RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 ERC1Q8IUD2 1116 aa14.11□□□□□ -0.15
LRTM1-202ENST00000493075 RPAP2Q8IXW5 612 aaPredicted RBP14.11□□□□□ -0.15
LRTM1-202ENST00000493075 ZCCHC17Q9NP64 241 aaKnown RBP14.11□□□□□ -0.15
LRTM1-202ENST00000493075 LRP2BPQ9P2M1 347 aa14.11□□□□□ -0.15
LRTM1-202ENST00000493075 RCAN3Q9UKA8 241 aa14.11□□□□□ -0.15
LRTM1-202ENST00000493075 AKAP11Q9UKA4 1901 aa14.1□□□□□ -0.15
LRTM1-202ENST00000493075 CASP8AP2Q9UKL3 1982 aa14.1□□□□□ -0.15
LRTM1-202ENST00000493075 IRF6O14896 467 aa14.1□□□□□ -0.15
LRTM1-202ENST00000493075 INPP5BP32019 993 aa14.1□□□□□ -0.15
LRTM1-202ENST00000493075 CRHR2Q13324 411 aa14.1□□□□□ -0.15
LRTM1-202ENST00000493075 SNAPC2Q13487 334 aa14.1□□□□□ -0.15
LRTM1-202ENST00000493075 RTN4Q9NQC3 1192 aaKnown RBP14.1□□□□□ -0.15
LRTM1-202ENST00000493075 ZBTB40Q9NUA8 1239 aa14.1□□□□□ -0.15
LRTM1-202ENST00000493075 RAI14Q9P0K7 980 aa14.1□□□□□ -0.15
LRTM1-202ENST00000493075 RFX7Q2KHR2 1363 aa14.09□□□□□ -0.15
LRTM1-202ENST00000493075 FBXO46Q6PJ61 603 aaPredicted RBP14.09□□□□□ -0.15
LRTM1-202ENST00000493075 SH3BP5LQ7L8J4 393 aa14.09□□□□□ -0.15
LRTM1-202ENST00000493075 EAF2Q96CJ1 260 aaPredicted RBP14.09□□□□□ -0.15
LRTM1-202ENST00000493075 ZFYVE28Q9HCC9 887 aa14.09□□□□□ -0.15
LRTM1-202ENST00000493075 DDX4Q9NQI0 724 aaKnown RBP14.09□□□□□ -0.15
LRTM1-202ENST00000493075 DBNLQ9UJU6 430 aaKnown RBP14.09□□□□□ -0.15
LRTM1-202ENST00000493075 ATRNL1Q5VV63 1379 aa14.08□□□□□ -0.16
LRTM1-202ENST00000493075 PHF20L1A8MW92 1017 aa14.08□□□□□ -0.16
LRTM1-202ENST00000493075 TBC1D12O60347 775 aa14.08□□□□□ -0.16
LRTM1-202ENST00000493075 CYP2E1P05181 493 aaPredicted RBP14.08□□□□□ -0.16
LRTM1-202ENST00000493075 PPP4CP60510 307 aa14.08□□□□□ -0.16
LRTM1-202ENST00000493075 SP3Q02447 781 aa14.08□□□□□ -0.16
LRTM1-202ENST00000493075 PDE3AQ14432 1141 aa14.08□□□□□ -0.16
LRTM1-202ENST00000493075 ZSCAN29Q8IWY8 852 aaPredicted RBP14.08□□□□□ -0.16
LRTM1-202ENST00000493075 ERO1AQ96HE7 468 aa14.08□□□□□ -0.16
LRTM1-202ENST00000493075 CCDC8Q9H0W5 538 aaPredicted RBP14.08□□□□□ -0.16
LRTM1-202ENST00000493075 SNRKQ9NRH2 765 aa14.08□□□□□ -0.16
LRTM1-202ENST00000493075 HPS5Q9UPZ3 1129 aa14.08□□□□□ -0.16
LRTM1-202ENST00000493075 KCNH4Q9UQ05 1017 aa14.08□□□□□ -0.16
LRTM1-202ENST00000493075 DDTLA6NHG4 134 aaPredicted RBP14.07□□□□□ -0.16
LRTM1-202ENST00000493075 CXCL11O14625 94 aa14.07□□□□□ -0.16
LRTM1-202ENST00000493075 HMMRO75330 724 aa14.07□□□□□ -0.16
LRTM1-202ENST00000493075 BAG3O95817 575 aa14.07□□□□□ -0.16
LRTM1-202ENST00000493075 TAF1CQ15572 869 aaPredicted RBP14.07□□□□□ -0.16
LRTM1-202ENST00000493075 NAA16Q6N069 864 aaPredicted RBP14.07□□□□□ -0.16
LRTM1-202ENST00000493075 TMED8Q6PL24 325 aaPredicted RBP14.07□□□□□ -0.16
LRTM1-202ENST00000493075 FAM43AQ8N2R8 423 aa14.07□□□□□ -0.16
LRTM1-202ENST00000493075 COG6Q9Y2V7 657 aa14.07□□□□□ -0.16
LRTM1-202ENST00000493075 BTBD19C9JJ37 291 aa14.06□□□□□ -0.16
LRTM1-202ENST00000493075 CTNND1O60716 968 aaKnown RBP14.06□□□□□ -0.16
LRTM1-202ENST00000493075 PLCG2P16885 1265 aa14.06□□□□□ -0.16
LRTM1-202ENST00000493075 ZAP70P43403 619 aa14.06□□□□□ -0.16
LRTM1-202ENST00000493075 PICALMQ13492 652 aa14.06□□□□□ -0.16
LRTM1-202ENST00000493075 ARHGEF6Q15052 776 aa14.06□□□□□ -0.16
LRTM1-202ENST00000493075 ANKRD23Q86SG2 305 aa14.06□□□□□ -0.16
LRTM1-202ENST00000493075 SCYL3Q8IZE3 742 aa14.06□□□□□ -0.16
LRTM1-202ENST00000493075 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.06□□□□□ -0.16
LRTM1-202ENST00000493075 NOL10Q9BSC4 688 aaKnown RBP14.06□□□□□ -0.16
LRTM1-202ENST00000493075 EXOC6BQ9Y2D4 811 aa14.06□□□□□ -0.16
LRTM1-202ENST00000493075 TLR2O60603 784 aa14.05□□□□□ -0.16
LRTM1-202ENST00000493075 RAB11FIP3O75154 756 aa14.05□□□□□ -0.16
LRTM1-202ENST00000493075 OTOP1Q7RTM1 612 aa14.05□□□□□ -0.16
LRTM1-202ENST00000493075 SIRT2Q8IXJ6 389 aa14.05□□□□□ -0.16
LRTM1-202ENST00000493075 RHPN1Q8TCX5 695 aa14.05□□□□□ -0.16
LRTM1-202ENST00000493075 KIF1BPQ96EK5 621 aa14.05□□□□□ -0.16
LRTM1-202ENST00000493075 OSBPL5Q9H0X9 879 aaPredicted RBP14.05□□□□□ -0.16
LRTM1-202ENST00000493075 TLR7Q9NYK1 1049 aaKnown RBP14.05□□□□□ -0.16
LRTM1-202ENST00000493075 TRIM17Q9Y577 477 aa14.05□□□□□ -0.16
LRTM1-202ENST00000493075 COL2A1P02458 1487 aaPredicted RBP14.04□□□□□ -0.16
LRTM1-202ENST00000493075 MLLT1Q03111 559 aaPredicted RBP14.04□□□□□ -0.16
LRTM1-202ENST00000493075 AACSQ86V21 672 aa14.04□□□□□ -0.16
LRTM1-202ENST00000493075 TEX11Q8IYF3 940 aa14.04□□□□□ -0.16
LRTM1-202ENST00000493075 CLASRPQ8N2M8 674 aaKnown RBP14.04□□□□□ -0.16
LRTM1-202ENST00000493075 DHX36Q9H2U1 1008 aaKnown RBP14.04□□□□□ -0.16
LRTM1-202ENST00000493075 EFCC1Q9HA90 598 aa14.04□□□□□ -0.16
LRTM1-202ENST00000493075 PIH1D3Q9NQM4 214 aaKnown RBP14.04□□□□□ -0.16
LRTM1-202ENST00000493075 PICK1Q9NRD5 415 aa14.04□□□□□ -0.16
LRTM1-202ENST00000493075 ZHX2Q9Y6X8 837 aa14.04□□□□□ -0.16
LRTM1-202ENST00000493075 MYH13Q9UKX3 1938 aa14.03□□□□□ -0.16
LRTM1-202ENST00000493075 LAMB1P07942 1786 aa14.03□□□□□ -0.16
LRTM1-202ENST00000493075 PTPRAP18433 802 aa14.03□□□□□ -0.16
LRTM1-202ENST00000493075 MOGSQ13724 837 aa14.03□□□□□ -0.16
LRTM1-202ENST00000493075 FASTKD5Q7L8L6 764 aaKnown RBP14.03□□□□□ -0.16
LRTM1-202ENST00000493075 CERS3Q8IU89 383 aa14.03□□□□□ -0.16
LRTM1-202ENST00000493075 CD99L2Q8TCZ2 262 aa14.03□□□□□ -0.16
LRTM1-202ENST00000493075 SH3RF3Q8TEJ3 882 aaPredicted RBP14.03□□□□□ -0.16
LRTM1-202ENST00000493075 AATFQ9NY61 560 aaKnown RBP eCLIP14.03□□□□□ -0.16
LRTM1-202ENST00000493075 PI4KBQ9UBF8 816 aa14.03□□□□□ -0.16
LRTM1-202ENST00000493075 AFG3L2Q9Y4W6 797 aa14.03□□□□□ -0.16
LRTM1-202ENST00000493075 OTOFQ9HC10 1997 aa14.02□□□□□ -0.16
LRTM1-202ENST00000493075 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.02□□□□□ -0.17
LRTM1-202ENST00000493075 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.02□□□□□ -0.17
LRTM1-202ENST00000493075 HERC5Q9UII4 1024 aaKnown RBP14.02□□□□□ -0.17
LRTM1-202ENST00000493075 PTPN22Q9Y2R2 807 aa14.02□□□□□ -0.17
LRTM1-202ENST00000493075 A0A0G2JLL6 359 aaPredicted RBP14.01□□□□□ -0.17
LRTM1-202ENST00000493075 PDHXO00330 501 aa14.01□□□□□ -0.17
LRTM1-202ENST00000493075 CYP7A1P22680 504 aa14.01□□□□□ -0.17
LRTM1-202ENST00000493075 MAP3K12Q12852 859 aa14.01□□□□□ -0.17
LRTM1-202ENST00000493075 TTF1Q15361 905 aaPredicted RBP14.01□□□□□ -0.17
LRTM1-202ENST00000493075 GPAT2Q6NUI2 795 aa14.01□□□□□ -0.17
LRTM1-202ENST00000493075 C17orf99Q6UX52 265 aa14.01□□□□□ -0.17
LRTM1-202ENST00000493075 PRRT2Q7Z6L0 340 aaPredicted RBP14.01□□□□□ -0.17
LRTM1-202ENST00000493075 ADGRA1Q86SQ6 560 aa14.01□□□□□ -0.17
LRTM1-202ENST00000493075 METTL16Q86W50 562 aaKnown RBP14.01□□□□□ -0.17
LRTM1-202ENST00000493075 FOXP4Q8IVH2 680 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms