RNA–Protein interactions for RNA: ENST00000490104.5

TSN-208, Transcript of translin, humanhuman

TSL 2

Gene TSN, Length 2,717 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSN-208ENST00000490104 CLRN2A0PK11 232 aa16.51■□□□□ 0.23
TSN-208ENST00000490104 YBX3P16989 372 aaKnown RBP eCLIP16.51■□□□□ 0.231e-6■□□□□ 10.5
TSN-208ENST00000490104 GNAT2P19087 354 aa16.51■□□□□ 0.23
TSN-208ENST00000490104 PLCD1P51178 756 aa16.51■□□□□ 0.23
TSN-208ENST00000490104 CCDC83Q8IWF9 413 aa16.51■□□□□ 0.23
TSN-208ENST00000490104 TEKT1Q969V4 418 aa16.51■□□□□ 0.23
TSN-208ENST00000490104 DDX4Q9NQI0 724 aaKnown RBP16.51■□□□□ 0.23
TSN-208ENST00000490104 USP40Q9NVE5 1235 aa16.51■□□□□ 0.23
TSN-208ENST00000490104 RHBDL3P58872 404 aa16.5■□□□□ 0.23
TSN-208ENST00000490104 ZNRF3Q9ULT6 936 aa16.5■□□□□ 0.23
TSN-208ENST00000490104 PRC1O43663 620 aa16.5■□□□□ 0.23
TSN-208ENST00000490104 LDHCP07864 332 aa16.5■□□□□ 0.23
TSN-208ENST00000490104 ANTXR2P58335 489 aa16.5■□□□□ 0.23
TSN-208ENST00000490104 ME3Q16798 604 aa16.5■□□□□ 0.23
TSN-208ENST00000490104 FAM47AQ5JRC9 791 aa16.5■□□□□ 0.23
TSN-208ENST00000490104 ZFPM1Q8IX07 1006 aa16.5■□□□□ 0.23
TSN-208ENST00000490104 TDRD3Q9H7E2 651 aaKnown RBP16.5■□□□□ 0.23
TSN-208ENST00000490104 GPR75-ASB3A0A0A6YYF3 556 aa16.49■□□□□ 0.23
TSN-208ENST00000490104 FAM196BA6NMK8 535 aa16.49■□□□□ 0.23
TSN-208ENST00000490104 RANBP6O60518 1105 aaKnown RBP16.49■□□□□ 0.23
TSN-208ENST00000490104 EGFRP00533 1210 aa16.49■□□□□ 0.23
TSN-208ENST00000490104 CCT2P78371 535 aaKnown RBP16.49■□□□□ 0.23
TSN-208ENST00000490104 TRDNQ13061 729 aa16.49■□□□□ 0.23
TSN-208ENST00000490104 KRT32Q14532 448 aa16.49■□□□□ 0.23
TSN-208ENST00000490104 SOGA3Q5TF21 947 aa16.49■□□□□ 0.23
TSN-208ENST00000490104 APOBEC3HQ6NTF7 200 aaKnown RBP16.49■□□□□ 0.23
TSN-208ENST00000490104 MFSD6Q6ZSS7 791 aa16.49■□□□□ 0.23
TSN-208ENST00000490104 CCDC144CPQ8IYA2 1237 aa16.49■□□□□ 0.23
TSN-208ENST00000490104 TICAM2Q86XR7 235 aa16.49■□□□□ 0.23
TSN-208ENST00000490104 NCOA7Q8NI08 942 aa16.49■□□□□ 0.23
TSN-208ENST00000490104 MYL10Q9BUA6 226 aa16.49■□□□□ 0.23
TSN-208ENST00000490104 LAMA4Q16363 1823 aa16.48■□□□□ 0.23
TSN-208ENST00000490104 NMT2O60551 498 aa16.48■□□□□ 0.23
TSN-208ENST00000490104 POLR3DP05423 398 aaPredicted RBP16.48■□□□□ 0.23
TSN-208ENST00000490104 PKP1Q13835 747 aa16.48■□□□□ 0.23
TSN-208ENST00000490104 CDC42EP5Q6NZY7 148 aa16.48■□□□□ 0.23
TSN-208ENST00000490104 DHX32Q7L7V1 743 aaKnown RBP16.48■□□□□ 0.23
TSN-208ENST00000490104 PRMT6Q96LA8 375 aaPredicted RBP16.48■□□□□ 0.23
TSN-208ENST00000490104 TM6SF1Q9BZW5 370 aa16.48■□□□□ 0.23
TSN-208ENST00000490104 NCOA5Q9HCD5 579 aaKnown RBP16.48■□□□□ 0.23
TSN-208ENST00000490104 FLT1P17948 1338 aa16.48■□□□□ 0.23
TSN-208ENST00000490104 TSGA10IPQ3SY00 556 aa16.48■□□□□ 0.23
TSN-208ENST00000490104 CFAP100Q494V2 611 aa16.48■□□□□ 0.23
TSN-208ENST00000490104 AKNAD1Q5T1N1 836 aa16.48■□□□□ 0.23
TSN-208ENST00000490104 RSBN1LQ6PCB5 846 aaPredicted RBP16.48■□□□□ 0.23
TSN-208ENST00000490104 ZSWIM5Q9P217 1185 aa16.48■□□□□ 0.23
TSN-208ENST00000490104 LIMCH1Q9UPQ0 1083 aa16.47■□□□□ 0.23
TSN-208ENST00000490104 MTMR7Q9Y216 660 aa16.47■□□□□ 0.23
TSN-208ENST00000490104 MB21D2Q8IYB1 491 aaPredicted RBP16.47■□□□□ 0.23
TSN-208ENST00000490104 GAKO14976 1311 aa16.47■□□□□ 0.23
TSN-208ENST00000490104 WDHD1O75717 1129 aaPredicted RBP16.47■□□□□ 0.23
TSN-208ENST00000490104 FOSBP53539 338 aa16.47■□□□□ 0.23
TSN-208ENST00000490104 MAST2Q6P0Q8 1798 aa16.47■□□□□ 0.23
TSN-208ENST00000490104 ZNF541Q9H0D2 1346 aa16.46■□□□□ 0.23
TSN-208ENST00000490104 ST3GAL1Q11201 340 aa16.46■□□□□ 0.23
TSN-208ENST00000490104 ALX1Q15699 326 aa16.46■□□□□ 0.23
TSN-208ENST00000490104 FER1L6Q2WGJ9 1857 aa16.46■□□□□ 0.23
TSN-208ENST00000490104 MCM5P33992 734 aa16.46■□□□□ 0.22
TSN-208ENST00000490104 FOXD4L6Q3SYB3 417 aaPredicted RBP16.46■□□□□ 0.22
TSN-208ENST00000490104 CIAPIN1Q6FI81 312 aa16.46■□□□□ 0.22
TSN-208ENST00000490104 FOXD4L3Q6VB84 417 aaPredicted RBP16.46■□□□□ 0.22
TSN-208ENST00000490104 ZSCAN29Q8IWY8 852 aaPredicted RBP16.46■□□□□ 0.22
TSN-208ENST00000490104 SLF2Q8IX21 1173 aa16.46■□□□□ 0.22
TSN-208ENST00000490104 VEZTQ9HBM0 779 aa16.46■□□□□ 0.22
TSN-208ENST00000490104 ATP8A2Q9NTI2 1148 aa16.46■□□□□ 0.22
TSN-208ENST00000490104 TCP10L2B9ZVM9 353 aa16.45■□□□□ 0.22
TSN-208ENST00000490104 IL17RAQ96F46 866 aa16.45■□□□□ 0.22
TSN-208ENST00000490104 CHAMP1Q96JM3 812 aa16.45■□□□□ 0.22
TSN-208ENST00000490104 MKRN1Q9UHC7 482 aaKnown RBP16.45■□□□□ 0.22
TSN-208ENST00000490104 PPP4CP60510 307 aa16.45■□□□□ 0.22
TSN-208ENST00000490104 EXOSC10Q01780 885 aaKnown RBP16.45■□□□□ 0.22
TSN-208ENST00000490104 SAMD7Q7Z3H4 446 aa16.45■□□□□ 0.22
TSN-208ENST00000490104 CDAN1Q8IWY9 1227 aa16.45■□□□□ 0.22
TSN-208ENST00000490104 OGFOD1Q8N543 542 aa16.45■□□□□ 0.22
TSN-208ENST00000490104 ASTN2O75129 1339 aaPredicted RBP16.44■□□□□ 0.22
TSN-208ENST00000490104 VIL1P09327 827 aaKnown RBP16.44■□□□□ 0.22
TSN-208ENST00000490104 NBR1Q14596 966 aa16.44■□□□□ 0.22
TSN-208ENST00000490104 NBPF9Q3BBW0 867 aa16.44■□□□□ 0.22
TSN-208ENST00000490104 BRPF3Q9ULD4 1205 aa16.44■□□□□ 0.22
TSN-208ENST00000490104 TBC1D10BQ4KMP7 808 aaPredicted RBP16.44■□□□□ 0.22
TSN-208ENST00000490104 KLF18A0A0U1RQI7 1052 aa16.43■□□□□ 0.22
TSN-208ENST00000490104 IFIT3O14879 490 aaKnown RBP16.43■□□□□ 0.22
TSN-208ENST00000490104 GPR162Q16538 588 aa16.43■□□□□ 0.22
TSN-208ENST00000490104 TMEM67Q5HYA8 995 aa16.43■□□□□ 0.22
TSN-208ENST00000490104 NFXL1Q6ZNB6 911 aa16.43■□□□□ 0.22
TSN-208ENST00000490104 MICU3Q86XE3 530 aa16.43■□□□□ 0.22
TSN-208ENST00000490104 DDX11Q96FC9 970 aa16.43■□□□□ 0.22
TSN-208ENST00000490104 GMPSP49915 693 aaPredicted RBP16.43■□□□□ 0.22
TSN-208ENST00000490104 SHROOM1Q2M3G4 852 aaPredicted RBP16.43■□□□□ 0.22
TSN-208ENST00000490104 C12orf60Q5U649 245 aa16.43■□□□□ 0.22
TSN-208ENST00000490104 CLEC10AQ8IUN9 316 aa16.43■□□□□ 0.22
TSN-208ENST00000490104 STAG1Q8WVM7 1258 aa16.43■□□□□ 0.22
TSN-208ENST00000490104 FAM163AQ96GL9 167 aaPredicted RBP16.43■□□□□ 0.22
TSN-208ENST00000490104 ZDHHC15Q96MV8 337 aa16.43■□□□□ 0.22
TSN-208ENST00000490104 MKNK2Q9HBH9 465 aa16.43■□□□□ 0.22
TSN-208ENST00000490104 RNF181Q9P0P0 153 aa16.43■□□□□ 0.22
TSN-208ENST00000490104 ARPP21Q9UBL0 812 aaPredicted RBP16.43■□□□□ 0.22
TSN-208ENST00000490104 JAK2O60674 1132 aa16.42■□□□□ 0.22
TSN-208ENST00000490104 GRIPAP1Q4V328 841 aa16.42■□□□□ 0.22
TSN-208ENST00000490104 HHIPL2Q6UWX4 724 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms