RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	TAOK2	Q9UL54	1235 aa		24.17	■■□□□ 1.46
CDK5RAP2-218	ENST00000491334	PTPRA	P18433	802 aa		24.16	■■□□□ 1.46
CDK5RAP2-218	ENST00000491334	SCYL3	Q8IZE3	742 aa		24.16	■■□□□ 1.46
CDK5RAP2-218	ENST00000491334	FAM198A	Q9UFP1	575 aa		24.16	■■□□□ 1.46
CDK5RAP2-218	ENST00000491334	STXBP5L	Q9Y2K9	1186 aa		24.16	■■□□□ 1.46
CDK5RAP2-218	ENST00000491334	AFG3L2	Q9Y4W6	797 aa		24.16	■■□□□ 1.46
CDK5RAP2-218	ENST00000491334	AK9	Q5TCS8	1911 aa		24.16	■■□□□ 1.46
CDK5RAP2-218	ENST00000491334	UTY	O14607	1347 aa		24.15	■■□□□ 1.46
CDK5RAP2-218	ENST00000491334	PHF20L1	A8MW92	1017 aa		24.15	■■□□□ 1.46
CDK5RAP2-218	ENST00000491334	ANKLE1	Q8NAG6	615 aa		24.15	■■□□□ 1.46
CDK5RAP2-218	ENST00000491334	MGAM	O43451	1857 aa		24.14	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	FGFR2	P21802	821 aa		24.14	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	DIXDC1	Q155Q3	683 aa		24.14	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	LRIT3	Q3SXY7	679 aa		24.14	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	SLC5A1	P13866	664 aa		24.13	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	C7orf61	Q8IZ16	206 aa		24.13	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	24.13	■■□□□ 1.45	1e-5	■■■□□ 18
CDK5RAP2-218	ENST00000491334	LRRFIP2	Q9Y608	721 aa	Known RBP	24.13	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	LDHB	P07195	334 aa	Known RBP	24.12	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	ZFPM1	Q8IX07	1006 aa		24.12	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	DIS3L	Q8TF46	1054 aa	Known RBP	24.12	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	LPIN2	Q92539	896 aa		24.12	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	NBPF3	Q9H094	633 aa		24.12	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	24.12	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	ANKRD13C	Q8N6S4	541 aa		24.11	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	ANKRD44	Q8N8A2	993 aa		24.11	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	SALL2	Q9Y467	1007 aa	Predicted RBP	24.11	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	CTNND1	O60716	968 aa	Known RBP	24.1	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	ENTPD3	O75355	529 aa		24.1	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334		Q7L0L9	218 aa		24.1	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	24.1	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	KLHDC4	Q8TBB5	520 aa		24.1	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	PRDX5	P30044	214 aa		24.09	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	MAP3K10	Q02779	954 aa		24.09	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	TDH	Q8IZJ6	230 aa		24.09	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	IDI2	Q9BXS1	227 aa		24.09	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	HMX1	Q9NP08	348 aa	Predicted RBP	24.09	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	GNL3L	Q9NVN8	582 aa	Known RBP	24.09	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	MTMR10	Q9NXD2	777 aa		24.09	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	PNMA3	Q9UL41	463 aa		24.09	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	AGTPBP1	Q9UPW5	1226 aa		24.09	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	RPTOR	Q8N122	1335 aa		24.09	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	TRIM75P	A6NK02	468 aa		24.08	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	HMGCR	P04035	888 aa		24.08	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	RGS3	P49796	1198 aa		24.08	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	FAM110C	Q1W6H9	321 aa		24.08	■■□□□ 1.45
CDK5RAP2-218	ENST00000491334	CCDC184	Q52MB2	194 aa		24.07	■■□□□ 1.44
CDK5RAP2-218	ENST00000491334	C11orf49	Q9H6J7	331 aa		24.07	■■□□□ 1.44
CDK5RAP2-218	ENST00000491334	SPINK5	Q9NQ38	1064 aa	Predicted RBP	24.07	■■□□□ 1.44
CDK5RAP2-218	ENST00000491334	ATRNL1	Q5VV63	1379 aa		24.06	■■□□□ 1.44
CDK5RAP2-218	ENST00000491334	EYA2	O00167	538 aa		24.06	■■□□□ 1.44
CDK5RAP2-218	ENST00000491334	SYN1	P17600	705 aa		24.06	■■□□□ 1.44
CDK5RAP2-218	ENST00000491334	MAGEA10	P43363	369 aa	Predicted RBP	24.06	■■□□□ 1.44
CDK5RAP2-218	ENST00000491334	UBE2O	Q9C0C9	1292 aa	Known RBP	24.06	■■□□□ 1.44
CDK5RAP2-218	ENST00000491334	GCLC	P48506	637 aa	Predicted RBP	24.05	■■□□□ 1.44
CDK5RAP2-218	ENST00000491334	DOCK3	Q8IZD9	2030 aa		24.05	■■□□□ 1.44
CDK5RAP2-218	ENST00000491334	SH3BP5L	Q7L8J4	393 aa		24.04	■■□□□ 1.44
CDK5RAP2-218	ENST00000491334	DENND2A	Q9ULE3	1009 aa		24.04	■■□□□ 1.44
CDK5RAP2-218	ENST00000491334	SALL1	Q9NSC2	1324 aa		24.04	■■□□□ 1.44
CDK5RAP2-218	ENST00000491334	PABPC4	Q13310	644 aa	Known RBP eCLIP	24.03	■■□□□ 1.44
CDK5RAP2-218	ENST00000491334	SLF2	Q8IX21	1173 aa		24.03	■■□□□ 1.44
CDK5RAP2-218	ENST00000491334	PROCA1	Q8NCQ7	364 aa	Predicted RBP	24.03	■■□□□ 1.44
CDK5RAP2-218	ENST00000491334	GJD2	Q9UKL4	321 aa		24.03	■■□□□ 1.44
CDK5RAP2-218	ENST00000491334	DDTL	A6NHG4	134 aa	Predicted RBP	24.02	■■□□□ 1.44
CDK5RAP2-218	ENST00000491334	SEMA3E	O15041	775 aa		24.02	■■□□□ 1.44
CDK5RAP2-218	ENST00000491334	TREML2	Q5T2D2	321 aa		24.02	■■□□□ 1.44
CDK5RAP2-218	ENST00000491334	ZGPAT	Q8N5A5	531 aa	Known RBP	24.02	■■□□□ 1.44
CDK5RAP2-218	ENST00000491334	COL25A1	Q9BXS0	654 aa	Predicted RBP	24.02	■■□□□ 1.44
CDK5RAP2-218	ENST00000491334	OGDHL	Q9ULD0	1010 aa		24.02	■■□□□ 1.44
CDK5RAP2-218	ENST00000491334	ALPK3	Q96L96	1907 aa		24.01	■■□□□ 1.43
CDK5RAP2-218	ENST00000491334	ATP2B3	Q16720	1220 aa		24	■■□□□ 1.43
CDK5RAP2-218	ENST00000491334	USP44	Q9H0E7	712 aa		24	■■□□□ 1.43
CDK5RAP2-218	ENST00000491334	CEP126	Q9P2H0	1117 aa		24	■■□□□ 1.43
CDK5RAP2-218	ENST00000491334	TBC1D12	O60347	775 aa		23.99	■■□□□ 1.43
CDK5RAP2-218	ENST00000491334	RFX5	P48382	616 aa	Predicted RBP	23.99	■■□□□ 1.43
CDK5RAP2-218	ENST00000491334	TRIM32	Q13049	653 aa		23.99	■■□□□ 1.43
CDK5RAP2-218	ENST00000491334	SPP2	Q13103	211 aa		23.99	■■□□□ 1.43
CDK5RAP2-218	ENST00000491334	ATG9A	Q7Z3C6	839 aa		23.99	■■□□□ 1.43
CDK5RAP2-218	ENST00000491334	FAM163A	Q96GL9	167 aa	Predicted RBP	23.99	■■□□□ 1.43
CDK5RAP2-218	ENST00000491334	TBC1D2	Q9BYX2	928 aa		23.99	■■□□□ 1.43
CDK5RAP2-218	ENST00000491334	GAK	O14976	1311 aa		23.99	■■□□□ 1.43
CDK5RAP2-218	ENST00000491334	UNC80	Q8N2C7	3258 aa		23.99	■■□□□ 1.43
CDK5RAP2-218	ENST00000491334	PICALM	Q13492	652 aa		23.98	■■□□□ 1.43
CDK5RAP2-218	ENST00000491334	CCDC84	Q86UT8	332 aa	Predicted RBP	23.98	■■□□□ 1.43
CDK5RAP2-218	ENST00000491334	DZIP1	Q86YF9	867 aa	Known RBP	23.98	■■□□□ 1.43
CDK5RAP2-218	ENST00000491334	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	23.98	■■□□□ 1.43
CDK5RAP2-218	ENST00000491334	ZNF280C	Q8ND82	737 aa		23.98	■■□□□ 1.43
CDK5RAP2-218	ENST00000491334	FBXO3	Q9UK99	471 aa		23.98	■■□□□ 1.43
CDK5RAP2-218	ENST00000491334	SLURP2	P0DP57	97 aa		23.97	■■□□□ 1.43
CDK5RAP2-218	ENST00000491334	OSBPL5	Q9H0X9	879 aa	Predicted RBP	23.97	■■□□□ 1.43
CDK5RAP2-218	ENST00000491334	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	23.97	■■□□□ 1.43
CDK5RAP2-218	ENST00000491334	DDX4	Q9NQI0	724 aa	Known RBP	23.97	■■□□□ 1.43
CDK5RAP2-218	ENST00000491334	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	23.97	■■□□□ 1.43
CDK5RAP2-218	ENST00000491334	SPTY2D1	Q68D10	685 aa	Predicted RBP	23.96	■■□□□ 1.43
CDK5RAP2-218	ENST00000491334	ASCC2	Q9H1I8	757 aa	Predicted RBP	23.96	■■□□□ 1.43
CDK5RAP2-218	ENST00000491334	MYH13	Q9UKX3	1938 aa		23.96	■■□□□ 1.43
CDK5RAP2-218	ENST00000491334	PTPRC	P08575	1304 aa		23.95	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	ZBTB22	O15209	634 aa		23.95	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	CIAO1	O76071	339 aa		23.95	■■□□□ 1.42
CDK5RAP2-218	ENST00000491334	PHKA1	P46020	1223 aa		23.95	■■□□□ 1.42

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms