RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 KCNA1Q09470 495 aa7.89□□□□□ -1.15
FNDC3B-212ENST00000494000 RASEFQ8IZ41 740 aa7.89□□□□□ -1.15
FNDC3B-212ENST00000494000 FAM43AQ8N2R8 423 aa7.89□□□□□ -1.15
FNDC3B-212ENST00000494000 TMEM51Q9NW97 253 aa7.89□□□□□ -1.15
FNDC3B-212ENST00000494000 COL4A1P02462 1669 aa7.89□□□□□ -1.15
FNDC3B-212ENST00000494000 PCP11498 1178 aaKnown RBP7.88□□□□□ -1.15
FNDC3B-212ENST00000494000 IL1R1P14778 569 aa7.88□□□□□ -1.15
FNDC3B-212ENST00000494000 RPS6KB1P23443 525 aa7.88□□□□□ -1.15
FNDC3B-212ENST00000494000 LARGE2Q8N3Y3 721 aa7.88□□□□□ -1.15
FNDC3B-212ENST00000494000 SDR16C5Q8N3Y7 309 aa7.88□□□□□ -1.15
FNDC3B-212ENST00000494000 MAGEB6Q8N7X4 407 aa7.88□□□□□ -1.15
FNDC3B-212ENST00000494000 SUPT20HQ8NEM7 779 aa7.88□□□□□ -1.15
FNDC3B-212ENST00000494000 SEC62Q99442 399 aaKnown RBP7.88□□□□□ -1.15
FNDC3B-212ENST00000494000 LTBP1Q14766 1721 aa7.88□□□□□ -1.15
FNDC3B-212ENST00000494000 TTC36A6NLP5 189 aa7.88□□□□□ -1.15
FNDC3B-212ENST00000494000 ZNF213O14771 459 aa7.88□□□□□ -1.15
FNDC3B-212ENST00000494000 TRIM66O15016 1216 aa7.88□□□□□ -1.15
FNDC3B-212ENST00000494000 UFL1O94874 794 aa7.88□□□□□ -1.15
FNDC3B-212ENST00000494000 DDIT3P35638 169 aa7.88□□□□□ -1.15
FNDC3B-212ENST00000494000 IRX3P78415 501 aaPredicted RBP7.88□□□□□ -1.15
FNDC3B-212ENST00000494000 GPSM2P81274 684 aa7.88□□□□□ -1.15
FNDC3B-212ENST00000494000 C9orf131Q5VYM1 1079 aa7.88□□□□□ -1.15
FNDC3B-212ENST00000494000 NAA16Q6N069 864 aaPredicted RBP7.88□□□□□ -1.15
FNDC3B-212ENST00000494000 CCDC129Q6ZRS4 1044 aa7.88□□□□□ -1.15
FNDC3B-212ENST00000494000 NBPF11Q86T75 865 aa7.88□□□□□ -1.15
FNDC3B-212ENST00000494000 CCDC24Q8N4L8 307 aa7.88□□□□□ -1.15
FNDC3B-212ENST00000494000 MORC4Q8TE76 937 aa7.88□□□□□ -1.15
FNDC3B-212ENST00000494000 TMX3Q96JJ7 454 aa7.88□□□□□ -1.15
FNDC3B-212ENST00000494000 STRBPQ96SI9 672 aaKnown RBP7.88□□□□□ -1.15
FNDC3B-212ENST00000494000 COA1Q9GZY4 146 aa7.88□□□□□ -1.15
FNDC3B-212ENST00000494000 MAF1Q9H063 256 aa7.88□□□□□ -1.15
FNDC3B-212ENST00000494000 PUS7LQ9H0K6 701 aaKnown RBP7.88□□□□□ -1.15
FNDC3B-212ENST00000494000 RAI14Q9P0K7 980 aa7.88□□□□□ -1.15
FNDC3B-212ENST00000494000 NSFL1CQ9UNZ2 370 aaKnown RBP7.88□□□□□ -1.15
FNDC3B-212ENST00000494000 LAMA4Q16363 1823 aa7.88□□□□□ -1.15
FNDC3B-212ENST00000494000 CYP21A2P08686 494 aa7.87□□□□□ -1.15
FNDC3B-212ENST00000494000 ZNF16P17020 682 aaPredicted RBP7.87□□□□□ -1.15
FNDC3B-212ENST00000494000 RFX1P22670 979 aa7.87□□□□□ -1.15
FNDC3B-212ENST00000494000 CYP7A1P22680 504 aa7.87□□□□□ -1.15
FNDC3B-212ENST00000494000 C1QBPQ07021 282 aaKnown RBP7.87□□□□□ -1.15
FNDC3B-212ENST00000494000 TRDNQ13061 729 aa7.87□□□□□ -1.15
FNDC3B-212ENST00000494000 PI16Q6UXB8 463 aa7.87□□□□□ -1.15
FNDC3B-212ENST00000494000 DHX32Q7L7V1 743 aaKnown RBP7.87□□□□□ -1.15
FNDC3B-212ENST00000494000 C2CD5Q86YS7 1000 aa7.87□□□□□ -1.15
FNDC3B-212ENST00000494000 TBC1D16Q8TBP0 767 aa7.87□□□□□ -1.15
FNDC3B-212ENST00000494000 CNNM2Q9H8M5 875 aa7.87□□□□□ -1.15
FNDC3B-212ENST00000494000 WWC3Q9ULE0 1092 aa7.87□□□□□ -1.15
FNDC3B-212ENST00000494000 MAGEB6P1A0A0J9YX57 407 aa7.87□□□□□ -1.15
FNDC3B-212ENST00000494000 CD2BP2O95400 341 aaKnown RBP7.87□□□□□ -1.15
FNDC3B-212ENST00000494000 NOL10Q9BSC4 688 aaKnown RBP7.87□□□□□ -1.15
FNDC3B-212ENST00000494000 VPS33BQ9H267 617 aa7.87□□□□□ -1.15
FNDC3B-212ENST00000494000 RNF41Q9H4P4 317 aaPredicted RBP7.87□□□□□ -1.15
FNDC3B-212ENST00000494000 ABCF2Q9UG63 623 aa7.87□□□□□ -1.15
FNDC3B-212ENST00000494000 FAM205AQ6ZU69 1335 aa7.87□□□□□ -1.15
FNDC3B-212ENST00000494000 DLEC1Q9Y238 1755 aa7.86□□□□□ -1.15
FNDC3B-212ENST00000494000 SNAP23O00161 211 aa7.86□□□□□ -1.15
FNDC3B-212ENST00000494000 FGAP02671 866 aa7.86□□□□□ -1.15
FNDC3B-212ENST00000494000 LDHBP07195 334 aaKnown RBP7.86□□□□□ -1.15
FNDC3B-212ENST00000494000 PRR29P0C7W0 189 aa7.86□□□□□ -1.15
FNDC3B-212ENST00000494000 PLCG2P16885 1265 aa7.86□□□□□ -1.15
FNDC3B-212ENST00000494000 AK2P54819 239 aa7.86□□□□□ -1.15
FNDC3B-212ENST00000494000 GYS2P54840 703 aa7.86□□□□□ -1.15
FNDC3B-212ENST00000494000 MKRN4PQ13434 485 aaPredicted RBP7.86□□□□□ -1.15
FNDC3B-212ENST00000494000 SOGA3Q5TF21 947 aa7.86□□□□□ -1.15
FNDC3B-212ENST00000494000 NCOA7Q8NI08 942 aa7.86□□□□□ -1.15
FNDC3B-212ENST00000494000 PIK3R5Q8WYR1 880 aa7.86□□□□□ -1.15
FNDC3B-212ENST00000494000 UPF3BQ9BZI7 483 aaKnown RBP7.86□□□□□ -1.15
FNDC3B-212ENST00000494000 ZC3H12CQ9C0D7 883 aaKnown RBP7.86□□□□□ -1.15
FNDC3B-212ENST00000494000 NAPBQ9H115 298 aa7.86□□□□□ -1.15
FNDC3B-212ENST00000494000 SLKQ9H2G2 1235 aaPredicted RBP7.86□□□□□ -1.15
FNDC3B-212ENST00000494000 CD209Q9NNX6 404 aa7.86□□□□□ -1.15
FNDC3B-212ENST00000494000 SERPINA10Q9UK55 444 aa7.86□□□□□ -1.15
FNDC3B-212ENST00000494000 C10orf71Q711Q0 1435 aa7.86□□□□□ -1.15
FNDC3B-212ENST00000494000 RBM47A0AV96 593 aaKnown RBP7.86□□□□□ -1.15
FNDC3B-212ENST00000494000 E7EWF7 191 aa7.86□□□□□ -1.15
FNDC3B-212ENST00000494000 BAG3O95817 575 aa7.86□□□□□ -1.15
FNDC3B-212ENST00000494000 FKBP1AP62942 108 aaKnown RBP7.86□□□□□ -1.15
FNDC3B-212ENST00000494000 DPP8Q6V1X1 898 aaPredicted RBP7.86□□□□□ -1.15
FNDC3B-212ENST00000494000 RALYLQ86SE5 291 aaKnown RBP7.86□□□□□ -1.15
FNDC3B-212ENST00000494000 GBP4Q96PP9 640 aa7.86□□□□□ -1.15
FNDC3B-212ENST00000494000 KRT23Q9C075 422 aa7.86□□□□□ -1.15
FNDC3B-212ENST00000494000 ATP8A2Q9NTI2 1148 aa7.86□□□□□ -1.15
FNDC3B-212ENST00000494000 COL11A2P13942 1736 aaPredicted RBP7.86□□□□□ -1.15
FNDC3B-212ENST00000494000 MYO5AQ9Y4I1 1855 aaKnown RBP7.86□□□□□ -1.15
FNDC3B-212ENST00000494000 CACNA1SQ13698 1873 aa7.85□□□□□ -1.15
FNDC3B-212ENST00000494000 C6orf229H3BNL8 230 aa7.85□□□□□ -1.15
FNDC3B-212ENST00000494000 MBD4O95243 580 aa7.85□□□□□ -1.15
FNDC3B-212ENST00000494000 MCM5P33992 734 aa7.85□□□□□ -1.15
FNDC3B-212ENST00000494000 ADCK5Q3MIX3 580 aa7.85□□□□□ -1.15
FNDC3B-212ENST00000494000 DZIP1Q86YF9 867 aaKnown RBP7.85□□□□□ -1.15
FNDC3B-212ENST00000494000 NSUN4Q96CB9 384 aaKnown RBP7.85□□□□□ -1.15
FNDC3B-212ENST00000494000 RTFDC1Q9BY42 306 aaPredicted RBP7.85□□□□□ -1.15
FNDC3B-212ENST00000494000 AGXT2Q9BYV1 514 aa7.85□□□□□ -1.15
FNDC3B-212ENST00000494000 CRNKL1Q9BZJ0 848 aaKnown RBP7.85□□□□□ -1.15
FNDC3B-212ENST00000494000 KIF3AQ9Y496 699 aa7.85□□□□□ -1.15
FNDC3B-212ENST00000494000 TIAM2Q8IVF5 1701 aa7.85□□□□□ -1.15
FNDC3B-212ENST00000494000 COL1A1P02452 1464 aaPredicted RBP7.85□□□□□ -1.15
FNDC3B-212ENST00000494000 SLC3A2P08195 630 aaKnown RBP7.85□□□□□ -1.15
FNDC3B-212ENST00000494000 PPP4CP60510 307 aa7.85□□□□□ -1.15
FNDC3B-212ENST00000494000 EXOSC10Q01780 885 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms