RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 TGFBRAP1Q8WUH2 860 aa13.06□□□□□ -0.32
VARS2-210ENST00000490699 DCPSQ96C86 337 aaKnown RBP13.06□□□□□ -0.32
VARS2-210ENST00000490699 PRMT6Q96LA8 375 aaPredicted RBP13.06□□□□□ -0.32
VARS2-210ENST00000490699 TRIM34Q9BYJ4 488 aa13.06□□□□□ -0.32
VARS2-210ENST00000490699 TDRD3Q9H7E2 651 aaKnown RBP13.06□□□□□ -0.32
VARS2-210ENST00000490699 ARPP21Q9UBL0 812 aaPredicted RBP13.06□□□□□ -0.32
VARS2-210ENST00000490699 ADAMTSL1Q8N6G6 1762 aa13.05□□□□□ -0.32
VARS2-210ENST00000490699 CLRN2A0PK11 232 aa13.05□□□□□ -0.32
VARS2-210ENST00000490699 CHGBP05060 677 aa13.05□□□□□ -0.32
VARS2-210ENST00000490699 POLR3DP05423 398 aaPredicted RBP13.05□□□□□ -0.32
VARS2-210ENST00000490699 HSPD1P10809 573 aaKnown RBP13.05□□□□□ -0.32
VARS2-210ENST00000490699 ZKSCAN1P17029 563 aaPredicted RBP13.05□□□□□ -0.32
VARS2-210ENST00000490699 IMMTQ16891 758 aaKnown RBP13.05□□□□□ -0.32
VARS2-210ENST00000490699 EAPPQ56P03 285 aaPredicted RBP13.05□□□□□ -0.32
VARS2-210ENST00000490699 FKBP1CQ5VVH2 108 aa13.05□□□□□ -0.32
VARS2-210ENST00000490699 ZSCAN29Q8IWY8 852 aaPredicted RBP13.05□□□□□ -0.32
VARS2-210ENST00000490699 HOOK2Q96ED9 719 aa13.05□□□□□ -0.32
VARS2-210ENST00000490699 ZNF70Q9UC06 446 aaPredicted RBP13.05□□□□□ -0.32
VARS2-210ENST00000490699 ZMYM6O95789 1325 aa13.05□□□□□ -0.32
VARS2-210ENST00000490699 NAV1Q8NEY1 1877 aa13.04□□□□□ -0.32
VARS2-210ENST00000490699 ENTPD3O75355 529 aa13.04□□□□□ -0.32
VARS2-210ENST00000490699 NBPF9Q3BBW0 867 aa13.04□□□□□ -0.32
VARS2-210ENST00000490699 TTC6Q86TZ1 520 aa13.04□□□□□ -0.32
VARS2-210ENST00000490699 MAPKAPK5Q8IW41 473 aa13.04□□□□□ -0.32
VARS2-210ENST00000490699 SULF1Q8IWU6 871 aa13.04□□□□□ -0.32
VARS2-210ENST00000490699 ZNF526Q8TF50 670 aaPredicted RBP13.04□□□□□ -0.32
VARS2-210ENST00000490699 ZC3H15Q8WU90 426 aaKnown RBP13.04□□□□□ -0.32
VARS2-210ENST00000490699 SDR42E1Q8WUS8 393 aa13.04□□□□□ -0.32
VARS2-210ENST00000490699 IDI2Q9BXS1 227 aa13.04□□□□□ -0.32
VARS2-210ENST00000490699 DHX36Q9H2U1 1008 aaKnown RBP13.04□□□□□ -0.32
VARS2-210ENST00000490699 TAF1DQ9H5J8 278 aaPredicted RBP13.04□□□□□ -0.32
VARS2-210ENST00000490699 ZNF287Q9HBT7 754 aa13.04□□□□□ -0.32
VARS2-210ENST00000490699 MCM9Q9NXL9 1143 aa13.04□□□□□ -0.32
VARS2-210ENST00000490699 PITPNM2Q9BZ72 1349 aa13.04□□□□□ -0.32
VARS2-210ENST00000490699 SHTN1A0MZ66 631 aa13.03□□□□□ -0.32
VARS2-210ENST00000490699 TCP10L2B9ZVM9 353 aa13.03□□□□□ -0.32
VARS2-210ENST00000490699 ZNF213O14771 459 aa13.03□□□□□ -0.32
VARS2-210ENST00000490699 RHBDL3P58872 404 aa13.03□□□□□ -0.32
VARS2-210ENST00000490699 ALX1Q15699 326 aa13.03□□□□□ -0.32
VARS2-210ENST00000490699 ANGEL2Q5VTE6 544 aaKnown RBP13.03□□□□□ -0.32
VARS2-210ENST00000490699 FAM83AQ86UY5 434 aa13.03□□□□□ -0.32
VARS2-210ENST00000490699 IFNL3Q8IZI9 196 aa13.03□□□□□ -0.32
VARS2-210ENST00000490699 TRPM4Q8TD43 1214 aa13.03□□□□□ -0.32
VARS2-210ENST00000490699 BACH2Q9BYV9 841 aa13.03□□□□□ -0.32
VARS2-210ENST00000490699 GPBP1L1Q9HC44 474 aaPredicted RBP13.03□□□□□ -0.32
VARS2-210ENST00000490699 GGA3Q9NZ52 723 aa13.03□□□□□ -0.32
VARS2-210ENST00000490699 PPP2R3BQ9Y5P8 575 aa13.03□□□□□ -0.32
VARS2-210ENST00000490699 FLT1P17948 1338 aa13.03□□□□□ -0.32
VARS2-210ENST00000490699 FOCADQ5VW36 1801 aa13.02□□□□□ -0.32
VARS2-210ENST00000490699 GSG1L2A8MUP6 293 aa13.02□□□□□ -0.33
VARS2-210ENST00000490699 MINDY4BA8MYZ0 360 aa13.02□□□□□ -0.33
VARS2-210ENST00000490699 PRKAB2O43741 272 aa13.02□□□□□ -0.33
VARS2-210ENST00000490699 TCP10Q12799 353 aa13.02□□□□□ -0.33
VARS2-210ENST00000490699 CRACR2BQ8N4Y2 399 aaPredicted RBP13.02□□□□□ -0.33
VARS2-210ENST00000490699 MAP4K1Q92918 833 aa13.02□□□□□ -0.33
VARS2-210ENST00000490699 ZBED3Q96IU2 234 aaPredicted RBP13.02□□□□□ -0.33
VARS2-210ENST00000490699 LSG1Q9H089 658 aaKnown RBP13.02□□□□□ -0.33
VARS2-210ENST00000490699 OSBPL5Q9H0X9 879 aaPredicted RBP13.02□□□□□ -0.33
VARS2-210ENST00000490699 RNF41Q9H4P4 317 aaPredicted RBP13.02□□□□□ -0.33
VARS2-210ENST00000490699 RRAGCQ9HB90 399 aa13.02□□□□□ -0.33
VARS2-210ENST00000490699 DCP1AQ9NPI6 582 aaPredicted RBP13.02□□□□□ -0.33
VARS2-210ENST00000490699 TAOK2Q9UL54 1235 aa13.02□□□□□ -0.33
VARS2-210ENST00000490699 RBM8AQ9Y5S9 174 aaKnown RBP13.02□□□□□ -0.33
VARS2-210ENST00000490699 WDHD1O75717 1129 aaPredicted RBP13.01□□□□□ -0.33
VARS2-210ENST00000490699 PCP11498 1178 aaKnown RBP13.01□□□□□ -0.33
VARS2-210ENST00000490699 NF2P35240 595 aa13.01□□□□□ -0.33
VARS2-210ENST00000490699 CACNB3P54284 484 aa13.01□□□□□ -0.33
VARS2-210ENST00000490699 PDE4BQ07343 736 aa13.01□□□□□ -0.33
VARS2-210ENST00000490699 TRDNQ13061 729 aa13.01□□□□□ -0.33
VARS2-210ENST00000490699 KRT32Q14532 448 aa13.01□□□□□ -0.33
VARS2-210ENST00000490699 VPS53Q5VIR6 699 aa13.01□□□□□ -0.33
VARS2-210ENST00000490699 FAM151AQ8WW52 585 aa13.01□□□□□ -0.33
VARS2-210ENST00000490699 SAP30BPQ9UHR5 308 aaKnown RBP13.01□□□□□ -0.33
VARS2-210ENST00000490699 SSUH2Q9Y2M2 353 aa13.01□□□□□ -0.33
VARS2-210ENST00000490699 PCDHAC2Q9Y5I4 1007 aa13.01□□□□□ -0.33
VARS2-210ENST00000490699 COL2A1P02458 1487 aaPredicted RBP13.01□□□□□ -0.33
VARS2-210ENST00000490699 MYH1P12882 1939 aa13□□□□□ -0.33
VARS2-210ENST00000490699 CDK5RAP2Q96SN8 1893 aa13□□□□□ -0.33
VARS2-210ENST00000490699 USP17L12C9JPN9 530 aa13□□□□□ -0.33
VARS2-210ENST00000490699 USP17L21D6R901 530 aa13□□□□□ -0.33
VARS2-210ENST00000490699 FGAP02671 866 aa13□□□□□ -0.33
VARS2-210ENST00000490699 PTH1RQ03431 593 aa13□□□□□ -0.33
VARS2-210ENST00000490699 SBK1Q52WX2 424 aa13□□□□□ -0.33
VARS2-210ENST00000490699 RALYLQ86SE5 291 aaKnown RBP13□□□□□ -0.33
VARS2-210ENST00000490699 LDHDQ86WU2 507 aa13□□□□□ -0.33
VARS2-210ENST00000490699 CSRNP1Q96S65 589 aa13□□□□□ -0.33
VARS2-210ENST00000490699 TOMM22Q9NS69 142 aa13□□□□□ -0.33
VARS2-210ENST00000490699 LAMB1P07942 1786 aa12.99□□□□□ -0.33
VARS2-210ENST00000490699 EGFRP00533 1210 aa12.99□□□□□ -0.33
VARS2-210ENST00000490699 CD44P16070 742 aaKnown RBP12.99□□□□□ -0.33
VARS2-210ENST00000490699 YY1P25490 414 aa12.99□□□□□ -0.33
VARS2-210ENST00000490699 NT5C2P49902 561 aa12.99□□□□□ -0.33
VARS2-210ENST00000490699 PPARAQ07869 468 aa12.99□□□□□ -0.33
VARS2-210ENST00000490699 NFIAQ12857 509 aa12.99□□□□□ -0.33
VARS2-210ENST00000490699 RASA3Q14644 834 aa12.99□□□□□ -0.33
VARS2-210ENST00000490699 SUPT20HL1Q3ZLR7 823 aa12.99□□□□□ -0.33
VARS2-210ENST00000490699 DCAF15Q66K64 600 aa12.99□□□□□ -0.33
VARS2-210ENST00000490699 KRT26Q7Z3Y9 468 aa12.99□□□□□ -0.33
VARS2-210ENST00000490699 USP26Q9BXU7 913 aa12.99□□□□□ -0.33
VARS2-210ENST00000490699 C22orf23Q9BZE7 217 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms