RNA–Protein interactions for RNA: ENST00000492479.1

PTPRE-210, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 866 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-210ENST00000492479 GPC2Q8N158 579 aa16.26■□□□□ 0.19
PTPRE-210ENST00000492479 OGFOD1Q8N543 542 aa16.26■□□□□ 0.19
PTPRE-210ENST00000492479 SRCAPQ6ZRS2 3230 aa16.25■□□□□ 0.19
PTPRE-210ENST00000492479 MCM2P49736 904 aa16.25■□□□□ 0.19
PTPRE-210ENST00000492479 PPARAQ07869 468 aa16.25■□□□□ 0.19
PTPRE-210ENST00000492479 CFAP100Q494V2 611 aa16.25■□□□□ 0.19
PTPRE-210ENST00000492479 RUFY3Q7L099 469 aa16.25■□□□□ 0.19
PTPRE-210ENST00000492479 TBC1D10CQ8IV04 446 aa16.25■□□□□ 0.19
PTPRE-210ENST00000492479 JAKMIP1Q96N16 626 aaKnown RBP16.25■□□□□ 0.19
PTPRE-210ENST00000492479 ST18O60284 1047 aa16.24■□□□□ 0.19
PTPRE-210ENST00000492479 AKNAD1Q5T1N1 836 aa16.24■□□□□ 0.19
PTPRE-210ENST00000492479 C12orf60Q5U649 245 aa16.24■□□□□ 0.19
PTPRE-210ENST00000492479 TGFBRAP1Q8WUH2 860 aa16.24■□□□□ 0.19
PTPRE-210ENST00000492479 NEK1Q96PY6 1258 aa16.24■□□□□ 0.19
PTPRE-210ENST00000492479 MTA3Q9BTC8 594 aa16.24■□□□□ 0.19
PTPRE-210ENST00000492479 AGXT2Q9BYV1 514 aa16.24■□□□□ 0.19
PTPRE-210ENST00000492479 RNF41Q9H4P4 317 aaPredicted RBP16.24■□□□□ 0.19
PTPRE-210ENST00000492479 USP40Q9NVE5 1235 aa16.24■□□□□ 0.19
PTPRE-210ENST00000492479 ZBTB12Q9Y330 459 aaPredicted RBP16.24■□□□□ 0.19
PTPRE-210ENST00000492479 CYP46A1Q9Y6A2 500 aa16.24■□□□□ 0.19
PTPRE-210ENST00000492479 ATRNL1Q5VV63 1379 aa16.24■□□□□ 0.19
PTPRE-210ENST00000492479 USP17L12C9JPN9 530 aa16.23■□□□□ 0.19
PTPRE-210ENST00000492479 USP17L21D6R901 530 aa16.23■□□□□ 0.19
PTPRE-210ENST00000492479 CASTP20810 708 aaKnown RBP16.23■□□□□ 0.19
PTPRE-210ENST00000492479 RPS6KB1P23443 525 aa16.23■□□□□ 0.19
PTPRE-210ENST00000492479 USP5P45974 858 aa16.23■□□□□ 0.19
PTPRE-210ENST00000492479 GMPSP49915 693 aaPredicted RBP16.23■□□□□ 0.19
PTPRE-210ENST00000492479 EXOSC10Q01780 885 aaKnown RBP16.23■□□□□ 0.19
PTPRE-210ENST00000492479 SPDYE2Q495Y8 402 aa16.23■□□□□ 0.19
PTPRE-210ENST00000492479 BLOC1S2Q6QNY1 142 aa16.23■□□□□ 0.19
PTPRE-210ENST00000492479 MB21D2Q8IYB1 491 aaPredicted RBP16.23■□□□□ 0.19
PTPRE-210ENST00000492479 CNNM2Q9H8M5 875 aa16.23■□□□□ 0.19
PTPRE-210ENST00000492479 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.23■□□□□ 0.19
PTPRE-210ENST00000492479 SIPA1L1O43166 1804 aa16.22■□□□□ 0.19
PTPRE-210ENST00000492479 ORC4O43929 436 aa16.22■□□□□ 0.19
PTPRE-210ENST00000492479 ENTPD3O75355 529 aa16.22■□□□□ 0.19
PTPRE-210ENST00000492479 NEK4P51957 841 aa16.22■□□□□ 0.19
PTPRE-210ENST00000492479 DLGAP5Q15398 846 aa16.22■□□□□ 0.19
PTPRE-210ENST00000492479 GPR162Q16538 588 aa16.22■□□□□ 0.19
PTPRE-210ENST00000492479 DHX32Q7L7V1 743 aaKnown RBP16.22■□□□□ 0.19
PTPRE-210ENST00000492479 NCOA7Q8NI08 942 aa16.22■□□□□ 0.19
PTPRE-210ENST00000492479 PRMT6Q96LA8 375 aaPredicted RBP16.22■□□□□ 0.19
PTPRE-210ENST00000492479 MYOZ2Q9NPC6 264 aa16.22■□□□□ 0.19
PTPRE-210ENST00000492479 DDX4Q9NQI0 724 aaKnown RBP16.22■□□□□ 0.19
PTPRE-210ENST00000492479 MCM9Q9NXL9 1143 aa16.22■□□□□ 0.19
PTPRE-210ENST00000492479 RNF181Q9P0P0 153 aa16.22■□□□□ 0.19
PTPRE-210ENST00000492479 HAND2P61296 217 aa16.21■□□□□ 0.19
PTPRE-210ENST00000492479 BECN1Q14457 450 aa16.21■□□□□ 0.19
PTPRE-210ENST00000492479 C9orf131Q5VYM1 1079 aa16.21■□□□□ 0.19
PTPRE-210ENST00000492479 AMOTL1Q8IY63 956 aa16.21■□□□□ 0.19
PTPRE-210ENST00000492479 L3MBTL3Q96JM7 780 aaPredicted RBP16.21■□□□□ 0.19
PTPRE-210ENST00000492479 IPO9Q96P70 1041 aaKnown RBP16.21■□□□□ 0.19
PTPRE-210ENST00000492479 TBC1D2Q9BYX2 928 aa16.21■□□□□ 0.19
PTPRE-210ENST00000492479 UPF3BQ9BZI7 483 aaKnown RBP16.21■□□□□ 0.19
PTPRE-210ENST00000492479 KRT23Q9C075 422 aa16.21■□□□□ 0.19
PTPRE-210ENST00000492479 OSBPL5Q9H0X9 879 aaPredicted RBP16.21■□□□□ 0.19
PTPRE-210ENST00000492479 EHD4Q9H223 541 aa16.21■□□□□ 0.19
PTPRE-210ENST00000492479 DHX36Q9H2U1 1008 aaKnown RBP16.21■□□□□ 0.19
PTPRE-210ENST00000492479 GPRC5DQ9NZD1 345 aa16.21■□□□□ 0.19
PTPRE-210ENST00000492479 PCDHAC2Q9Y5I4 1007 aa16.21■□□□□ 0.19
PTPRE-210ENST00000492479 TACC3Q9Y6A5 838 aa16.21■□□□□ 0.19
PTPRE-210ENST00000492479 CD2BP2O95400 341 aaKnown RBP16.2■□□□□ 0.18
PTPRE-210ENST00000492479 SLC3A2P08195 630 aaKnown RBP16.2■□□□□ 0.18
PTPRE-210ENST00000492479 GABPAQ06546 454 aa16.2■□□□□ 0.18
PTPRE-210ENST00000492479 MFSD6Q6ZSS7 791 aa16.2■□□□□ 0.18
PTPRE-210ENST00000492479 FAM83AQ86UY5 434 aa16.2■□□□□ 0.18
PTPRE-210ENST00000492479 METTL16Q86W50 562 aaKnown RBP16.2■□□□□ 0.18
PTPRE-210ENST00000492479 MAPKAPK5Q8IW41 473 aa16.2■□□□□ 0.18
PTPRE-210ENST00000492479 MICALL2Q8IY33 904 aa16.2■□□□□ 0.18
PTPRE-210ENST00000492479 FAM198AQ9UFP1 575 aa16.2■□□□□ 0.18
PTPRE-210ENST00000492479 NEDD4P46934 1319 aa16.19■□□□□ 0.18
PTPRE-210ENST00000492479 WNT10BO00744 389 aa16.19■□□□□ 0.18
PTPRE-210ENST00000492479 MCM5P33992 734 aa16.19■□□□□ 0.18
PTPRE-210ENST00000492479 RBM5P52756 815 aaKnown RBP eCLIP16.19■□□□□ 0.18
PTPRE-210ENST00000492479 EVCP57679 992 aa16.19■□□□□ 0.18
PTPRE-210ENST00000492479 NFIAQ12857 509 aa16.19■□□□□ 0.18
PTPRE-210ENST00000492479 TRDNQ13061 729 aa16.19■□□□□ 0.18
PTPRE-210ENST00000492479 COL9A3Q14050 684 aaPredicted RBP16.19■□□□□ 0.18
PTPRE-210ENST00000492479 ANKRD1Q15327 319 aa16.19■□□□□ 0.18
PTPRE-210ENST00000492479 C16orf86Q6ZW13 317 aa16.19■□□□□ 0.18
PTPRE-210ENST00000492479 RALYLQ86SE5 291 aaKnown RBP16.19■□□□□ 0.18
PTPRE-210ENST00000492479 TTC6Q86TZ1 520 aa16.19■□□□□ 0.18
PTPRE-210ENST00000492479 PDRG1Q9NUG6 133 aa16.19■□□□□ 0.18
PTPRE-210ENST00000492479 ZNF70Q9UC06 446 aaPredicted RBP16.19■□□□□ 0.18
PTPRE-210ENST00000492479 CNOT7Q9UIV1 285 aaKnown RBP16.19■□□□□ 0.18
PTPRE-210ENST00000492479 SCN4AP35499 1836 aa16.19■□□□□ 0.18
PTPRE-210ENST00000492479 MINDY4BA8MYZ0 360 aa16.18■□□□□ 0.18
PTPRE-210ENST00000492479 K7ELQ4 463 aaPredicted RBP16.18■□□□□ 0.18
PTPRE-210ENST00000492479 ANTXR2P58335 489 aa16.18■□□□□ 0.18
PTPRE-210ENST00000492479 CTDSPL2Q05D32 466 aa16.18■□□□□ 0.18
PTPRE-210ENST00000492479 PDE4BQ07343 736 aa16.18■□□□□ 0.18
PTPRE-210ENST00000492479 HSCBQ8IWL3 235 aa16.18■□□□□ 0.18
PTPRE-210ENST00000492479 TDRD3Q9H7E2 651 aaKnown RBP16.18■□□□□ 0.18
PTPRE-210ENST00000492479 ZNF287Q9HBT7 754 aa16.18■□□□□ 0.18
PTPRE-210ENST00000492479 TMOD2Q9NZR1 351 aa16.18■□□□□ 0.18
PTPRE-210ENST00000492479 GREB1LQ9C091 1923 aaPredicted RBP16.17■□□□□ 0.18
PTPRE-210ENST00000492479 WDR90Q96KV7 1748 aa16.17■□□□□ 0.18
PTPRE-210ENST00000492479 CNTNAP1P78357 1384 aa16.17■□□□□ 0.18
PTPRE-210ENST00000492479 PLIN4Q96Q06 1357 aa16.17■□□□□ 0.18
PTPRE-210ENST00000492479 CYP2D7A0A087X1C5 515 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms