RNA–Protein interactions for RNA: ENST00000492887.5

FDPS-218, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-218ENST00000492887 NCOA7Q8NI08 942 aa9.53□□□□□ -0.88
FDPS-218ENST00000492887 SH3RF3Q8TEJ3 882 aaPredicted RBP9.53□□□□□ -0.88
FDPS-218ENST00000492887 ZNF384Q8TF68 577 aa9.53□□□□□ -0.88
FDPS-218ENST00000492887 RIOK1Q9BRS2 568 aaKnown RBP9.53□□□□□ -0.88
FDPS-218ENST00000492887 TBC1D2Q9BYX2 928 aa9.53□□□□□ -0.88
FDPS-218ENST00000492887 EPB41L4AQ9HCS5 686 aaPredicted RBP9.53□□□□□ -0.88
FDPS-218ENST00000492887 DAGLAQ9Y4D2 1042 aa9.53□□□□□ -0.88
FDPS-218ENST00000492887 GJA3Q9Y6H8 435 aa9.53□□□□□ -0.88
FDPS-218ENST00000492887 ZMYM6O95789 1325 aa9.53□□□□□ -0.88
FDPS-218ENST00000492887 MYH15Q9Y2K3 1946 aa9.52□□□□□ -0.88
FDPS-218ENST00000492887 GSG1L2A8MUP6 293 aa9.52□□□□□ -0.89
FDPS-218ENST00000492887 POLR3DP05423 398 aaPredicted RBP9.52□□□□□ -0.89
FDPS-218ENST00000492887 PRR29P0C7W0 189 aa9.52□□□□□ -0.89
FDPS-218ENST00000492887 PPARAQ07869 468 aa9.52□□□□□ -0.89
FDPS-218ENST00000492887 TNIP1Q15025 636 aa9.52□□□□□ -0.89
FDPS-218ENST00000492887 DACT2Q5SW24 774 aa9.52□□□□□ -0.89
FDPS-218ENST00000492887 RSBN1LQ6PCB5 846 aaPredicted RBP9.52□□□□□ -0.89
FDPS-218ENST00000492887 RUFY3Q7L099 469 aa9.52□□□□□ -0.89
FDPS-218ENST00000492887 TGFBRAP1Q8WUH2 860 aa9.52□□□□□ -0.89
FDPS-218ENST00000492887 SNX21Q969T3 373 aa9.52□□□□□ -0.89
FDPS-218ENST00000492887 TCEANC2Q96MN5 208 aa9.52□□□□□ -0.89
FDPS-218ENST00000492887 SYT17Q9BSW7 474 aa9.52□□□□□ -0.89
FDPS-218ENST00000492887 TM6SF1Q9BZW5 370 aa9.52□□□□□ -0.89
FDPS-218ENST00000492887 ATP8A2Q9NTI2 1148 aa9.52□□□□□ -0.89
FDPS-218ENST00000492887 MCM9Q9NXL9 1143 aa9.52□□□□□ -0.89
FDPS-218ENST00000492887 TMOD2Q9NZR1 351 aa9.52□□□□□ -0.89
FDPS-218ENST00000492887 ARPP21Q9UBL0 812 aaPredicted RBP9.52□□□□□ -0.89
FDPS-218ENST00000492887 SAP30BPQ9UHR5 308 aaKnown RBP9.52□□□□□ -0.89
FDPS-218ENST00000492887 GAKO14976 1311 aa9.52□□□□□ -0.89
FDPS-218ENST00000492887 LTBP3Q9NS15 1303 aa9.52□□□□□ -0.89
FDPS-218ENST00000492887 SIPA1L1O43166 1804 aa9.52□□□□□ -0.89
FDPS-218ENST00000492887 TCHHQ07283 1943 aa9.51□□□□□ -0.89
FDPS-218ENST00000492887 HMGB1P09429 215 aaKnown RBP9.51□□□□□ -0.89
FDPS-218ENST00000492887 RPS6KB1P23443 525 aa9.51□□□□□ -0.89
FDPS-218ENST00000492887 AK2P54819 239 aa9.51□□□□□ -0.89
FDPS-218ENST00000492887 ANKRD1Q15327 319 aa9.51□□□□□ -0.89
FDPS-218ENST00000492887 ALX1Q15699 326 aa9.51□□□□□ -0.89
FDPS-218ENST00000492887 GPR162Q16538 588 aa9.51□□□□□ -0.89
FDPS-218ENST00000492887 CFAP100Q494V2 611 aa9.51□□□□□ -0.89
FDPS-218ENST00000492887 MFSD6Q6ZSS7 791 aa9.51□□□□□ -0.89
FDPS-218ENST00000492887 OGFOD1Q8N543 542 aa9.51□□□□□ -0.89
FDPS-218ENST00000492887 KCNB2Q92953 911 aa9.51□□□□□ -0.89
FDPS-218ENST00000492887 LRRC2Q9BYS8 371 aa9.51□□□□□ -0.89
FDPS-218ENST00000492887 SLKQ9H2G2 1235 aaPredicted RBP9.51□□□□□ -0.89
FDPS-218ENST00000492887 RNF41Q9H4P4 317 aaPredicted RBP9.51□□□□□ -0.89
FDPS-218ENST00000492887 USP40Q9NVE5 1235 aa9.51□□□□□ -0.89
FDPS-218ENST00000492887 GPR75-ASB3A0A0A6YYF3 556 aa9.5□□□□□ -0.89
FDPS-218ENST00000492887 ERICH2A1L162 156 aa9.5□□□□□ -0.89
FDPS-218ENST00000492887 B4E1Z4 1266 aa9.5□□□□□ -0.89
FDPS-218ENST00000492887 FOXP2O15409 715 aa9.5□□□□□ -0.89
FDPS-218ENST00000492887 CD2BP2O95400 341 aaKnown RBP9.5□□□□□ -0.89
FDPS-218ENST00000492887 GIMAP6Q6P9H5 292 aa9.5□□□□□ -0.89
FDPS-218ENST00000492887 HHIPL2Q6UWX4 724 aa9.5□□□□□ -0.89
FDPS-218ENST00000492887 Q6ZUG5 572 aa9.5□□□□□ -0.89
FDPS-218ENST00000492887 STOX1Q6ZVD7 989 aa9.5□□□□□ -0.89
FDPS-218ENST00000492887 CHST3Q7LGC8 479 aa9.5□□□□□ -0.89
FDPS-218ENST00000492887 TBC1D10CQ8IV04 446 aa9.5□□□□□ -0.89
FDPS-218ENST00000492887 ZSCAN29Q8IWY8 852 aaPredicted RBP9.5□□□□□ -0.89
FDPS-218ENST00000492887 LARP6Q9BRS8 491 aaKnown RBP9.5□□□□□ -0.89
FDPS-218ENST00000492887 TRIM34Q9BYJ4 488 aa9.5□□□□□ -0.89
FDPS-218ENST00000492887 KRT23Q9C075 422 aa9.5□□□□□ -0.89
FDPS-218ENST00000492887 CNNM2Q9H8M5 875 aa9.5□□□□□ -0.89
FDPS-218ENST00000492887 ZSWIM6Q9HCJ5 1215 aa9.5□□□□□ -0.89
FDPS-218ENST00000492887 DCP1AQ9NPI6 582 aaPredicted RBP9.5□□□□□ -0.89
FDPS-218ENST00000492887 TAF6LQ9Y6J9 622 aa9.5□□□□□ -0.89
FDPS-218ENST00000492887 CYP2D7A0A087X1C5 515 aa9.49□□□□□ -0.89
FDPS-218ENST00000492887 USP17L12C9JPN9 530 aa9.49□□□□□ -0.89
FDPS-218ENST00000492887 USP17L21D6R901 530 aa9.49□□□□□ -0.89
FDPS-218ENST00000492887 PRC1O43663 620 aa9.49□□□□□ -0.89
FDPS-218ENST00000492887 MYO1BO43795 1136 aa9.49□□□□□ -0.89
FDPS-218ENST00000492887 HLA-DOAP06340 250 aa9.49□□□□□ -0.89
FDPS-218ENST00000492887 VIL1P09327 827 aaKnown RBP9.49□□□□□ -0.89
FDPS-218ENST00000492887 USP17L8P0C7I0 530 aa9.49□□□□□ -0.89
FDPS-218ENST00000492887 CYP2D6P10635 497 aa9.49□□□□□ -0.89
FDPS-218ENST00000492887 LMNB1P20700 586 aa9.49□□□□□ -0.89
FDPS-218ENST00000492887 MCM5P33992 734 aa9.49□□□□□ -0.89
FDPS-218ENST00000492887 PPP4CP60510 307 aa9.49□□□□□ -0.89
FDPS-218ENST00000492887 PDE4BQ07343 736 aa9.49□□□□□ -0.89
FDPS-218ENST00000492887 DLGAP5Q15398 846 aa9.49□□□□□ -0.89
FDPS-218ENST00000492887 TSGA10IPQ3SY00 556 aa9.49□□□□□ -0.89
FDPS-218ENST00000492887 AKNAD1Q5T1N1 836 aa9.49□□□□□ -0.89
FDPS-218ENST00000492887 NFXL1Q6ZNB6 911 aa9.49□□□□□ -0.89
FDPS-218ENST00000492887 DHX32Q7L7V1 743 aaKnown RBP9.49□□□□□ -0.89
FDPS-218ENST00000492887 AGBL3Q8NEM8 1001 aa9.49□□□□□ -0.89
FDPS-218ENST00000492887 IL27Q8NEV9 243 aa9.49□□□□□ -0.89
FDPS-218ENST00000492887 STAG1Q8WVM7 1258 aa9.49□□□□□ -0.89
FDPS-218ENST00000492887 FAM163AQ96GL9 167 aaPredicted RBP9.49□□□□□ -0.89
FDPS-218ENST00000492887 VEZTQ9HBM0 779 aa9.49□□□□□ -0.89
FDPS-218ENST00000492887 RNF181Q9P0P0 153 aa9.49□□□□□ -0.89
FDPS-218ENST00000492887 FLT1P17948 1338 aa9.49□□□□□ -0.89
FDPS-218ENST00000492887 NEDD4P46934 1319 aa9.49□□□□□ -0.89
FDPS-218ENST00000492887 RANBP6O60518 1105 aaKnown RBP9.48□□□□□ -0.89
FDPS-218ENST00000492887 CACNB3P54284 484 aa9.48□□□□□ -0.89
FDPS-218ENST00000492887 HDLBPQ00341 1268 aaKnown RBP9.48□□□□□ -0.89
FDPS-218ENST00000492887 CXCL9Q07325 125 aa9.48□□□□□ -0.89
FDPS-218ENST00000492887 TCP10Q12799 353 aa9.48□□□□□ -0.89
FDPS-218ENST00000492887 STK3Q13188 491 aa9.48□□□□□ -0.89
FDPS-218ENST00000492887 SART3Q15020 963 aaKnown RBP9.48□□□□□ -0.89
FDPS-218ENST00000492887 RBM26Q5T8P6 1007 aaKnown RBP9.48□□□□□ -0.89
FDPS-218ENST00000492887 CTR9Q6PD62 1173 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms