RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 MGAMO43451 1857 aa19.2■□□□□ 0.66
SCAMP3-208ENST00000490999 MYH13Q9UKX3 1938 aa19.2■□□□□ 0.66
SCAMP3-208ENST00000490999 CXCL11O14625 94 aa19.2■□□□□ 0.66
SCAMP3-208ENST00000490999 TFRCP02786 760 aaKnown RBP19.2■□□□□ 0.66
SCAMP3-208ENST00000490999 SCYL3Q8IZE3 742 aa19.2■□□□□ 0.66
SCAMP3-208ENST00000490999 SMCR8Q8TEV9 937 aaPredicted RBP19.2■□□□□ 0.66
SCAMP3-208ENST00000490999 PICK1Q9NRD5 415 aa19.2■□□□□ 0.66
SCAMP3-208ENST00000490999 UNC80Q8N2C7 3258 aa19.19■□□□□ 0.66
SCAMP3-208ENST00000490999 TRIM75PA6NK02 468 aa19.19■□□□□ 0.66
SCAMP3-208ENST00000490999 PHF20L1A8MW92 1017 aa19.19■□□□□ 0.66
SCAMP3-208ENST00000490999 PTPRAP18433 802 aa19.19■□□□□ 0.66
SCAMP3-208ENST00000490999 RGS3P49796 1198 aa19.19■□□□□ 0.66
SCAMP3-208ENST00000490999 LPIN2Q92539 896 aa19.19■□□□□ 0.66
SCAMP3-208ENST00000490999 PAWRQ96IZ0 340 aaKnown RBP19.19■□□□□ 0.66
SCAMP3-208ENST00000490999 RFX7Q2KHR2 1363 aa19.19■□□□□ 0.66
SCAMP3-208ENST00000490999 EYA2O00167 538 aa19.18■□□□□ 0.66
SCAMP3-208ENST00000490999 LDHBP07195 334 aaKnown RBP19.18■□□□□ 0.66
SCAMP3-208ENST00000490999 SH3BP5LQ7L8J4 393 aa19.18■□□□□ 0.66
SCAMP3-208ENST00000490999 C7orf61Q8IZ16 206 aa19.18■□□□□ 0.66
SCAMP3-208ENST00000490999 SIL1Q9H173 461 aa19.18■□□□□ 0.66
SCAMP3-208ENST00000490999 PAK6Q9NQU5 681 aaPredicted RBP19.18■□□□□ 0.66
SCAMP3-208ENST00000490999 ZMYND8Q9ULU4 1186 aaPredicted RBP19.18■□□□□ 0.66
SCAMP3-208ENST00000490999 A0A1W2PPC1 479 aa19.17■□□□□ 0.66
SCAMP3-208ENST00000490999 RFX5P48382 616 aaPredicted RBP19.17■□□□□ 0.66
SCAMP3-208ENST00000490999 FASTKD5Q7L8L6 764 aaKnown RBP19.17■□□□□ 0.66
SCAMP3-208ENST00000490999 ANKRD13CQ8N6S4 541 aa19.17■□□□□ 0.66
SCAMP3-208ENST00000490999 AFG3L2Q9Y4W6 797 aa19.17■□□□□ 0.66
SCAMP3-208ENST00000490999 AK9Q5TCS8 1911 aa19.16■□□□□ 0.66
SCAMP3-208ENST00000490999 ALPK3Q96L96 1907 aa19.16■□□□□ 0.66
SCAMP3-208ENST00000490999 TREML2Q5T2D2 321 aa19.16■□□□□ 0.66
SCAMP3-208ENST00000490999 ATG9AQ7Z3C6 839 aa19.16■□□□□ 0.66
SCAMP3-208ENST00000490999 ZSCAN29Q8IWY8 852 aaPredicted RBP19.16■□□□□ 0.66
SCAMP3-208ENST00000490999 DDTLA6NHG4 134 aaPredicted RBP19.15■□□□□ 0.66
SCAMP3-208ENST00000490999 PHKA1P46020 1223 aa19.15■□□□□ 0.66
SCAMP3-208ENST00000490999 PICALMQ13492 652 aa19.15■□□□□ 0.66
SCAMP3-208ENST00000490999 IRF5Q13568 498 aa19.15■□□□□ 0.66
SCAMP3-208ENST00000490999 ATP2B3Q16720 1220 aa19.15■□□□□ 0.66
SCAMP3-208ENST00000490999 Q7L0L9 218 aa19.15■□□□□ 0.66
SCAMP3-208ENST00000490999 MRPL50Q8N5N7 158 aaKnown RBP19.15■□□□□ 0.66
SCAMP3-208ENST00000490999 PXYLP1Q8TE99 480 aa19.15■□□□□ 0.66
SCAMP3-208ENST00000490999 CRISPLD2Q9H0B8 497 aa19.15■□□□□ 0.66
SCAMP3-208ENST00000490999 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.15■□□□□ 0.663e-8■■■■■ 46.9
SCAMP3-208ENST00000490999 USP44Q9H0E7 712 aa19.15■□□□□ 0.66
SCAMP3-208ENST00000490999 DDX4Q9NQI0 724 aaKnown RBP19.15■□□□□ 0.66
SCAMP3-208ENST00000490999 LRRFIP2Q9Y608 721 aaKnown RBP19.15■□□□□ 0.66
SCAMP3-208ENST00000490999 DOCK1Q14185 1865 aa19.15■□□□□ 0.66
SCAMP3-208ENST00000490999 FAM196BA6NMK8 535 aa19.14■□□□□ 0.65
SCAMP3-208ENST00000490999 SYN1P17600 705 aa19.13■□□□□ 0.65
SCAMP3-208ENST00000490999 ADORA1P30542 326 aa19.13■□□□□ 0.65
SCAMP3-208ENST00000490999 TRIM32Q13049 653 aa19.13■□□□□ 0.65
SCAMP3-208ENST00000490999 IDI2Q9BXS1 227 aa19.13■□□□□ 0.65
SCAMP3-208ENST00000490999 AGTPBP1Q9UPW5 1226 aa19.13■□□□□ 0.65
SCAMP3-208ENST00000490999 SLC45A1Q9Y2W3 748 aa19.13■□□□□ 0.65
SCAMP3-208ENST00000490999 PTPRFP10586 1907 aa19.13■□□□□ 0.65
SCAMP3-208ENST00000490999 GAKO14976 1311 aa19.12■□□□□ 0.65
SCAMP3-208ENST00000490999 SALL1Q9NSC2 1324 aa19.12■□□□□ 0.65
SCAMP3-208ENST00000490999 ENTPD3O75355 529 aa19.12■□□□□ 0.65
SCAMP3-208ENST00000490999 NECAB2Q7Z6G3 386 aa19.12■□□□□ 0.65
SCAMP3-208ENST00000490999 DZIP1Q86YF9 867 aaKnown RBP19.12■□□□□ 0.65
SCAMP3-208ENST00000490999 COA7Q96BR5 231 aa19.12■□□□□ 0.65
SCAMP3-208ENST00000490999 GDF15Q99988 308 aa19.12■□□□□ 0.65
SCAMP3-208ENST00000490999 PHIPQ8WWQ0 1821 aa19.11■□□□□ 0.65
SCAMP3-208ENST00000490999 DEFB123Q8N688 67 aa19.11■□□□□ 0.65
SCAMP3-208ENST00000490999 GNL3LQ9NVN8 582 aaKnown RBP19.11■□□□□ 0.65
SCAMP3-208ENST00000490999 VCANP13611 3396 aa19.1■□□□□ 0.65
SCAMP3-208ENST00000490999 PTPRCP08575 1304 aa19.1■□□□□ 0.65
SCAMP3-208ENST00000490999 HMGCRP04035 888 aa19.1■□□□□ 0.65
SCAMP3-208ENST00000490999 BTDP43251 543 aa19.1■□□□□ 0.65
SCAMP3-208ENST00000490999 FAM110CQ1W6H9 321 aa19.1■□□□□ 0.65
SCAMP3-208ENST00000490999 DENND2AQ9ULE3 1009 aa19.1■□□□□ 0.65
SCAMP3-208ENST00000490999 DDX60LQ5H9U9 1706 aaKnown RBP19.09■□□□□ 0.65
SCAMP3-208ENST00000490999 CTNND1O60716 968 aaKnown RBP19.09■□□□□ 0.65
SCAMP3-208ENST00000490999 MAGEA10P43363 369 aaPredicted RBP19.09■□□□□ 0.65
SCAMP3-208ENST00000490999 RASGRF1Q13972 1273 aa19.09■□□□□ 0.65
SCAMP3-208ENST00000490999 ABCF2Q9UG63 623 aa19.09■□□□□ 0.65
SCAMP3-208ENST00000490999 PA2G4Q9UQ80 394 aaKnown RBP19.09■□□□□ 0.65
SCAMP3-208ENST00000490999 MNX1P50219 401 aaPredicted RBP19.08■□□□□ 0.64
SCAMP3-208ENST00000490999 SSH1Q8WYL5 1049 aa19.08■□□□□ 0.64
SCAMP3-208ENST00000490999 CEP126Q9P2H0 1117 aa19.08■□□□□ 0.64
SCAMP3-208ENST00000490999 PNMA3Q9UL41 463 aa19.08■□□□□ 0.64
SCAMP3-208ENST00000490999 LOC285556D6RIA3 1793 aa19.08■□□□□ 0.64
SCAMP3-208ENST00000490999 PEX10O60683 326 aa19.07■□□□□ 0.64
SCAMP3-208ENST00000490999 HMGCS2P54868 508 aa19.07■□□□□ 0.64
SCAMP3-208ENST00000490999 MAP3K10Q02779 954 aa19.07■□□□□ 0.64
SCAMP3-208ENST00000490999 CCDC102BQ68D86 513 aa19.07■□□□□ 0.64
SCAMP3-208ENST00000490999 FAM9BQ8IZU0 186 aa19.07■□□□□ 0.64
SCAMP3-208ENST00000490999 LAMA2P24043 3122 aaKnown RBP19.07■□□□□ 0.64
SCAMP3-208ENST00000490999 MROH7-TTC4A0A0A0MT08 1334 aa19.06■□□□□ 0.64
SCAMP3-208ENST00000490999 MYH2Q9UKX2 1941 aa19.06■□□□□ 0.64
SCAMP3-208ENST00000490999 SEMA3EO15041 775 aa19.06■□□□□ 0.64
SCAMP3-208ENST00000490999 CIAO1O76071 339 aa19.06■□□□□ 0.64
SCAMP3-208ENST00000490999 BMP8BP34820 402 aa19.06■□□□□ 0.64
SCAMP3-208ENST00000490999 SPP2Q13103 211 aa19.06■□□□□ 0.64
SCAMP3-208ENST00000490999 TRIB2Q92519 343 aa19.06■□□□□ 0.64
SCAMP3-208ENST00000490999 NBPF3Q9H094 633 aa19.06■□□□□ 0.64
SCAMP3-208ENST00000490999 C11orf49Q9H6J7 331 aa19.06■□□□□ 0.64
SCAMP3-208ENST00000490999 RRP1BQ14684 758 aaKnown RBP19.05■□□□□ 0.64
SCAMP3-208ENST00000490999 ZGPATQ8N5A5 531 aaKnown RBP19.05■□□□□ 0.64
SCAMP3-208ENST00000490999 ANKLE1Q8NAG6 615 aa19.05■□□□□ 0.64
SCAMP3-208ENST00000490999 PROCA1Q8NCQ7 364 aaPredicted RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms