RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 RAD17O75943 681 aa12.92□□□□□ -0.34
COL21A1-211ENST00000488912 USP5P45974 858 aa12.92□□□□□ -0.34
COL21A1-211ENST00000488912 EVX2Q03828 476 aa12.92□□□□□ -0.34
COL21A1-211ENST00000488912 TRDNQ13061 729 aa12.92□□□□□ -0.34
COL21A1-211ENST00000488912 ANKRD1Q15327 319 aa12.92□□□□□ -0.34
COL21A1-211ENST00000488912 AKNAD1Q5T1N1 836 aa12.92□□□□□ -0.34
COL21A1-211ENST00000488912 NIM1KQ8IY84 436 aa12.92□□□□□ -0.34
COL21A1-211ENST00000488912 STK11IPQ8N1F8 1099 aa12.92□□□□□ -0.34
COL21A1-211ENST00000488912 TGFBRAP1Q8WUH2 860 aa12.92□□□□□ -0.34
COL21A1-211ENST00000488912 STAG1Q8WVM7 1258 aa12.92□□□□□ -0.34
COL21A1-211ENST00000488912 TEKT1Q969V4 418 aa12.92□□□□□ -0.34
COL21A1-211ENST00000488912 ANAPC4Q9UJX5 808 aa12.92□□□□□ -0.34
COL21A1-211ENST00000488912 B4E1Z4 1266 aa12.91□□□□□ -0.34
COL21A1-211ENST00000488912 PLCG2P16885 1265 aa12.91□□□□□ -0.34
COL21A1-211ENST00000488912 ANTXR2P58335 489 aa12.91□□□□□ -0.34
COL21A1-211ENST00000488912 CUL4AQ13619 759 aa12.91□□□□□ -0.34
COL21A1-211ENST00000488912 HHIPL2Q6UWX4 724 aa12.91□□□□□ -0.34
COL21A1-211ENST00000488912 TEX11Q8IYF3 940 aa12.91□□□□□ -0.34
COL21A1-211ENST00000488912 MCM9Q9NXL9 1143 aa12.91□□□□□ -0.34
COL21A1-211ENST00000488912 ZNRF3Q9ULT6 936 aa12.91□□□□□ -0.34
COL21A1-211ENST00000488912 PSMD14O00487 310 aa12.91□□□□□ -0.34
COL21A1-211ENST00000488912 PRC1O43663 620 aa12.91□□□□□ -0.34
COL21A1-211ENST00000488912 MCM5P33992 734 aa12.91□□□□□ -0.34
COL21A1-211ENST00000488912 DDIT3P35638 169 aa12.91□□□□□ -0.34
COL21A1-211ENST00000488912 CRKP46108 304 aa12.91□□□□□ -0.34
COL21A1-211ENST00000488912 FGD1P98174 961 aa12.91□□□□□ -0.34
COL21A1-211ENST00000488912 RASSF7Q02833 373 aa12.91□□□□□ -0.34
COL21A1-211ENST00000488912 ME3Q16798 604 aa12.91□□□□□ -0.34
COL21A1-211ENST00000488912 MFSD6Q6ZSS7 791 aa12.91□□□□□ -0.34
COL21A1-211ENST00000488912 BRF1Q92994 677 aa12.91□□□□□ -0.34
COL21A1-211ENST00000488912 ARPP21Q9UBL0 812 aaPredicted RBP12.91□□□□□ -0.34
COL21A1-211ENST00000488912 USP17L8P0C7I0 530 aa12.9□□□□□ -0.34
COL21A1-211ENST00000488912 CYP2D6P10635 497 aa12.9□□□□□ -0.34
COL21A1-211ENST00000488912 SLC4A8Q2Y0W8 1093 aa12.9□□□□□ -0.34
COL21A1-211ENST00000488912 CYB5R4Q7L1T6 521 aa12.9□□□□□ -0.34
COL21A1-211ENST00000488912 MAPKAPK5Q8IW41 473 aa12.9□□□□□ -0.34
COL21A1-211ENST00000488912 AGXT2Q9BYV1 514 aa12.9□□□□□ -0.34
COL21A1-211ENST00000488912 PCDHAC2Q9Y5I4 1007 aa12.9□□□□□ -0.34
COL21A1-211ENST00000488912 LTBP3Q9NS15 1303 aa12.9□□□□□ -0.34
COL21A1-211ENST00000488912 SBK1Q52WX2 424 aa12.9□□□□□ -0.34
COL21A1-211ENST00000488912 APOBEC3HQ6NTF7 200 aaKnown RBP12.9□□□□□ -0.34
COL21A1-211ENST00000488912 RSBN1LQ6PCB5 846 aaPredicted RBP12.9□□□□□ -0.34
COL21A1-211ENST00000488912 CNNM2Q9H8M5 875 aa12.9□□□□□ -0.34
COL21A1-211ENST00000488912 GPHNQ9NQX3 736 aaPredicted RBP12.9□□□□□ -0.34
COL21A1-211ENST00000488912 FLT1P17948 1338 aa12.9□□□□□ -0.34
COL21A1-211ENST00000488912 KDM4AO75164 1064 aa12.89□□□□□ -0.35
COL21A1-211ENST00000488912 VIL1P09327 827 aaKnown RBP12.89□□□□□ -0.35
COL21A1-211ENST00000488912 PRELPP51888 382 aa12.89□□□□□ -0.35
COL21A1-211ENST00000488912 RRP12Q5JTH9 1297 aaKnown RBP12.89□□□□□ -0.35
COL21A1-211ENST00000488912 ZSCAN31Q96LW9 406 aaPredicted RBP12.89□□□□□ -0.35
COL21A1-211ENST00000488912 ZDHHC15Q96MV8 337 aa12.89□□□□□ -0.35
COL21A1-211ENST00000488912 RNF41Q9H4P4 317 aaPredicted RBP12.89□□□□□ -0.35
COL21A1-211ENST00000488912 SH2B1Q9NRF2 756 aaPredicted RBP12.89□□□□□ -0.35
COL21A1-211ENST00000488912 TOMM22Q9NS69 142 aa12.89□□□□□ -0.35
COL21A1-211ENST00000488912 WDR19Q8NEZ3 1342 aa12.89□□□□□ -0.35
COL21A1-211ENST00000488912 HDLBPQ00341 1268 aaKnown RBP12.89□□□□□ -0.35
COL21A1-211ENST00000488912 ST3GAL1Q11201 340 aa12.89□□□□□ -0.35
COL21A1-211ENST00000488912 JDP2Q8WYK2 163 aa12.89□□□□□ -0.35
COL21A1-211ENST00000488912 MRIQ9BWK5 157 aa12.89□□□□□ -0.35
COL21A1-211ENST00000488912 KRT23Q9C075 422 aa12.89□□□□□ -0.35
COL21A1-211ENST00000488912 SAP30BPQ9UHR5 308 aaKnown RBP12.89□□□□□ -0.35
COL21A1-211ENST00000488912 SERPINA10Q9UK55 444 aa12.89□□□□□ -0.35
COL21A1-211ENST00000488912 MYO3BQ8WXR4 1341 aa12.89□□□□□ -0.35
COL21A1-211ENST00000488912 RBM5P52756 815 aaKnown RBP eCLIP12.88□□□□□ -0.35
COL21A1-211ENST00000488912 CXCL9Q07325 125 aa12.88□□□□□ -0.35
COL21A1-211ENST00000488912 APOBRQ0VD83 1088 aa12.88□□□□□ -0.35
COL21A1-211ENST00000488912 C12orf60Q5U649 245 aa12.88□□□□□ -0.35
COL21A1-211ENST00000488912 CDC42EP5Q6NZY7 148 aa12.88□□□□□ -0.35
COL21A1-211ENST00000488912 CCDC83Q8IWF9 413 aa12.88□□□□□ -0.35
COL21A1-211ENST00000488912 FBXL16Q8N461 479 aa12.88□□□□□ -0.35
COL21A1-211ENST00000488912 NECAB1Q8N987 351 aa12.88□□□□□ -0.35
COL21A1-211ENST00000488912 INTS4Q96HW7 963 aaKnown RBP12.88□□□□□ -0.35
COL21A1-211ENST00000488912 GMLQ99445 158 aa12.88□□□□□ -0.35
COL21A1-211ENST00000488912 USP40Q9NVE5 1235 aa12.88□□□□□ -0.35
COL21A1-211ENST00000488912 ZSWIM5Q9P217 1185 aa12.88□□□□□ -0.35
COL21A1-211ENST00000488912 ZBTB12Q9Y330 459 aaPredicted RBP12.88□□□□□ -0.35
COL21A1-211ENST00000488912 PRDM1O75626 825 aa12.88□□□□□ -0.35
COL21A1-211ENST00000488912 WDHD1O75717 1129 aaPredicted RBP12.88□□□□□ -0.35
COL21A1-211ENST00000488912 STK3Q13188 491 aa12.88□□□□□ -0.35
COL21A1-211ENST00000488912 SYT17Q9BSW7 474 aa12.88□□□□□ -0.35
COL21A1-211ENST00000488912 SBF1O95248 1867 aa12.87□□□□□ -0.35
COL21A1-211ENST00000488912 DICER1Q9UPY3 1922 aaKnown RBP12.87□□□□□ -0.35
COL21A1-211ENST00000488912 FGRP09769 529 aa12.87□□□□□ -0.35
COL21A1-211ENST00000488912 PICALMQ13492 652 aa12.87□□□□□ -0.35
COL21A1-211ENST00000488912 DDX4Q9NQI0 724 aaKnown RBP12.87□□□□□ -0.35
COL21A1-211ENST00000488912 BRPF3Q9ULD4 1205 aa12.87□□□□□ -0.35
COL21A1-211ENST00000488912 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.87□□□□□ -0.35
COL21A1-211ENST00000488912 ROBO3Q96MS0 1386 aa12.87□□□□□ -0.35
COL21A1-211ENST00000488912 PLCD1P51178 756 aa12.87□□□□□ -0.35
COL21A1-211ENST00000488912 AMOTL1Q8IY63 956 aa12.87□□□□□ -0.35
COL21A1-211ENST00000488912 CHMP5Q9NZZ3 219 aa12.87□□□□□ -0.35
COL21A1-211ENST00000488912 SH2B2O14492 632 aaPredicted RBP12.86□□□□□ -0.35
COL21A1-211ENST00000488912 POLR3DP05423 398 aaPredicted RBP12.86□□□□□ -0.35
COL21A1-211ENST00000488912 SLC3A2P08195 630 aaKnown RBP12.86□□□□□ -0.35
COL21A1-211ENST00000488912 PCP11498 1178 aaKnown RBP12.86□□□□□ -0.35
COL21A1-211ENST00000488912 CFAP100Q494V2 611 aa12.86□□□□□ -0.35
COL21A1-211ENST00000488912 GLIPR1L2Q4G1C9 344 aa12.86□□□□□ -0.35
COL21A1-211ENST00000488912 CIAPIN1Q6FI81 312 aa12.86□□□□□ -0.35
COL21A1-211ENST00000488912 ESR2Q92731 530 aa12.86□□□□□ -0.35
COL21A1-211ENST00000488912 DYNLL2Q96FJ2 89 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms