RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 PF4P02776 101 aa9.65□□□□□ -0.86
MSL3-217ENST00000494268 H2AFB1P0C5Y9 115 aa9.65□□□□□ -0.86
MSL3-217ENST00000494268 H2AFB2P0C5Z0 115 aa9.65□□□□□ -0.86
MSL3-217ENST00000494268 LMNB1P20700 586 aa9.65□□□□□ -0.86
MSL3-217ENST00000494268 MAP4P27816 1152 aaKnown RBP9.65□□□□□ -0.86
MSL3-217ENST00000494268 RXRBP28702 533 aa9.65□□□□□ -0.86
MSL3-217ENST00000494268 FANCCQ00597 558 aa9.65□□□□□ -0.86
MSL3-217ENST00000494268 CAMK2GQ13555 558 aaPredicted RBP9.65□□□□□ -0.86
MSL3-217ENST00000494268 SCARA3Q6AZY7 606 aa9.65□□□□□ -0.86
MSL3-217ENST00000494268 BEND4Q6ZU67 534 aa9.65□□□□□ -0.86
MSL3-217ENST00000494268 SEMA6BQ9H3T3 888 aa9.65□□□□□ -0.86
MSL3-217ENST00000494268 STOML1Q9UBI4 398 aa9.65□□□□□ -0.86
MSL3-217ENST00000494268 RAXQ9Y2V3 346 aa9.65□□□□□ -0.86
MSL3-217ENST00000494268 RAB6AP20340 208 aa9.64□□□□□ -0.87
MSL3-217ENST00000494268 ZNF76P36508 570 aa9.64□□□□□ -0.87
MSL3-217ENST00000494268 HS2ST1Q7LGA3 356 aa9.64□□□□□ -0.87
MSL3-217ENST00000494268 TRIM42Q8IWZ5 723 aa9.64□□□□□ -0.87
MSL3-217ENST00000494268 MIR1-1HGQ9H1L0 117 aa9.64□□□□□ -0.87
MSL3-217ENST00000494268 NFICP08651 508 aa9.63□□□□□ -0.87
MSL3-217ENST00000494268 FAM160A1Q05DH4 1040 aa9.63□□□□□ -0.87
MSL3-217ENST00000494268 TTLL4Q14679 1199 aa9.63□□□□□ -0.87
MSL3-217ENST00000494268 PPM1JQ5JR12 505 aa9.63□□□□□ -0.87
MSL3-217ENST00000494268 LRFN4Q6PJG9 635 aa9.63□□□□□ -0.87
MSL3-217ENST00000494268 BNC2Q6ZN30 1099 aaPredicted RBP9.63□□□□□ -0.87
MSL3-217ENST00000494268 CLEC10AQ8IUN9 316 aa9.63□□□□□ -0.87
MSL3-217ENST00000494268 RHOVQ96L33 236 aa9.63□□□□□ -0.87
MSL3-217ENST00000494268 C7orf69Q9H7B7 122 aa9.63□□□□□ -0.87
MSL3-217ENST00000494268 LGR6Q9HBX8 967 aa9.63□□□□□ -0.87
MSL3-217ENST00000494268 HIF3AQ9Y2N7 669 aa9.63□□□□□ -0.87
MSL3-217ENST00000494268 SCAMP3O14828 347 aaKnown RBP9.62□□□□□ -0.87
MSL3-217ENST00000494268 HCLS1P14317 486 aaPredicted RBP9.62□□□□□ -0.87
MSL3-217ENST00000494268 HNRNPUQ00839 825 aaKnown RBP eCLIP9.62□□□□□ -0.87
MSL3-217ENST00000494268 LMNB2Q03252 620 aa9.62□□□□□ -0.87
MSL3-217ENST00000494268 NFKBIBQ15653 356 aa9.62□□□□□ -0.87
MSL3-217ENST00000494268 C9orf131Q5VYM1 1079 aa9.62□□□□□ -0.87
MSL3-217ENST00000494268 PLPPR2Q96GM1 343 aa9.62□□□□□ -0.87
MSL3-217ENST00000494268 FAM83CQ9BQN1 747 aa9.62□□□□□ -0.87
MSL3-217ENST00000494268 ATXN3LQ9H3M9 355 aa9.62□□□□□ -0.87
MSL3-217ENST00000494268 SEMA6CQ9H3T2 930 aa9.62□□□□□ -0.87
MSL3-217ENST00000494268 ACSS3Q9H6R3 686 aa9.62□□□□□ -0.87
MSL3-217ENST00000494268 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.61□□□□□ -0.87
MSL3-217ENST00000494268 NEFMP07197 916 aa9.61□□□□□ -0.87
MSL3-217ENST00000494268 ERVK-24P63145 666 aa9.61□□□□□ -0.87
MSL3-217ENST00000494268 RING1Q06587 406 aa9.61□□□□□ -0.87
MSL3-217ENST00000494268 PWP1Q13610 501 aa9.61□□□□□ -0.87
MSL3-217ENST00000494268 EZH1Q92800 747 aaPredicted RBP9.61□□□□□ -0.87
MSL3-217ENST00000494268 ELMO3Q96BJ8 720 aa9.61□□□□□ -0.87
MSL3-217ENST00000494268 FAM95CA0A1B0GW59 222 aa9.6□□□□□ -0.87
MSL3-217ENST00000494268 DYNC1LI2O43237 492 aaPredicted RBP9.6□□□□□ -0.87
MSL3-217ENST00000494268 RNGTTO60942 597 aaKnown RBP9.6□□□□□ -0.87
MSL3-217ENST00000494268 F13A1P00488 732 aa9.6□□□□□ -0.87
MSL3-217ENST00000494268 ITGB7P26010 798 aa9.6□□□□□ -0.87
MSL3-217ENST00000494268 FBXL19Q6PCT2 694 aa9.6□□□□□ -0.87
MSL3-217ENST00000494268 RNF34Q969K3 372 aa9.6□□□□□ -0.87
MSL3-217ENST00000494268 PIDD1Q9HB75 910 aa9.6□□□□□ -0.87
MSL3-217ENST00000494268 METTL5Q9NRN9 209 aaKnown RBP9.6□□□□□ -0.87
MSL3-217ENST00000494268 DAGLAQ9Y4D2 1042 aa9.6□□□□□ -0.87
MSL3-217ENST00000494268 GFRA2O00451 464 aa9.59□□□□□ -0.87
MSL3-217ENST00000494268 GARTP22102 1010 aa9.59□□□□□ -0.87
MSL3-217ENST00000494268 HDLBPQ00341 1268 aaKnown RBP9.59□□□□□ -0.87
MSL3-217ENST00000494268 ZNF394Q53GI3 561 aa9.59□□□□□ -0.87
MSL3-217ENST00000494268 WIPI1Q5MNZ9 446 aaPredicted RBP9.59□□□□□ -0.87
MSL3-217ENST00000494268 CYFIP1Q7L576 1253 aa9.59□□□□□ -0.87
MSL3-217ENST00000494268 METTL16Q86W50 562 aaKnown RBP9.59□□□□□ -0.87
MSL3-217ENST00000494268 GOLM1Q8NBJ4 401 aa9.59□□□□□ -0.87
MSL3-217ENST00000494268 RNF214Q8ND24 703 aa9.59□□□□□ -0.87
MSL3-217ENST00000494268 ADAMTS1Q9UHI8 967 aa9.59□□□□□ -0.87
MSL3-217ENST00000494268 FAM221AA4D161 298 aa9.58□□□□□ -0.88
MSL3-217ENST00000494268 K7ELQ4 463 aaPredicted RBP9.58□□□□□ -0.88
MSL3-217ENST00000494268 NTF4P34130 210 aa9.58□□□□□ -0.88
MSL3-217ENST00000494268 EIF4A3P38919 411 aaKnown RBP9.58□□□□□ -0.88
MSL3-217ENST00000494268 PRSS36Q5K4E3 855 aa9.58□□□□□ -0.88
MSL3-217ENST00000494268 HDXQ7Z353 690 aa9.58□□□□□ -0.88
MSL3-217ENST00000494268 CCDC84Q86UT8 332 aaPredicted RBP9.58□□□□□ -0.88
MSL3-217ENST00000494268 SMYD4Q8IYR2 804 aaPredicted RBP9.58□□□□□ -0.88
MSL3-217ENST00000494268 SHISA5Q8N114 240 aa9.58□□□□□ -0.88
MSL3-217ENST00000494268 YIPF2Q9BWQ6 316 aa9.58□□□□□ -0.88
MSL3-217ENST00000494268 PICK1Q9NRD5 415 aa9.58□□□□□ -0.88
MSL3-217ENST00000494268 PCDHGB7Q9Y5F8 929 aa9.58□□□□□ -0.88
MSL3-217ENST00000494268 PRAMEF27A3QJZ7 478 aa9.57□□□□□ -0.88
MSL3-217ENST00000494268 FSTP19883 344 aa9.57□□□□□ -0.88
MSL3-217ENST00000494268 SNAP47Q5SQN1 464 aa9.57□□□□□ -0.88
MSL3-217ENST00000494268 ZBTB37Q5TC79 503 aa9.57□□□□□ -0.88
MSL3-217ENST00000494268 UBE3DQ7Z6J8 389 aa9.57□□□□□ -0.88
MSL3-217ENST00000494268 FBXO27Q8NI29 283 aa9.57□□□□□ -0.88
MSL3-217ENST00000494268 ZNF296Q8WUU4 475 aaPredicted RBP9.57□□□□□ -0.88
MSL3-217ENST00000494268 ISL2Q96A47 359 aa9.57□□□□□ -0.88
MSL3-217ENST00000494268 SNCAIPQ9Y6H5 919 aa9.57□□□□□ -0.88
MSL3-217ENST00000494268 ADAM23O75077 832 aa9.56□□□□□ -0.88
MSL3-217ENST00000494268 CILPO75339 1184 aa9.56□□□□□ -0.88
MSL3-217ENST00000494268 RACK1P63244 317 aaKnown RBP9.56□□□□□ -0.88
MSL3-217ENST00000494268 RPL6Q02878 288 aaKnown RBP9.56□□□□□ -0.88
MSL3-217ENST00000494268 RNF43Q68DV7 783 aa9.56□□□□□ -0.88
MSL3-217ENST00000494268 PAOXQ6QHF9 649 aa9.56□□□□□ -0.88
MSL3-217ENST00000494268 SEZ6L2Q6UXD5 910 aa9.56□□□□□ -0.88
MSL3-217ENST00000494268 USP48Q86UV5 1035 aa9.56□□□□□ -0.88
MSL3-217ENST00000494268 GATAD2BQ8WXI9 593 aa9.56□□□□□ -0.88
MSL3-217ENST00000494268 SSU72Q9NP77 194 aaKnown RBP9.56□□□□□ -0.88
MSL3-217ENST00000494268 C1GALT1Q9NS00 363 aa9.56□□□□□ -0.88
MSL3-217ENST00000494268 GREM1O60565 184 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms