RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 HOXD10P28358 340 aa8.08□□□□□ -1.12
CTDSPL-208ENST00000486978 MMP14P50281 582 aa8.08□□□□□ -1.12
CTDSPL-208ENST00000486978 CHRNDQ07001 517 aa8.08□□□□□ -1.12
CTDSPL-208ENST00000486978 CCDC57Q2TAC2 916 aa8.08□□□□□ -1.12
CTDSPL-208ENST00000486978 EPHA10Q5JZY3 1008 aa8.08□□□□□ -1.12
CTDSPL-208ENST00000486978 GPAT2Q6NUI2 795 aa8.08□□□□□ -1.12
CTDSPL-208ENST00000486978 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.08□□□□□ -1.12
CTDSPL-208ENST00000486978 SUCLG2Q96I99 432 aa8.08□□□□□ -1.12
CTDSPL-208ENST00000486978 ANKRD2Q9GZV1 360 aa8.08□□□□□ -1.12
CTDSPL-208ENST00000486978 ZCCHC17Q9NP64 241 aaKnown RBP8.08□□□□□ -1.12
CTDSPL-208ENST00000486978 LEMD3Q9Y2U8 911 aa8.08□□□□□ -1.12
CTDSPL-208ENST00000486978 LTBP2Q14767 1821 aa8.08□□□□□ -1.12
CTDSPL-208ENST00000486978 NBPF7P0C2Y1 421 aaPredicted RBP8.07□□□□□ -1.12
CTDSPL-208ENST00000486978 GRIK5Q16478 980 aa8.07□□□□□ -1.12
CTDSPL-208ENST00000486978 LRRC26Q2I0M4 334 aa8.07□□□□□ -1.12
CTDSPL-208ENST00000486978 TAF7LQ5H9L4 462 aa8.07□□□□□ -1.12
CTDSPL-208ENST00000486978 NCOR1O75376 2440 aa8.06□□□□□ -1.12
CTDSPL-208ENST00000486978 KCNJ4P48050 445 aa8.06□□□□□ -1.12
CTDSPL-208ENST00000486978 RBM5P52756 815 aaKnown RBP eCLIP8.06□□□□□ -1.12
CTDSPL-208ENST00000486978 RARSP54136 660 aaKnown RBP8.06□□□□□ -1.12
CTDSPL-208ENST00000486978 CACNB3P54284 484 aa8.06□□□□□ -1.12
CTDSPL-208ENST00000486978 PPIL2Q13356 520 aa8.06□□□□□ -1.12
CTDSPL-208ENST00000486978 SNAPC2Q13487 334 aa8.06□□□□□ -1.12
CTDSPL-208ENST00000486978 TJAP1Q5JTD0 557 aa8.06□□□□□ -1.12
CTDSPL-208ENST00000486978 ZNF697Q5TEC3 545 aa8.06□□□□□ -1.12
CTDSPL-208ENST00000486978 LDHAL6AQ6ZMR3 332 aa8.06□□□□□ -1.12
CTDSPL-208ENST00000486978 ANKRD23Q86SG2 305 aa8.06□□□□□ -1.12
CTDSPL-208ENST00000486978 ERO1BQ86YB8 467 aa8.06□□□□□ -1.12
CTDSPL-208ENST00000486978 HELBQ8NG08 1087 aaPredicted RBP8.06□□□□□ -1.12
CTDSPL-208ENST00000486978 SYMPKQ92797 1274 aaKnown RBP8.06□□□□□ -1.12
CTDSPL-208ENST00000486978 KAZALD1Q96I82 304 aa8.06□□□□□ -1.12
CTDSPL-208ENST00000486978 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.06□□□□□ -1.12
CTDSPL-208ENST00000486978 BICC1Q9H694 974 aaKnown RBP8.06□□□□□ -1.12
CTDSPL-208ENST00000486978 CSADQ9Y600 493 aa8.06□□□□□ -1.12
CTDSPL-208ENST00000486978 KIF16BQ96L93 1317 aa8.05□□□□□ -1.12
CTDSPL-208ENST00000486978 PTPRFP10586 1907 aa8.05□□□□□ -1.12
CTDSPL-208ENST00000486978 TAF5LO75529 589 aa8.05□□□□□ -1.12
CTDSPL-208ENST00000486978 INPP5BP32019 993 aa8.05□□□□□ -1.12
CTDSPL-208ENST00000486978 FCGRTP55899 365 aa8.05□□□□□ -1.12
CTDSPL-208ENST00000486978 HNRNPUQ00839 825 aaKnown RBP eCLIP8.05□□□□□ -1.12
CTDSPL-208ENST00000486978 SHHQ15465 462 aa8.05□□□□□ -1.12
CTDSPL-208ENST00000486978 RABL6Q3YEC7 729 aaPredicted RBP8.05□□□□□ -1.12
CTDSPL-208ENST00000486978 C9orf50Q5SZB4 431 aa8.05□□□□□ -1.12
CTDSPL-208ENST00000486978 C15orf52Q6ZUT6 534 aaKnown RBP8.05□□□□□ -1.12
CTDSPL-208ENST00000486978 PXYLP1Q8TE99 480 aa8.05□□□□□ -1.12
CTDSPL-208ENST00000486978 ZNF594Q96JF6 807 aaPredicted RBP8.05□□□□□ -1.12
CTDSPL-208ENST00000486978 WRNIP1Q96S55 665 aa8.05□□□□□ -1.12
CTDSPL-208ENST00000486978 API5Q9BZZ5 524 aaKnown RBP8.05□□□□□ -1.12
CTDSPL-208ENST00000486978 NBPF3Q9H094 633 aa8.05□□□□□ -1.12
CTDSPL-208ENST00000486978 USP44Q9H0E7 712 aa8.05□□□□□ -1.12
CTDSPL-208ENST00000486978 C11orf49Q9H6J7 331 aa8.05□□□□□ -1.12
CTDSPL-208ENST00000486978 CNNM1Q9NRU3 951 aa8.05□□□□□ -1.12
CTDSPL-208ENST00000486978 NOB1Q9ULX3 412 aaKnown RBP8.05□□□□□ -1.12
CTDSPL-208ENST00000486978 USP34Q70CQ2 3546 aa8.05□□□□□ -1.12
CTDSPL-208ENST00000486978 MAST2Q6P0Q8 1798 aa8.05□□□□□ -1.12
CTDSPL-208ENST00000486978 SYNGAP1Q96PV0 1343 aa8.04□□□□□ -1.12
CTDSPL-208ENST00000486978 FRMPD3Q5JV73 1810 aa8.04□□□□□ -1.12
CTDSPL-208ENST00000486978 PHIPQ8WWQ0 1821 aa8.04□□□□□ -1.12
CTDSPL-208ENST00000486978 MYO1BO43795 1136 aa8.04□□□□□ -1.12
CTDSPL-208ENST00000486978 COL6A1P12109 1028 aa8.04□□□□□ -1.12
CTDSPL-208ENST00000486978 MIGA2Q7L4E1 593 aa8.04□□□□□ -1.12
CTDSPL-208ENST00000486978 DZIP1LQ8IYY4 767 aaKnown RBP8.04□□□□□ -1.12
CTDSPL-208ENST00000486978 ANKRD44Q8N8A2 993 aa8.04□□□□□ -1.12
CTDSPL-208ENST00000486978 TAOK2Q9UL54 1235 aa8.04□□□□□ -1.12
CTDSPL-208ENST00000486978 FAM205AQ6ZU69 1335 aa8.03□□□□□ -1.12
CTDSPL-208ENST00000486978 PLIN1O60240 522 aa8.03□□□□□ -1.12
CTDSPL-208ENST00000486978 WDHD1O75717 1129 aaPredicted RBP8.03□□□□□ -1.12
CTDSPL-208ENST00000486978 IL1R1P14778 569 aa8.03□□□□□ -1.12
CTDSPL-208ENST00000486978 FOSL2P15408 326 aa8.03□□□□□ -1.12
CTDSPL-208ENST00000486978 PPATQ06203 517 aa8.03□□□□□ -1.12
CTDSPL-208ENST00000486978 IRF5Q13568 498 aa8.03□□□□□ -1.12
CTDSPL-208ENST00000486978 ZNF804AQ7Z570 1209 aa8.03□□□□□ -1.12
CTDSPL-208ENST00000486978 ANKLE1Q8NAG6 615 aa8.03□□□□□ -1.12
CTDSPL-208ENST00000486978 ARHGAP45Q92619 1136 aa8.03□□□□□ -1.12
CTDSPL-208ENST00000486978 SNX27Q96L92 541 aa8.03□□□□□ -1.12
CTDSPL-208ENST00000486978 NECAB3Q96P71 396 aaPredicted RBP8.03□□□□□ -1.12
CTDSPL-208ENST00000486978 PUS3Q9BZE2 481 aaKnown RBP8.03□□□□□ -1.12
CTDSPL-208ENST00000486978 OGDHLQ9ULD0 1010 aa8.03□□□□□ -1.12
CTDSPL-208ENST00000486978 KCNH4Q9UQ05 1017 aa8.03□□□□□ -1.12
CTDSPL-208ENST00000486978 MROH5Q6ZUA9 1318 aa8.03□□□□□ -1.12
CTDSPL-208ENST00000486978 IPO8O15397 1037 aaKnown RBP8.02□□□□□ -1.13
CTDSPL-208ENST00000486978 UBTFL1P0CB47 393 aaPredicted RBP8.02□□□□□ -1.13
CTDSPL-208ENST00000486978 SLURP2P0DP57 97 aa8.02□□□□□ -1.13
CTDSPL-208ENST00000486978 UBE4AQ14139 1066 aa8.02□□□□□ -1.13
CTDSPL-208ENST00000486978 GRIN2CQ14957 1233 aa8.02□□□□□ -1.13
CTDSPL-208ENST00000486978 ALYREFQ86V81 257 aaKnown RBP8.02□□□□□ -1.13
CTDSPL-208ENST00000486978 GJD2Q9UKL4 321 aa8.02□□□□□ -1.13
CTDSPL-208ENST00000486978 HDAC5Q9UQL6 1122 aa8.02□□□□□ -1.13
CTDSPL-208ENST00000486978 HAX1O00165 279 aa8.01□□□□□ -1.13
CTDSPL-208ENST00000486978 TNPO2O14787 897 aaKnown RBP8.01□□□□□ -1.13
CTDSPL-208ENST00000486978 CRKP46108 304 aa8.01□□□□□ -1.13
CTDSPL-208ENST00000486978 FKBP1AP62942 108 aaKnown RBP8.01□□□□□ -1.13
CTDSPL-208ENST00000486978 LRRC24Q50LG9 513 aa8.01□□□□□ -1.13
CTDSPL-208ENST00000486978 METTL24Q5JXM2 366 aa8.01□□□□□ -1.13
CTDSPL-208ENST00000486978 ADAMTS19Q8TE59 1207 aa8.01□□□□□ -1.13
CTDSPL-208ENST00000486978 TTF2Q9UNY4 1162 aaKnown RBP8.01□□□□□ -1.13
CTDSPL-208ENST00000486978 TRANK1O15050 2925 aa8.01□□□□□ -1.13
CTDSPL-208ENST00000486978 CFAP54Q96N23 3096 aa8.01□□□□□ -1.13
CTDSPL-208ENST00000486978 ZBED9Q6R2W3 1325 aa8.01□□□□□ -1.13
CTDSPL-208ENST00000486978 MYO9BQ13459 2157 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms