RNA–Protein interactions for RNA: ENST00000487275.1

ZNF541-204, Transcript of zinc finger protein 541, humanhuman

TSL 3

Gene ZNF541, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-204ENST00000487275 PRC1O43663 620 aa9.48□□□□□ -0.89
ZNF541-204ENST00000487275 POLR3DP05423 398 aaPredicted RBP9.48□□□□□ -0.89
ZNF541-204ENST00000487275 VIL1P09327 827 aaKnown RBP9.48□□□□□ -0.89
ZNF541-204ENST00000487275 USP17L8P0C7I0 530 aa9.48□□□□□ -0.89
ZNF541-204ENST00000487275 PCP11498 1178 aaKnown RBP9.48□□□□□ -0.89
ZNF541-204ENST00000487275 RHBDL3P58872 404 aa9.48□□□□□ -0.89
ZNF541-204ENST00000487275 RASSF7Q02833 373 aa9.48□□□□□ -0.89
ZNF541-204ENST00000487275 CUL4AQ13619 759 aa9.48□□□□□ -0.89
ZNF541-204ENST00000487275 COL9A3Q14050 684 aaPredicted RBP9.48□□□□□ -0.89
ZNF541-204ENST00000487275 TOB2Q14106 344 aaPredicted RBP9.48□□□□□ -0.89
ZNF541-204ENST00000487275 CIAPIN1Q6FI81 312 aa9.48□□□□□ -0.89
ZNF541-204ENST00000487275 CHST3Q7LGC8 479 aa9.48□□□□□ -0.89
ZNF541-204ENST00000487275 STK11IPQ8N1F8 1099 aa9.48□□□□□ -0.89
ZNF541-204ENST00000487275 ZDHHC15Q96MV8 337 aa9.48□□□□□ -0.89
ZNF541-204ENST00000487275 USP40Q9NVE5 1235 aa9.48□□□□□ -0.89
ZNF541-204ENST00000487275 WDR19Q8NEZ3 1342 aa9.48□□□□□ -0.89
ZNF541-204ENST00000487275 MYH2Q9UKX2 1941 aa9.48□□□□□ -0.89
ZNF541-204ENST00000487275 TIAM2Q8IVF5 1701 aa9.48□□□□□ -0.89
ZNF541-204ENST00000487275 LAMA4Q16363 1823 aa9.47□□□□□ -0.89
ZNF541-204ENST00000487275 CYP2D7A0A087X1C5 515 aa9.47□□□□□ -0.89
ZNF541-204ENST00000487275 CYP2D6P10635 497 aa9.47□□□□□ -0.89
ZNF541-204ENST00000487275 PDE4BQ07343 736 aa9.47□□□□□ -0.89
ZNF541-204ENST00000487275 TNIP1Q15025 636 aa9.47□□□□□ -0.89
ZNF541-204ENST00000487275 ESR2Q92731 530 aa9.47□□□□□ -0.89
ZNF541-204ENST00000487275 BRF1Q92994 677 aa9.47□□□□□ -0.89
ZNF541-204ENST00000487275 INTS4Q96HW7 963 aaKnown RBP9.47□□□□□ -0.89
ZNF541-204ENST00000487275 CWC22Q9HCG8 908 aaKnown RBP9.47□□□□□ -0.89
ZNF541-204ENST00000487275 INCENPQ9NQS7 918 aa9.47□□□□□ -0.89
ZNF541-204ENST00000487275 SAP30BPQ9UHR5 308 aaKnown RBP9.47□□□□□ -0.89
ZNF541-204ENST00000487275 SERPINA10Q9UK55 444 aa9.47□□□□□ -0.89
ZNF541-204ENST00000487275 TPCN1Q9ULQ1 816 aa9.47□□□□□ -0.89
ZNF541-204ENST00000487275 NAP1L2Q9ULW6 460 aaPredicted RBP9.47□□□□□ -0.89
ZNF541-204ENST00000487275 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.47□□□□□ -0.89
ZNF541-204ENST00000487275 FLT1P17948 1338 aa9.47□□□□□ -0.89
ZNF541-204ENST00000487275 SCN9AQ15858 1988 aa9.46□□□□□ -0.89
ZNF541-204ENST00000487275 COL4A5P29400 1685 aa9.46□□□□□ -0.89
ZNF541-204ENST00000487275 ERICH2A1L162 156 aa9.46□□□□□ -0.9
ZNF541-204ENST00000487275 KDM4AO75164 1064 aa9.46□□□□□ -0.9
ZNF541-204ENST00000487275 LARGE1O95461 756 aa9.46□□□□□ -0.9
ZNF541-204ENST00000487275 EIF6P56537 245 aaKnown RBP9.46□□□□□ -0.9
ZNF541-204ENST00000487275 ANTXR2P58335 489 aa9.46□□□□□ -0.9
ZNF541-204ENST00000487275 CXCL9Q07325 125 aa9.46□□□□□ -0.9
ZNF541-204ENST00000487275 APOBRQ0VD83 1088 aa9.46□□□□□ -0.9
ZNF541-204ENST00000487275 PICALMQ13492 652 aa9.46□□□□□ -0.9
ZNF541-204ENST00000487275 SART3Q15020 963 aaKnown RBP9.46□□□□□ -0.9
ZNF541-204ENST00000487275 ME3Q16798 604 aa9.46□□□□□ -0.9
ZNF541-204ENST00000487275 SLC4A8Q2Y0W8 1093 aa9.46□□□□□ -0.9
ZNF541-204ENST00000487275 CFAP100Q494V2 611 aa9.46□□□□□ -0.9
ZNF541-204ENST00000487275 C12orf60Q5U649 245 aa9.46□□□□□ -0.9
ZNF541-204ENST00000487275 APOBEC3HQ6NTF7 200 aaKnown RBP9.46□□□□□ -0.9
ZNF541-204ENST00000487275 CDC42EP5Q6NZY7 148 aa9.46□□□□□ -0.9
ZNF541-204ENST00000487275 ARHGAP27Q6ZUM4 889 aa9.46□□□□□ -0.9
ZNF541-204ENST00000487275 CYB5R4Q7L1T6 521 aa9.46□□□□□ -0.9
ZNF541-204ENST00000487275 CCDC83Q8IWF9 413 aa9.46□□□□□ -0.9
ZNF541-204ENST00000487275 FBXL16Q8N461 479 aa9.46□□□□□ -0.9
ZNF541-204ENST00000487275 OGFOD1Q8N543 542 aa9.46□□□□□ -0.9
ZNF541-204ENST00000487275 AGBL3Q8NEM8 1001 aa9.46□□□□□ -0.9
ZNF541-204ENST00000487275 TMEM87BQ96K49 555 aa9.46□□□□□ -0.9
ZNF541-204ENST00000487275 SYT17Q9BSW7 474 aa9.46□□□□□ -0.9
ZNF541-204ENST00000487275 AGXT2Q9BYV1 514 aa9.46□□□□□ -0.9
ZNF541-204ENST00000487275 CHMP5Q9NZZ3 219 aa9.46□□□□□ -0.9
ZNF541-204ENST00000487275 MKRN1Q9UHC7 482 aaKnown RBP9.46□□□□□ -0.9
ZNF541-204ENST00000487275 CIZ1Q9ULV3 898 aaPredicted RBP9.46□□□□□ -0.9
ZNF541-204ENST00000487275 ZBTB12Q9Y330 459 aaPredicted RBP9.46□□□□□ -0.9
ZNF541-204ENST00000487275 FER1L6Q2WGJ9 1857 aa9.46□□□□□ -0.9
ZNF541-204ENST00000487275 SH2B2O14492 632 aaPredicted RBP9.45□□□□□ -0.9
ZNF541-204ENST00000487275 IFIT3O14879 490 aaKnown RBP9.45□□□□□ -0.9
ZNF541-204ENST00000487275 ORC4O43929 436 aa9.45□□□□□ -0.9
ZNF541-204ENST00000487275 RANBP6O60518 1105 aaKnown RBP9.45□□□□□ -0.9
ZNF541-204ENST00000487275 WDHD1O75717 1129 aaPredicted RBP9.45□□□□□ -0.9
ZNF541-204ENST00000487275 NT5C2P49902 561 aa9.45□□□□□ -0.9
ZNF541-204ENST00000487275 STK3Q13188 491 aa9.45□□□□□ -0.9
ZNF541-204ENST00000487275 TMEM67Q5HYA8 995 aa9.45□□□□□ -0.9
ZNF541-204ENST00000487275 NECAB1Q8N987 351 aa9.45□□□□□ -0.9
ZNF541-204ENST00000487275 CHMP4CQ96CF2 233 aa9.45□□□□□ -0.9
ZNF541-204ENST00000487275 UBAC1Q9BSL1 405 aa9.45□□□□□ -0.9
ZNF541-204ENST00000487275 MTA3Q9BTC8 594 aa9.45□□□□□ -0.9
ZNF541-204ENST00000487275 ZNF287Q9HBT7 754 aa9.45□□□□□ -0.9
ZNF541-204ENST00000487275 TMOD2Q9NZR1 351 aa9.45□□□□□ -0.9
ZNF541-204ENST00000487275 ZSWIM5Q9P217 1185 aa9.45□□□□□ -0.9
ZNF541-204ENST00000487275 ANGEL1Q9UNK9 670 aaKnown RBP9.45□□□□□ -0.9
ZNF541-204ENST00000487275 SMC3Q9UQE7 1217 aa9.45□□□□□ -0.9
ZNF541-204ENST00000487275 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.45□□□□□ -0.9
ZNF541-204ENST00000487275 TACC3Q9Y6A5 838 aa9.45□□□□□ -0.9
ZNF541-204ENST00000487275 KLF18A0A0U1RQI7 1052 aa9.44□□□□□ -0.9
ZNF541-204ENST00000487275 SMIM22K7EJ46 135 aa9.44□□□□□ -0.9
ZNF541-204ENST00000487275 PFKFB2O60825 505 aa9.44□□□□□ -0.9
ZNF541-204ENST00000487275 PRDM1O75626 825 aa9.44□□□□□ -0.9
ZNF541-204ENST00000487275 HLA-DOAP06340 250 aa9.44□□□□□ -0.9
ZNF541-204ENST00000487275 FGRP09769 529 aa9.44□□□□□ -0.9
ZNF541-204ENST00000487275 RPS12P25398 132 aaKnown RBP9.44□□□□□ -0.9
ZNF541-204ENST00000487275 WTAPQ15007 396 aa9.44□□□□□ -0.9
ZNF541-204ENST00000487275 DLGAP5Q15398 846 aa9.44□□□□□ -0.9
ZNF541-204ENST00000487275 NFXL1Q6ZNB6 911 aa9.44□□□□□ -0.9
ZNF541-204ENST00000487275 TTC6Q86TZ1 520 aa9.44□□□□□ -0.9
ZNF541-204ENST00000487275 IQCA1Q86XH1 822 aa9.44□□□□□ -0.9
ZNF541-204ENST00000487275 DYNLL2Q96FJ2 89 aa9.44□□□□□ -0.9
ZNF541-204ENST00000487275 ZNF274Q96GC6 653 aaPredicted RBP9.44□□□□□ -0.9
ZNF541-204ENST00000487275 GMLQ99445 158 aa9.44□□□□□ -0.9
ZNF541-204ENST00000487275 OSBPL5Q9H0X9 879 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms