10.51□□□□□ -0.73
RIF1-211ENST00000494333 RASSF7Q02833 373 aa10.51□□□□□ -0.73
RIF1-211ENST00000494333 FKBP5Q13451 457 aaPredicted RBP10.51□□□□□ -0.73
RIF1-211ENST00000494333 MASTLQ96GX5 879 aa10.51□□□□□ -0.73
RIF1-211ENST00000494333 GPAMQ9HCL2 828 aa10.51□□□□□ -0.73
RIF1-211ENST00000494333 HCN4Q9Y3Q4 1203 aa10.51□□□□□ -0.73
RIF1-211ENST00000494333 MAP3K15Q6ZN16 1313 aa10.51□□□□□ -0.73
RIF1-211ENST00000494333 ANXA1P04083 346 aa10.5□□□□□ -0.73
RIF1-211ENST00000494333 LMNB1P20700 586 aa10.5□□□□□ -0.73
RIF1-211ENST00000494333 VEGFBP49765 207 aa10.5□□□□□ -0.73
RIF1-211ENST00000494333 KRT24Q2M2I5 525 aa10.5□□□□□ -0.73
RIF1-211ENST00000494333 CCDC184Q52MB2 194 aa10.5□□□□□ -0.73
RIF1-211ENST00000494333 STYK1Q6J9G0 422 aa10.5□□□□□ -0.73
RIF1-211ENST00000494333 ERBB4Q15303 1308 aa10.5□□□□□ -0.73
RIF1-211ENST00000494333 NRXN2Q9P2S2 1712 aa10.5□□□□□ -0.73
RIF1-211ENST00000494333 AFDNP55196 1824 aaKnown RBP10.49□□□□□ -0.73
RIF1-211ENST00000494333 DLG5Q8TDM6 1919 aa10.49□□□□□ -0.73
RIF1-211ENST00000494333 ATP4AP20648 1035 aa10.49□□□□□ -0.73
RIF1-211ENST00000494333 ITGA6P23229 1130 aa10.49□□□□□ -0.73
RIF1-211ENST00000494333 GPTP24298 496 aa10.49□□□□□ -0.73
RIF1-211ENST00000494333 PRELPP51888 382 aa10.49□□□□□ -0.73
RIF1-211ENST00000494333 AIMP1Q12904 312 aaKnown RBP10.49□□□□□ -0.73
RIF1-211ENST00000494333 PROSER3Q2NL68 480 aa10.49□□□□□ -0.73
RIF1-211ENST00000494333 RIPOR1Q6ZS17 1223 aa10.49□□□□□ -0.73
RIF1-211ENST00000494333 LRP10Q7Z4F1 713 aa10.49□□□□□ -0.73
RIF1-211ENST00000494333 NMRK2Q9NPI5 230 aa10.49□□□□□ -0.73
RIF1-211ENST00000494333 CUEDC1Q9NWM3 386 aaPredicted RBP10.49□□□□□ -0.73
RIF1-211ENST00000494333 ZDHHC3Q9NYG2 299 aa10.49□□□□□ -0.73
RIF1-211ENST00000494333 KLRG2A4D1S0 409 aaPredicted RBP10.48□□□□□ -0.73
RIF1-211ENST00000494333 NFKBIEO00221 500 aa10.48□□□□□ -0.73
RIF1-211ENST00000494333 NPR1P16066 1061 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms