RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-222ENST00000492423 NACAP1Q9BZK3 213 aa17.72■□□□□ 0.43
COPS7B-222ENST00000492423 ATP8A2Q9NTI2 1148 aa17.72■□□□□ 0.43
COPS7B-222ENST00000492423 ZNF541Q9H0D2 1346 aa17.72■□□□□ 0.43
COPS7B-222ENST00000492423 E7EWF7 191 aa17.71■□□□□ 0.43
COPS7B-222ENST00000492423 CPA1P15085 419 aa17.71■□□□□ 0.43
COPS7B-222ENST00000492423 LMNB1P20700 586 aa17.71■□□□□ 0.43
COPS7B-222ENST00000492423 KRT32Q14532 448 aa17.71■□□□□ 0.43
COPS7B-222ENST00000492423 TTC14Q96N46 770 aa17.71■□□□□ 0.43
COPS7B-222ENST00000492423 ZSWIM6Q9HCJ5 1215 aa17.71■□□□□ 0.43
COPS7B-222ENST00000492423 SERPINA10Q9UK55 444 aa17.71■□□□□ 0.43
COPS7B-222ENST00000492423 TACC3Q9Y6A5 838 aa17.71■□□□□ 0.43
COPS7B-222ENST00000492423 CASTP20810 708 aaKnown RBP17.7■□□□□ 0.42
COPS7B-222ENST00000492423 TEX11Q8IYF3 940 aa17.7■□□□□ 0.42
COPS7B-222ENST00000492423 IPO9Q96P70 1041 aaKnown RBP17.7■□□□□ 0.42
COPS7B-222ENST00000492423 TBC1D2Q9BYX2 928 aa17.7■□□□□ 0.42
COPS7B-222ENST00000492423 CYP2D7A0A087X1C5 515 aa17.69■□□□□ 0.42
COPS7B-222ENST00000492423 SMIM22K7EJ46 135 aa17.69■□□□□ 0.42
COPS7B-222ENST00000492423 ZNF213O14771 459 aa17.69■□□□□ 0.42
COPS7B-222ENST00000492423 PSMA5P28066 241 aa17.69■□□□□ 0.42
COPS7B-222ENST00000492423 USP5P45974 858 aa17.69■□□□□ 0.42
COPS7B-222ENST00000492423 NEK4P51957 841 aa17.69■□□□□ 0.42
COPS7B-222ENST00000492423 EIF6P56537 245 aaKnown RBP17.69■□□□□ 0.42
COPS7B-222ENST00000492423 CTDSPL2Q05D32 466 aa17.69■□□□□ 0.42
COPS7B-222ENST00000492423 PPARAQ07869 468 aa17.69■□□□□ 0.42
COPS7B-222ENST00000492423 TNIP1Q15025 636 aa17.69■□□□□ 0.42
COPS7B-222ENST00000492423 CFAP100Q494V2 611 aa17.69■□□□□ 0.42
COPS7B-222ENST00000492423 CDC42EP5Q6NZY7 148 aa17.69■□□□□ 0.42
COPS7B-222ENST00000492423 CTR9Q6PD62 1173 aa17.69■□□□□ 0.42
COPS7B-222ENST00000492423 TGFBRAP1Q8WUH2 860 aa17.69■□□□□ 0.42
COPS7B-222ENST00000492423 NEK1Q96PY6 1258 aa17.69■□□□□ 0.42
COPS7B-222ENST00000492423 ANAPC4Q9UJX5 808 aa17.69■□□□□ 0.42
COPS7B-222ENST00000492423 FLT1P17948 1338 aa17.69■□□□□ 0.42
COPS7B-222ENST00000492423 WDHD1O75717 1129 aaPredicted RBP17.68■□□□□ 0.42
COPS7B-222ENST00000492423 SBK1Q52WX2 424 aa17.68■□□□□ 0.42
COPS7B-222ENST00000492423 RUFY3Q7L099 469 aa17.68■□□□□ 0.42
COPS7B-222ENST00000492423 MAPKAPK5Q8IW41 473 aa17.68■□□□□ 0.42
COPS7B-222ENST00000492423 ARPP21Q9UBL0 812 aaPredicted RBP17.68■□□□□ 0.42
COPS7B-222ENST00000492423 NEDD4P46934 1319 aa17.68■□□□□ 0.42
COPS7B-222ENST00000492423 ROBO3Q96MS0 1386 aa17.67■□□□□ 0.42
COPS7B-222ENST00000492423 SHTN1A0MZ66 631 aa17.67■□□□□ 0.42
COPS7B-222ENST00000492423 USP17L12C9JPN9 530 aa17.67■□□□□ 0.42
COPS7B-222ENST00000492423 USP17L21D6R901 530 aa17.67■□□□□ 0.42
COPS7B-222ENST00000492423 USP17L8P0C7I0 530 aa17.67■□□□□ 0.42
COPS7B-222ENST00000492423 CYP2D6P10635 497 aa17.67■□□□□ 0.42
COPS7B-222ENST00000492423 RPS6KB1P23443 525 aa17.67■□□□□ 0.42
COPS7B-222ENST00000492423 RPS12P25398 132 aaKnown RBP17.67■□□□□ 0.42
COPS7B-222ENST00000492423 BLOC1S2Q6QNY1 142 aa17.67■□□□□ 0.42
COPS7B-222ENST00000492423 MB21D2Q8IYB1 491 aaPredicted RBP17.67■□□□□ 0.42
COPS7B-222ENST00000492423 NKX2-3Q8TAU0 364 aa17.67■□□□□ 0.42
COPS7B-222ENST00000492423 STAG1Q8WVM7 1258 aa17.67■□□□□ 0.42
COPS7B-222ENST00000492423 ZBED3Q96IU2 234 aaPredicted RBP17.67■□□□□ 0.42
COPS7B-222ENST00000492423 DDX4Q9NQI0 724 aaKnown RBP17.67■□□□□ 0.42
COPS7B-222ENST00000492423 USP40Q9NVE5 1235 aa17.67■□□□□ 0.42
COPS7B-222ENST00000492423 HDAC9Q9UKV0 1011 aa17.67■□□□□ 0.42
COPS7B-222ENST00000492423 CYP46A1Q9Y6A2 500 aa17.67■□□□□ 0.42
COPS7B-222ENST00000492423 ST18O60284 1047 aa17.66■□□□□ 0.42
COPS7B-222ENST00000492423 RBM5P52756 815 aaKnown RBP eCLIP17.66■□□□□ 0.42
COPS7B-222ENST00000492423 HSCBQ8IWL3 235 aa17.66■□□□□ 0.42
COPS7B-222ENST00000492423 MTMR14Q8NCE2 650 aa17.66■□□□□ 0.42
COPS7B-222ENST00000492423 IL27Q8NEV9 243 aa17.66■□□□□ 0.42
COPS7B-222ENST00000492423 C19orf67A6NJJ6 358 aa17.65■□□□□ 0.42
COPS7B-222ENST00000492423 MINDY4BA8MYZ0 360 aa17.65■□□□□ 0.42
COPS7B-222ENST00000492423 GMPSP49915 693 aaPredicted RBP17.65■□□□□ 0.42
COPS7B-222ENST00000492423 ZNF280AP59817 542 aaPredicted RBP17.65■□□□□ 0.42
COPS7B-222ENST00000492423 BECN1Q14457 450 aa17.65■□□□□ 0.42
COPS7B-222ENST00000492423 AKNAD1Q5T1N1 836 aa17.65■□□□□ 0.42
COPS7B-222ENST00000492423 C12orf60Q5U649 245 aa17.65■□□□□ 0.42
COPS7B-222ENST00000492423 PRMT6Q96LA8 375 aaPredicted RBP17.65■□□□□ 0.42
COPS7B-222ENST00000492423 TCEANC2Q96MN5 208 aa17.65■□□□□ 0.42
COPS7B-222ENST00000492423 INCENPQ9NQS7 918 aa17.65■□□□□ 0.42
COPS7B-222ENST00000492423 PDRG1Q9NUG6 133 aa17.65■□□□□ 0.42
COPS7B-222ENST00000492423 MCM9Q9NXL9 1143 aa17.65■□□□□ 0.42
COPS7B-222ENST00000492423 RNF181Q9P0P0 153 aa17.65■□□□□ 0.42
COPS7B-222ENST00000492423 K7ELQ4 463 aaPredicted RBP17.64■□□□□ 0.41
COPS7B-222ENST00000492423 FGRP09769 529 aa17.64■□□□□ 0.41
COPS7B-222ENST00000492423 AK2P54819 239 aa17.64■□□□□ 0.41
COPS7B-222ENST00000492423 ANTXR2P58335 489 aa17.64■□□□□ 0.41
COPS7B-222ENST00000492423 EXOSC10Q01780 885 aaKnown RBP17.64■□□□□ 0.41
COPS7B-222ENST00000492423 NFIAQ12857 509 aa17.64■□□□□ 0.41
COPS7B-222ENST00000492423 NCOA7Q8NI08 942 aa17.64■□□□□ 0.41
COPS7B-222ENST00000492423 DPF2Q92785 391 aa17.64■□□□□ 0.41
COPS7B-222ENST00000492423 ALDH8A1Q9H2A2 487 aaPredicted RBP17.64■□□□□ 0.41
COPS7B-222ENST00000492423 SAP30BPQ9UHR5 308 aaKnown RBP17.64■□□□□ 0.41
COPS7B-222ENST00000492423 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.64■□□□□ 0.41
COPS7B-222ENST00000492423 GJA3Q9Y6H8 435 aa17.64■□□□□ 0.41
COPS7B-222ENST00000492423 COL2A1P02458 1487 aaPredicted RBP17.63■□□□□ 0.41
COPS7B-222ENST00000492423 GREB1LQ9C091 1923 aaPredicted RBP17.63■□□□□ 0.41
COPS7B-222ENST00000492423 B4E1Z4 1266 aa17.63■□□□□ 0.41
COPS7B-222ENST00000492423 HMGB1P09429 215 aaKnown RBP17.63■□□□□ 0.41
COPS7B-222ENST00000492423 SLC4A3P48751 1232 aa17.63■□□□□ 0.41
COPS7B-222ENST00000492423 PICALMQ13492 652 aa17.63■□□□□ 0.41
COPS7B-222ENST00000492423 DLGAP5Q15398 846 aa17.63■□□□□ 0.41
COPS7B-222ENST00000492423 GPR162Q16538 588 aa17.63■□□□□ 0.41
COPS7B-222ENST00000492423 C9orf131Q5VYM1 1079 aa17.63■□□□□ 0.41
COPS7B-222ENST00000492423 DHX32Q7L7V1 743 aaKnown RBP17.63■□□□□ 0.41
COPS7B-222ENST00000492423 OGFOD1Q8N543 542 aa17.63■□□□□ 0.41
COPS7B-222ENST00000492423 IDI2Q9BXS1 227 aa17.63■□□□□ 0.41
COPS7B-222ENST00000492423 OSBPL5Q9H0X9 879 aaPredicted RBP17.63■□□□□ 0.41
COPS7B-222ENST00000492423 TDRD3Q9H7E2 651 aaKnown RBP17.63■□□□□ 0.41
COPS7B-222ENST00000492423 FAM198AQ9UFP1 575 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms