RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 ARPP21Q9UBL0 812 aaPredicted RBP16.8■□□□□ 0.28
VPS26A-205ENST00000489656 SIPA1L1O43166 1804 aa16.8■□□□□ 0.28
VPS26A-205ENST00000489656 WDR19Q8NEZ3 1342 aa16.79■□□□□ 0.28
VPS26A-205ENST00000489656 FZD9O00144 591 aa16.79■□□□□ 0.28
VPS26A-205ENST00000489656 RAD17O75943 681 aa16.79■□□□□ 0.28
VPS26A-205ENST00000489656 PCP11498 1178 aaKnown RBP16.79■□□□□ 0.28
VPS26A-205ENST00000489656 CIAPIN1Q6FI81 312 aa16.79■□□□□ 0.28
VPS26A-205ENST00000489656 APOBEC3HQ6NTF7 200 aaKnown RBP16.79■□□□□ 0.28
VPS26A-205ENST00000489656 TBC1D10CQ8IV04 446 aa16.79■□□□□ 0.28
VPS26A-205ENST00000489656 TEX11Q8IYF3 940 aa16.79■□□□□ 0.28
VPS26A-205ENST00000489656 STAG1Q8WVM7 1258 aa16.79■□□□□ 0.28
VPS26A-205ENST00000489656 PDRG1Q9NUG6 133 aa16.79■□□□□ 0.28
VPS26A-205ENST00000489656 DAXXQ9UER7 740 aaPredicted RBP16.79■□□□□ 0.28
VPS26A-205ENST00000489656 ROBO3Q96MS0 1386 aa16.78■□□□□ 0.28
VPS26A-205ENST00000489656 SOCS7O14512 581 aa16.78■□□□□ 0.28
VPS26A-205ENST00000489656 USP5P45974 858 aa16.78■□□□□ 0.28
VPS26A-205ENST00000489656 SCNN1DP51172 638 aa16.78■□□□□ 0.28
VPS26A-205ENST00000489656 EXOSC10Q01780 885 aaKnown RBP16.78■□□□□ 0.28
VPS26A-205ENST00000489656 PPARAQ07869 468 aa16.78■□□□□ 0.28
VPS26A-205ENST00000489656 TNIP1Q15025 636 aa16.78■□□□□ 0.28
VPS26A-205ENST00000489656 CTR9Q6PD62 1173 aa16.78■□□□□ 0.28
VPS26A-205ENST00000489656 DHX32Q7L7V1 743 aaKnown RBP16.78■□□□□ 0.28
VPS26A-205ENST00000489656 MB21D2Q8IYB1 491 aaPredicted RBP16.78■□□□□ 0.28
VPS26A-205ENST00000489656 FBXL16Q8N461 479 aa16.78■□□□□ 0.28
VPS26A-205ENST00000489656 NCOA7Q8NI08 942 aa16.78■□□□□ 0.28
VPS26A-205ENST00000489656 FGRP09769 529 aa16.77■□□□□ 0.28
VPS26A-205ENST00000489656 CPA1P15085 419 aa16.77■□□□□ 0.28
VPS26A-205ENST00000489656 LMNB1P20700 586 aa16.77■□□□□ 0.28
VPS26A-205ENST00000489656 RPS12P25398 132 aaKnown RBP16.77■□□□□ 0.28
VPS26A-205ENST00000489656 NT5C2P49902 561 aa16.77■□□□□ 0.28
VPS26A-205ENST00000489656 AK2P54819 239 aa16.77■□□□□ 0.28
VPS26A-205ENST00000489656 ANKRD1Q15327 319 aa16.77■□□□□ 0.28
VPS26A-205ENST00000489656 AKNAD1Q5T1N1 836 aa16.77■□□□□ 0.28
VPS26A-205ENST00000489656 RNF41Q9H4P4 317 aaPredicted RBP16.77■□□□□ 0.28
VPS26A-205ENST00000489656 CNNM2Q9H8M5 875 aa16.77■□□□□ 0.28
VPS26A-205ENST00000489656 HDAC9Q9UKV0 1011 aa16.77■□□□□ 0.28
VPS26A-205ENST00000489656 FLT1P17948 1338 aa16.76■□□□□ 0.27
VPS26A-205ENST00000489656 USP17L12C9JPN9 530 aa16.76■□□□□ 0.27
VPS26A-205ENST00000489656 USP17L21D6R901 530 aa16.76■□□□□ 0.27
VPS26A-205ENST00000489656 TRDNQ13061 729 aa16.76■□□□□ 0.27
VPS26A-205ENST00000489656 COL9A3Q14050 684 aaPredicted RBP16.76■□□□□ 0.27
VPS26A-205ENST00000489656 CDC42EP5Q6NZY7 148 aa16.76■□□□□ 0.27
VPS26A-205ENST00000489656 ARHGAP27Q6ZUM4 889 aa16.76■□□□□ 0.27
VPS26A-205ENST00000489656 RALYLQ86SE5 291 aaKnown RBP16.76■□□□□ 0.27
VPS26A-205ENST00000489656 MTMR14Q8NCE2 650 aa16.76■□□□□ 0.27
VPS26A-205ENST00000489656 TGFBRAP1Q8WUH2 860 aa16.76■□□□□ 0.27
VPS26A-205ENST00000489656 AGXT2Q9BYV1 514 aa16.76■□□□□ 0.27
VPS26A-205ENST00000489656 KRT23Q9C075 422 aa16.76■□□□□ 0.27
VPS26A-205ENST00000489656 COL2A1P02458 1487 aaPredicted RBP16.75■□□□□ 0.27
VPS26A-205ENST00000489656 MINDY4BA8MYZ0 360 aa16.75■□□□□ 0.27
VPS26A-205ENST00000489656 WDHD1O75717 1129 aaPredicted RBP16.75■□□□□ 0.27
VPS26A-205ENST00000489656 YBX3P16989 372 aaKnown RBP eCLIP16.75■□□□□ 0.27
VPS26A-205ENST00000489656 MCM5P33992 734 aa16.75■□□□□ 0.27
VPS26A-205ENST00000489656 EIF6P56537 245 aaKnown RBP16.75■□□□□ 0.27
VPS26A-205ENST00000489656 CTDSPL2Q05D32 466 aa16.75■□□□□ 0.27
VPS26A-205ENST00000489656 C12orf60Q5U649 245 aa16.75■□□□□ 0.27
VPS26A-205ENST00000489656 MFSD6Q6ZSS7 791 aa16.75■□□□□ 0.27
VPS26A-205ENST00000489656 AMOTL1Q8IY63 956 aa16.75■□□□□ 0.27
VPS26A-205ENST00000489656 USP40Q9NVE5 1235 aa16.75■□□□□ 0.27
VPS26A-205ENST00000489656 MCM9Q9NXL9 1143 aa16.75■□□□□ 0.27
VPS26A-205ENST00000489656 GREB1LQ9C091 1923 aaPredicted RBP16.74■□□□□ 0.27
VPS26A-205ENST00000489656 NEDD4P46934 1319 aa16.74■□□□□ 0.27
VPS26A-205ENST00000489656 SLC3A2P08195 630 aaKnown RBP16.74■□□□□ 0.27
VPS26A-205ENST00000489656 USP17L8P0C7I0 530 aa16.74■□□□□ 0.27
VPS26A-205ENST00000489656 SLC4A3P48751 1232 aa16.74■□□□□ 0.27
VPS26A-205ENST00000489656 TOB2Q14106 344 aaPredicted RBP16.74■□□□□ 0.27
VPS26A-205ENST00000489656 CFAP100Q494V2 611 aa16.74■□□□□ 0.27
VPS26A-205ENST00000489656 MAPKAPK5Q8IW41 473 aa16.74■□□□□ 0.27
VPS26A-205ENST00000489656 OGFOD1Q8N543 542 aa16.74■□□□□ 0.27
VPS26A-205ENST00000489656 DPF2Q92785 391 aa16.74■□□□□ 0.27
VPS26A-205ENST00000489656 ZSCAN31Q96LW9 406 aaPredicted RBP16.74■□□□□ 0.27
VPS26A-205ENST00000489656 MTA3Q9BTC8 594 aa16.74■□□□□ 0.27
VPS26A-205ENST00000489656 IDI2Q9BXS1 227 aa16.74■□□□□ 0.27
VPS26A-205ENST00000489656 LIMCH1Q9UPQ0 1083 aa16.74■□□□□ 0.27
VPS26A-205ENST00000489656 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.74■□□□□ 0.27
VPS26A-205ENST00000489656 TACC3Q9Y6A5 838 aa16.74■□□□□ 0.27
VPS26A-205ENST00000489656 ORC4O43929 436 aa16.73■□□□□ 0.27
VPS26A-205ENST00000489656 CUL4AQ13619 759 aa16.73■□□□□ 0.27
VPS26A-205ENST00000489656 ZBED3Q96IU2 234 aaPredicted RBP16.73■□□□□ 0.27
VPS26A-205ENST00000489656 TMX3Q96JJ7 454 aa16.73■□□□□ 0.27
VPS26A-205ENST00000489656 CYP2D7A0A087X1C5 515 aa16.72■□□□□ 0.27
VPS26A-205ENST00000489656 SPDYE2BA6NHP3 402 aa16.72■□□□□ 0.27
VPS26A-205ENST00000489656 SPDYE6P0CI01 402 aa16.72■□□□□ 0.27
VPS26A-205ENST00000489656 RBM5P52756 815 aaKnown RBP eCLIP16.72■□□□□ 0.27
VPS26A-205ENST00000489656 ANTXR2P58335 489 aa16.72■□□□□ 0.27
VPS26A-205ENST00000489656 ZNF280AP59817 542 aaPredicted RBP16.72■□□□□ 0.27
VPS26A-205ENST00000489656 Q6ZUG5 572 aa16.72■□□□□ 0.27
VPS26A-205ENST00000489656 SH2B1Q9NRF2 756 aaPredicted RBP16.72■□□□□ 0.27
VPS26A-205ENST00000489656 TAOK2Q9UL54 1235 aa16.72■□□□□ 0.27
VPS26A-205ENST00000489656 PCDHAC2Q9Y5I4 1007 aa16.72■□□□□ 0.27
VPS26A-205ENST00000489656 B4E1Z4 1266 aa16.71■□□□□ 0.27
VPS26A-205ENST00000489656 PRC1O43663 620 aa16.71■□□□□ 0.27
VPS26A-205ENST00000489656 CYP2D6P10635 497 aa16.71■□□□□ 0.27
VPS26A-205ENST00000489656 EVCP57679 992 aa16.71■□□□□ 0.27
VPS26A-205ENST00000489656 DLGAP5Q15398 846 aa16.71■□□□□ 0.27
VPS26A-205ENST00000489656 TMEM87BQ96K49 555 aa16.71■□□□□ 0.27
VPS26A-205ENST00000489656 PRMT6Q96LA8 375 aaPredicted RBP16.71■□□□□ 0.27
VPS26A-205ENST00000489656 TCEANC2Q96MN5 208 aa16.71■□□□□ 0.27
VPS26A-205ENST00000489656 OSBPL5Q9H0X9 879 aaPredicted RBP16.71■□□□□ 0.27
VPS26A-205ENST00000489656 DDX4Q9NQI0 724 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms