RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 GHRHP01286 108 aa8.68□□□□□ -1.02
RTFDC1-209ENST00000487211 ARAFP10398 606 aa8.68□□□□□ -1.02
RTFDC1-209ENST00000487211 ADH6P28332 368 aa8.68□□□□□ -1.02
RTFDC1-209ENST00000487211 DEFB132Q7Z7B7 95 aa8.68□□□□□ -1.02
RTFDC1-209ENST00000487211 SLC16A10Q8TF71 515 aa8.68□□□□□ -1.02
RTFDC1-209ENST00000487211 CNTNAP3BQ96NU0 1288 aa8.68□□□□□ -1.02
RTFDC1-209ENST00000487211 CNTNAP3Q9BZ76 1288 aa8.68□□□□□ -1.02
RTFDC1-209ENST00000487211 POGKQ9P215 609 aa8.68□□□□□ -1.02
RTFDC1-209ENST00000487211 KLF15Q9UIH9 416 aa8.68□□□□□ -1.02
RTFDC1-209ENST00000487211 XRN1Q8IZH2 1706 aaKnown RBP8.68□□□□□ -1.02
RTFDC1-209ENST00000487211 NEURL1BA8MQ27 555 aa8.67□□□□□ -1.02
RTFDC1-209ENST00000487211 ATF3P18847 181 aa8.67□□□□□ -1.02
RTFDC1-209ENST00000487211 EIF2AK2P19525 551 aaKnown RBP8.67□□□□□ -1.02
RTFDC1-209ENST00000487211 AFF2P51816 1311 aa8.67□□□□□ -1.02
RTFDC1-209ENST00000487211 MSH6P52701 1360 aa8.67□□□□□ -1.02
RTFDC1-209ENST00000487211 PTCH1Q13635 1447 aa8.67□□□□□ -1.02
RTFDC1-209ENST00000487211 RBSNQ9H1K0 784 aa8.67□□□□□ -1.02
RTFDC1-209ENST00000487211 DZANK1Q9NVP4 752 aa8.67□□□□□ -1.02
RTFDC1-209ENST00000487211 VSIG8P0DPA2 414 aa8.66□□□□□ -1.02
RTFDC1-209ENST00000487211 CPB1P15086 417 aa8.66□□□□□ -1.02
RTFDC1-209ENST00000487211 RNFT1Q5M7Z0 435 aa8.66□□□□□ -1.02
RTFDC1-209ENST00000487211 FAM35AQ86V20 835 aa8.66□□□□□ -1.02
RTFDC1-209ENST00000487211 GLIS3Q8NEA6 775 aa8.66□□□□□ -1.02
RTFDC1-209ENST00000487211 TNFRSF25Q93038 417 aa8.66□□□□□ -1.02
RTFDC1-209ENST00000487211 HHIPQ96QV1 700 aa8.66□□□□□ -1.02
RTFDC1-209ENST00000487211 TCF12Q99081 682 aa8.66□□□□□ -1.02
RTFDC1-209ENST00000487211 HIRIP3Q9BW71 556 aaPredicted RBP8.66□□□□□ -1.02
RTFDC1-209ENST00000487211 CARD11Q9BXL7 1154 aa8.66□□□□□ -1.02
RTFDC1-209ENST00000487211 RASSF4Q9H2L5 321 aa8.66□□□□□ -1.02
RTFDC1-209ENST00000487211 SLC6A14Q9UN76 642 aa8.66□□□□□ -1.02
RTFDC1-209ENST00000487211 ROCK2O75116 1388 aaKnown RBP8.65□□□□□ -1.02
RTFDC1-209ENST00000487211 ERBB4Q15303 1308 aa8.65□□□□□ -1.02
RTFDC1-209ENST00000487211 CHD4Q14839 1912 aa8.65□□□□□ -1.02
RTFDC1-209ENST00000487211 GSTT1P30711 240 aa8.65□□□□□ -1.02
RTFDC1-209ENST00000487211 ADH7P40394 386 aa8.65□□□□□ -1.02
RTFDC1-209ENST00000487211 FCGRTP55899 365 aa8.65□□□□□ -1.02
RTFDC1-209ENST00000487211 RBM6P78332 1123 aaKnown RBP8.65□□□□□ -1.02
RTFDC1-209ENST00000487211 ATP11AP98196 1134 aa8.65□□□□□ -1.02
RTFDC1-209ENST00000487211 CCNJLQ8IV13 435 aa8.65□□□□□ -1.02
RTFDC1-209ENST00000487211 PBX4Q9BYU1 374 aa8.65□□□□□ -1.02
RTFDC1-209ENST00000487211 GGA1Q9UJY5 639 aa8.65□□□□□ -1.02
RTFDC1-209ENST00000487211 ADGRL3Q9HAR2 1447 aa8.64□□□□□ -1.03
RTFDC1-209ENST00000487211 GPRASP1Q5JY77 1395 aa8.64□□□□□ -1.03
RTFDC1-209ENST00000487211 SPATA31A6Q5VVP1 1343 aa8.64□□□□□ -1.03
RTFDC1-209ENST00000487211 TMEM238LA0A1B0GVL6 79 aa8.64□□□□□ -1.03
RTFDC1-209ENST00000487211 NFKBIEO00221 500 aa8.64□□□□□ -1.03
RTFDC1-209ENST00000487211 ZNF76P36508 570 aa8.64□□□□□ -1.03
RTFDC1-209ENST00000487211 HDLBPQ00341 1268 aaKnown RBP8.64□□□□□ -1.03
RTFDC1-209ENST00000487211 NFX1Q12986 1120 aaKnown RBP8.64□□□□□ -1.03
RTFDC1-209ENST00000487211 MEI1Q5TIA1 1274 aa8.64□□□□□ -1.03
RTFDC1-209ENST00000487211 C9orf131Q5VYM1 1079 aa8.64□□□□□ -1.03
RTFDC1-209ENST00000487211 CEP135Q66GS9 1140 aa8.64□□□□□ -1.03
RTFDC1-209ENST00000487211 PRPF40BQ6NWY9 871 aaKnown RBP8.64□□□□□ -1.03
RTFDC1-209ENST00000487211 DTHD1Q6ZMT9 781 aa8.64□□□□□ -1.03
RTFDC1-209ENST00000487211 FCHSD1Q86WN1 690 aa8.64□□□□□ -1.03
RTFDC1-209ENST00000487211 MICALL1Q8N3F8 863 aa8.64□□□□□ -1.03
RTFDC1-209ENST00000487211 RNF34Q969K3 372 aa8.64□□□□□ -1.03
RTFDC1-209ENST00000487211 ORAI2Q96SN7 254 aa8.64□□□□□ -1.03
RTFDC1-209ENST00000487211 OXCT2Q9BYC2 517 aaPredicted RBP8.64□□□□□ -1.03
RTFDC1-209ENST00000487211 ABCB6Q9NP58 842 aa8.64□□□□□ -1.03
RTFDC1-209ENST00000487211 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.63□□□□□ -1.03
RTFDC1-209ENST00000487211 ADARB2-AS1A8MUL3 147 aa8.63□□□□□ -1.03
RTFDC1-209ENST00000487211 METTL12A8MUP2 240 aa8.63□□□□□ -1.03
RTFDC1-209ENST00000487211 PDE2AO00408 941 aaPredicted RBP8.63□□□□□ -1.03
RTFDC1-209ENST00000487211 FANCCQ00597 558 aa8.63□□□□□ -1.03
RTFDC1-209ENST00000487211 TAF1CQ15572 869 aaPredicted RBP8.63□□□□□ -1.03
RTFDC1-209ENST00000487211 PERM1Q5SV97 790 aa8.63□□□□□ -1.03
RTFDC1-209ENST00000487211 MEX3CQ5U5Q3 659 aaKnown RBP8.63□□□□□ -1.03
RTFDC1-209ENST00000487211 ELMSAN1Q6PJG2 1045 aa8.63□□□□□ -1.03
RTFDC1-209ENST00000487211 BRINP3Q76B58 766 aa8.63□□□□□ -1.03
RTFDC1-209ENST00000487211 TMEM102Q8N9M5 508 aaPredicted RBP8.63□□□□□ -1.03
RTFDC1-209ENST00000487211 ASAP3Q8TDY4 903 aa8.63□□□□□ -1.03
RTFDC1-209ENST00000487211 DDX17Q92841 729 aaKnown RBP8.63□□□□□ -1.03
RTFDC1-209ENST00000487211 IRF7Q92985 503 aa8.63□□□□□ -1.03
RTFDC1-209ENST00000487211 NXPE3Q969Y0 559 aa8.63□□□□□ -1.03
RTFDC1-209ENST00000487211 PLD4Q96BZ4 506 aa8.63□□□□□ -1.03
RTFDC1-209ENST00000487211 METTL5Q9NRN9 209 aaKnown RBP8.63□□□□□ -1.03
RTFDC1-209ENST00000487211 AKAP2Q9Y2D5 859 aa8.63□□□□□ -1.03
RTFDC1-209ENST00000487211 DLC1Q96QB1 1528 aa8.63□□□□□ -1.03
RTFDC1-209ENST00000487211 LAMC1P11047 1609 aa8.62□□□□□ -1.03
RTFDC1-209ENST00000487211 CENPJQ9HC77 1338 aaPredicted RBP8.62□□□□□ -1.03
RTFDC1-209ENST00000487211 ELOA3CA0A087WX78 387 aaPredicted RBP8.62□□□□□ -1.03
RTFDC1-209ENST00000487211 ELOA3DA6NLF2 546 aaPredicted RBP8.62□□□□□ -1.03
RTFDC1-209ENST00000487211 SMNDC1O75940 238 aaKnown RBP eCLIP8.62□□□□□ -1.03
RTFDC1-209ENST00000487211 GRIA4P48058 902 aa8.62□□□□□ -1.03
RTFDC1-209ENST00000487211 ELOA3BQ3SY89 546 aa8.62□□□□□ -1.03
RTFDC1-209ENST00000487211 GOLGA6L1Q8N7Z2 621 aa8.62□□□□□ -1.03
RTFDC1-209ENST00000487211 ELOA3Q8NG57 546 aa8.62□□□□□ -1.03
RTFDC1-209ENST00000487211 CDK19Q9BWU1 502 aa8.62□□□□□ -1.03
RTFDC1-209ENST00000487211 BHLHE41Q9C0J9 482 aaPredicted RBP8.62□□□□□ -1.03
RTFDC1-209ENST00000487211 NAGPAQ9UK23 515 aa8.62□□□□□ -1.03
RTFDC1-209ENST00000487211 TTF2Q9UNY4 1162 aaKnown RBP8.62□□□□□ -1.03
RTFDC1-209ENST00000487211 KIAA1210Q9ULL0 1709 aa8.62□□□□□ -1.03
RTFDC1-209ENST00000487211 MST1RQ04912 1400 aa8.62□□□□□ -1.03
RTFDC1-209ENST00000487211 TRPM1Q7Z4N2 1603 aa8.62□□□□□ -1.03
RTFDC1-209ENST00000487211 USP31Q70CQ4 1352 aa8.61□□□□□ -1.03
RTFDC1-209ENST00000487211 ST20-MTHFSA0A0A6YYL1 179 aa8.61□□□□□ -1.03
RTFDC1-209ENST00000487211 XRCC5P13010 732 aaKnown RBP8.61□□□□□ -1.03
RTFDC1-209ENST00000487211 ALAS2P22557 587 aa8.61□□□□□ -1.03
RTFDC1-209ENST00000487211 ERCC5P28715 1186 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms