RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 GADD45BO75293 160 aaPredicted RBP6.04□□□□□ -1.44
CCDC93-209ENST00000488908 PPP1R15AO75807 674 aaPredicted RBP6.04□□□□□ -1.44
CCDC93-209ENST00000488908 ITIH2P19823 946 aa6.04□□□□□ -1.44
CCDC93-209ENST00000488908 ORC1Q13415 861 aa6.04□□□□□ -1.44
CCDC93-209ENST00000488908 KCNMB1Q16558 191 aa6.04□□□□□ -1.44
CCDC93-209ENST00000488908 ASB11Q8WXH4 323 aa6.04□□□□□ -1.44
CCDC93-209ENST00000488908 TOX2Q96NM4 488 aa6.04□□□□□ -1.44
CCDC93-209ENST00000488908 TNKS2Q9H2K2 1166 aa6.04□□□□□ -1.44
CCDC93-209ENST00000488908 EGFL7Q9UHF1 273 aa6.04□□□□□ -1.44
CCDC93-209ENST00000488908 TRAK1Q9UPV9 953 aa6.04□□□□□ -1.44
CCDC93-209ENST00000488908 NDUFB5O43674 189 aa6.03□□□□□ -1.44
CCDC93-209ENST00000488908 ICMTO60725 284 aa6.03□□□□□ -1.44
CCDC93-209ENST00000488908 RAP1GAPP47736 663 aa6.03□□□□□ -1.44
CCDC93-209ENST00000488908 PPP2R3AQ06190 1150 aa6.03□□□□□ -1.44
CCDC93-209ENST00000488908 FAAP100Q0VG06 881 aa6.03□□□□□ -1.44
CCDC93-209ENST00000488908 MLANAQ16655 118 aa6.03□□□□□ -1.44
CCDC93-209ENST00000488908 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.03□□□□□ -1.44
CCDC93-209ENST00000488908 TOP6BLQ8N6T0 577 aa6.03□□□□□ -1.44
CCDC93-209ENST00000488908 PPP1R16BQ96T49 567 aa6.03□□□□□ -1.44
CCDC93-209ENST00000488908 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.03□□□□□ -1.44
CCDC93-209ENST00000488908 ZNF503-AS2A6NEH8 195 aa6.02□□□□□ -1.45
CCDC93-209ENST00000488908 IKZF1Q13422 519 aa6.02□□□□□ -1.45
CCDC93-209ENST00000488908 GLYCTKQ8IVS8 523 aa6.02□□□□□ -1.45
CCDC93-209ENST00000488908 ISL2Q96A47 359 aa6.02□□□□□ -1.45
CCDC93-209ENST00000488908 CCDC74AQ96AQ1 378 aa6.02□□□□□ -1.45
CCDC93-209ENST00000488908 DNAJC25Q9H1X3 360 aa6.02□□□□□ -1.45
CCDC93-209ENST00000488908 PRDM7Q9NQW5 492 aa6.02□□□□□ -1.45
CCDC93-209ENST00000488908 GTF2IRD1Q9UHL9 959 aa6.02□□□□□ -1.45
CCDC93-209ENST00000488908 H3BRB1 525 aa6.01□□□□□ -1.45
CCDC93-209ENST00000488908 NEFMP07197 916 aa6.01□□□□□ -1.45
CCDC93-209ENST00000488908 ZP2Q05996 745 aa6.01□□□□□ -1.45
CCDC93-209ENST00000488908 RNF214Q8ND24 703 aa6.01□□□□□ -1.45
CCDC93-209ENST00000488908 ZSCAN18Q8TBC5 510 aaPredicted RBP6.01□□□□□ -1.45
CCDC93-209ENST00000488908 KCNB2Q92953 911 aa6.01□□□□□ -1.45
CCDC93-209ENST00000488908 FAM129BQ96TA1 746 aa6.01□□□□□ -1.45
CCDC93-209ENST00000488908 TUT1Q9H6E5 874 aaKnown RBP6.01□□□□□ -1.45
CCDC93-209ENST00000488908 TMEM39AQ9NV64 488 aa6.01□□□□□ -1.45
CCDC93-209ENST00000488908 GPN3Q9UHW5 284 aaPredicted RBP6.01□□□□□ -1.45
CCDC93-209ENST00000488908 EIF1AYO14602 144 aaKnown RBP6□□□□□ -1.45
CCDC93-209ENST00000488908 TSPAN15O95858 294 aa6□□□□□ -1.45
CCDC93-209ENST00000488908 ERVK-24P63145 666 aa6□□□□□ -1.45
CCDC93-209ENST00000488908 DTHD1Q6ZMT9 781 aa6□□□□□ -1.45
CCDC93-209ENST00000488908 PDZD3Q86UT5 571 aa6□□□□□ -1.45
CCDC93-209ENST00000488908 HEXIM2Q96MH2 286 aaKnown RBP6□□□□□ -1.45
CCDC93-209ENST00000488908 CITED4Q96RK1 184 aa6□□□□□ -1.45
CCDC93-209ENST00000488908 KRTAP4-11Q9BYQ6 195 aa6□□□□□ -1.45
CCDC93-209ENST00000488908 ARID3CA6NKF2 412 aa5.99□□□□□ -1.45
CCDC93-209ENST00000488908 IGF2BP3O00425 579 aaKnown RBP eCLIP5.99□□□□□ -1.45
CCDC93-209ENST00000488908 AFMP43652 599 aa5.99□□□□□ -1.45
CCDC93-209ENST00000488908 GRM2Q14416 872 aa5.99□□□□□ -1.45
CCDC93-209ENST00000488908 ZC3H12AQ5D1E8 599 aaKnown RBP5.99□□□□□ -1.45
CCDC93-209ENST00000488908 CILP2Q8IUL8 1156 aa5.99□□□□□ -1.45
CCDC93-209ENST00000488908 PPP4R2Q9NY27 417 aa5.99□□□□□ -1.45
CCDC93-209ENST00000488908 CTNND2Q9UQB3 1225 aa5.99□□□□□ -1.45
CCDC93-209ENST00000488908 KRTAP9-7A8MTY7 169 aa5.98□□□□□ -1.45
CCDC93-209ENST00000488908 CFPP27918 469 aa5.98□□□□□ -1.45
CCDC93-209ENST00000488908 ARHGAP4P98171 946 aa5.98□□□□□ -1.45
CCDC93-209ENST00000488908 B4GALNT3Q6L9W6 998 aa5.98□□□□□ -1.45
CCDC93-209ENST00000488908 SULF2Q8IWU5 870 aa5.98□□□□□ -1.45
CCDC93-209ENST00000488908 SPACA3Q8IXA5 215 aa5.98□□□□□ -1.45
CCDC93-209ENST00000488908 LIN37Q96GY3 246 aaPredicted RBP5.98□□□□□ -1.45
CCDC93-209ENST00000488908 CARNS1A5YM72 827 aa5.97□□□□□ -1.45
CCDC93-209ENST00000488908 GLI1P08151 1106 aa5.97□□□□□ -1.45
CCDC93-209ENST00000488908 XRCC5P13010 732 aaKnown RBP5.97□□□□□ -1.45
CCDC93-209ENST00000488908 CLCN7P51798 805 aa5.97□□□□□ -1.45
CCDC93-209ENST00000488908 FCGRTP55899 365 aa5.97□□□□□ -1.45
CCDC93-209ENST00000488908 ECM1Q16610 540 aa5.97□□□□□ -1.45
CCDC93-209ENST00000488908 MPZL3Q6UWV2 235 aa5.97□□□□□ -1.45
CCDC93-209ENST00000488908 SYDE1Q6ZW31 735 aaPredicted RBP5.97□□□□□ -1.45
CCDC93-209ENST00000488908 FAM214BQ7L5A3 538 aa5.97□□□□□ -1.45
CCDC93-209ENST00000488908 ANKLE2Q86XL3 938 aa5.97□□□□□ -1.45
CCDC93-209ENST00000488908 SIAH1Q8IUQ4 282 aa5.97□□□□□ -1.45
CCDC93-209ENST00000488908 LRRC56Q8IYG6 542 aaPredicted RBP5.97□□□□□ -1.45
CCDC93-209ENST00000488908 TMC1Q8TDI8 760 aa5.97□□□□□ -1.45
CCDC93-209ENST00000488908 PRDM10Q9NQV6 1147 aa5.97□□□□□ -1.45
CCDC93-209ENST00000488908 GNAT3A8MTJ3 354 aa5.96□□□□□ -1.46
CCDC93-209ENST00000488908 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.96□□□□□ -1.46
CCDC93-209ENST00000488908 ZNF865P0CJ78 1059 aaPredicted RBP5.96□□□□□ -1.46
CCDC93-209ENST00000488908 ARNTP27540 789 aa5.96□□□□□ -1.46
CCDC93-209ENST00000488908 NKPD1Q17RQ9 610 aa5.96□□□□□ -1.46
CCDC93-209ENST00000488908 MAP1SQ66K74 1059 aaPredicted RBP5.96□□□□□ -1.46
CCDC93-209ENST00000488908 ACSBG1Q96GR2 724 aa5.96□□□□□ -1.46
CCDC93-209ENST00000488908 EMILIN2Q9BXX0 1053 aa5.96□□□□□ -1.46
CCDC93-209ENST00000488908 NIF3L1Q9GZT8 377 aa5.96□□□□□ -1.46
CCDC93-209ENST00000488908 LMCD1Q9NZU5 365 aa5.96□□□□□ -1.46
CCDC93-209ENST00000488908 PITPNM2Q9BZ72 1349 aa5.96□□□□□ -1.46
CCDC93-209ENST00000488908 GPR182O15218 404 aa5.95□□□□□ -1.46
CCDC93-209ENST00000488908 SERPINB4P48594 390 aa5.95□□□□□ -1.46
CCDC93-209ENST00000488908 FYB2Q5VWT5 728 aa5.95□□□□□ -1.46
CCDC93-209ENST00000488908 LILRA6Q6PI73 481 aa5.95□□□□□ -1.46
CCDC93-209ENST00000488908 LCNL1Q6ZST4 164 aa5.95□□□□□ -1.46
CCDC93-209ENST00000488908 C1QL4Q86Z23 238 aa5.95□□□□□ -1.46
CCDC93-209ENST00000488908 CCDC82Q8N4S0 544 aa5.95□□□□□ -1.46
CCDC93-209ENST00000488908 GPBAR1Q8TDU6 330 aa5.95□□□□□ -1.46
CCDC93-209ENST00000488908 EPS8L3Q8TE67 593 aaKnown RBP5.95□□□□□ -1.46
CCDC93-209ENST00000488908 KIRREL1Q96J84 757 aa5.95□□□□□ -1.46
CCDC93-209ENST00000488908 CSRNP1Q96S65 589 aa5.95□□□□□ -1.46
CCDC93-209ENST00000488908 PICK1Q9NRD5 415 aa5.95□□□□□ -1.46
CCDC93-209ENST00000488908 NLRP2Q9NX02 1062 aa5.95□□□□□ -1.46
CCDC93-209ENST00000488908 NME2P22392 152 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms