RNA–Protein interactions for RNA: ENST00000486263.1

NELFCD-209, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-209ENST00000486263 NBPF9Q3BBW0 867 aa16.56■□□□□ 0.24
NELFCD-209ENST00000486263 GIMAP6Q6P9H5 292 aa16.56■□□□□ 0.24
NELFCD-209ENST00000486263 MAPKAPK5Q8IW41 473 aa16.56■□□□□ 0.24
NELFCD-209ENST00000486263 IFNL3Q8IZI9 196 aa16.56■□□□□ 0.24
NELFCD-209ENST00000486263 MAP4K1Q92918 833 aa16.56■□□□□ 0.24
NELFCD-209ENST00000486263 ZNF70Q9UC06 446 aaPredicted RBP16.56■□□□□ 0.24
NELFCD-209ENST00000486263 TNNI2P48788 182 aa16.55■□□□□ 0.24
NELFCD-209ENST00000486263 CACNB3P54284 484 aa16.55■□□□□ 0.24
NELFCD-209ENST00000486263 RNF20Q5VTR2 975 aa16.55■□□□□ 0.24
NELFCD-209ENST00000486263 TRPM4Q8TD43 1214 aa16.55■□□□□ 0.24
NELFCD-209ENST00000486263 MCM9Q9NXL9 1143 aa16.55■□□□□ 0.24
NELFCD-209ENST00000486263 PGAP2Q9UHJ9 254 aa16.55■□□□□ 0.24
NELFCD-209ENST00000486263 RBM8AQ9Y5S9 174 aaKnown RBP16.55■□□□□ 0.24
NELFCD-209ENST00000486263 TCP10L2B9ZVM9 353 aa16.54■□□□□ 0.24
NELFCD-209ENST00000486263 EGFRP00533 1210 aa16.54■□□□□ 0.24
NELFCD-209ENST00000486263 FGAP02671 866 aa16.54■□□□□ 0.24
NELFCD-209ENST00000486263 POLR3DP05423 398 aaPredicted RBP16.54■□□□□ 0.24
NELFCD-209ENST00000486263 TNFAIP1Q13829 316 aa16.54■□□□□ 0.24
NELFCD-209ENST00000486263 ALX1Q15699 326 aa16.54■□□□□ 0.24
NELFCD-209ENST00000486263 IMMTQ16891 758 aaKnown RBP16.54■□□□□ 0.24
NELFCD-209ENST00000486263 SPDYE2Q495Y8 402 aa16.54■□□□□ 0.24
NELFCD-209ENST00000486263 DNAJC5GQ8N7S2 189 aa16.54■□□□□ 0.24
NELFCD-209ENST00000486263 ZBED3Q96IU2 234 aaPredicted RBP16.54■□□□□ 0.24
NELFCD-209ENST00000486263 IDI2Q9BXS1 227 aa16.54■□□□□ 0.24
NELFCD-209ENST00000486263 USP26Q9BXU7 913 aa16.54■□□□□ 0.24
NELFCD-209ENST00000486263 DCP1AQ9NPI6 582 aaPredicted RBP16.54■□□□□ 0.24
NELFCD-209ENST00000486263 FLT1P17948 1338 aa16.53■□□□□ 0.24
NELFCD-209ENST00000486263 ZNF213O14771 459 aa16.53■□□□□ 0.24
NELFCD-209ENST00000486263 WDHD1O75717 1129 aaPredicted RBP16.53■□□□□ 0.24
NELFCD-209ENST00000486263 TCP10Q12799 353 aa16.53■□□□□ 0.24
NELFCD-209ENST00000486263 ZSCAN29Q8IWY8 852 aaPredicted RBP16.53■□□□□ 0.24
NELFCD-209ENST00000486263 SAP30BPQ9UHR5 308 aaKnown RBP16.53■□□□□ 0.24
NELFCD-209ENST00000486263 MINDY4BA8MYZ0 360 aa16.52■□□□□ 0.24
NELFCD-209ENST00000486263 ENTPD3O75355 529 aa16.52■□□□□ 0.24
NELFCD-209ENST00000486263 ZKSCAN1P17029 563 aaPredicted RBP16.52■□□□□ 0.24
NELFCD-209ENST00000486263 ANGEL2Q5VTE6 544 aaKnown RBP16.52■□□□□ 0.24
NELFCD-209ENST00000486263 FKBP1CQ5VVH2 108 aa16.52■□□□□ 0.24
NELFCD-209ENST00000486263 MAP1SQ66K74 1059 aaPredicted RBP16.52■□□□□ 0.24
NELFCD-209ENST00000486263 APOBEC3FQ8IUX4 373 aaKnown RBP16.52■□□□□ 0.24
NELFCD-209ENST00000486263 DCPSQ96C86 337 aaKnown RBP16.52■□□□□ 0.24
NELFCD-209ENST00000486263 C22orf23Q9BZE7 217 aa16.52■□□□□ 0.24
NELFCD-209ENST00000486263 EPB41L4AQ9HCS5 686 aaPredicted RBP16.52■□□□□ 0.24
NELFCD-209ENST00000486263 CREBZFQ9NS37 354 aa16.52■□□□□ 0.24
NELFCD-209ENST00000486263 ARPP21Q9UBL0 812 aaPredicted RBP16.52■□□□□ 0.24
NELFCD-209ENST00000486263 ZMYM6O95789 1325 aa16.51■□□□□ 0.23
NELFCD-209ENST00000486263 USP17L12C9JPN9 530 aa16.51■□□□□ 0.23
NELFCD-209ENST00000486263 USP17L21D6R901 530 aa16.51■□□□□ 0.23
NELFCD-209ENST00000486263 NPM3O75607 178 aaKnown RBP16.51■□□□□ 0.23
NELFCD-209ENST00000486263 HLA-DOAP06340 250 aa16.51■□□□□ 0.23
NELFCD-209ENST00000486263 SLC3A2P08195 630 aaKnown RBP16.51■□□□□ 0.23
NELFCD-209ENST00000486263 HIRAP54198 1017 aaPredicted RBP16.51■□□□□ 0.23
NELFCD-209ENST00000486263 NFIAQ12857 509 aa16.51■□□□□ 0.23
NELFCD-209ENST00000486263 TTC6Q86TZ1 520 aa16.51■□□□□ 0.23
NELFCD-209ENST00000486263 OSBPL5Q9H0X9 879 aaPredicted RBP16.51■□□□□ 0.23
NELFCD-209ENST00000486263 DDX4Q9NQI0 724 aaKnown RBP16.51■□□□□ 0.23
NELFCD-209ENST00000486263 GGA3Q9NZ52 723 aa16.51■□□□□ 0.23
NELFCD-209ENST00000486263 POLR2AP24928 1970 aaKnown RBP16.51■□□□□ 0.23
NELFCD-209ENST00000486263 FOXP2O15409 715 aa16.5■□□□□ 0.23
NELFCD-209ENST00000486263 SLC4A8Q2Y0W8 1093 aa16.5■□□□□ 0.23
NELFCD-209ENST00000486263 CREB3L3Q68CJ9 461 aa16.5■□□□□ 0.23
NELFCD-209ENST00000486263 CTR9Q6PD62 1173 aa16.5■□□□□ 0.23
NELFCD-209ENST00000486263 FAM83AQ86UY5 434 aa16.5■□□□□ 0.23
NELFCD-209ENST00000486263 FAM151AQ8WW52 585 aa16.5■□□□□ 0.23
NELFCD-209ENST00000486263 KLRG1Q96E93 195 aa16.5■□□□□ 0.23
NELFCD-209ENST00000486263 TRIM34Q9BYJ4 488 aa16.5■□□□□ 0.23
NELFCD-209ENST00000486263 DHX36Q9H2U1 1008 aaKnown RBP16.5■□□□□ 0.23
NELFCD-209ENST00000486263 FAM198AQ9UFP1 575 aa16.5■□□□□ 0.23
NELFCD-209ENST00000486263 PALD1Q9ULE6 856 aa16.5■□□□□ 0.23
NELFCD-209ENST00000486263 TRPM7Q96QT4 1865 aa16.5■□□□□ 0.23
NELFCD-209ENST00000486263 TMEM88BA6NKF7 163 aa16.49■□□□□ 0.23
NELFCD-209ENST00000486263 SLC27A2O14975 620 aa16.49■□□□□ 0.23
NELFCD-209ENST00000486263 HSPA4P34932 840 aa16.49■□□□□ 0.23
NELFCD-209ENST00000486263 HAND2P61296 217 aa16.49■□□□□ 0.23
NELFCD-209ENST00000486263 PPARAQ07869 468 aa16.49■□□□□ 0.23
NELFCD-209ENST00000486263 NECTIN1Q15223 517 aa16.49■□□□□ 0.23
NELFCD-209ENST00000486263 SBK1Q52WX2 424 aa16.49■□□□□ 0.23
NELFCD-209ENST00000486263 MKRN1Q9UHC7 482 aaKnown RBP16.49■□□□□ 0.23
NELFCD-209ENST00000486263 ASTN2O75129 1339 aaPredicted RBP16.48■□□□□ 0.23
NELFCD-209ENST00000486263 PITPNM2Q9BZ72 1349 aa16.48■□□□□ 0.23
NELFCD-209ENST00000486263 RASA3Q14644 834 aa16.48■□□□□ 0.23
NELFCD-209ENST00000486263 C12orf60Q5U649 245 aa16.48■□□□□ 0.23
NELFCD-209ENST00000486263 CDC37L1Q7L3B6 337 aa16.48■□□□□ 0.23
NELFCD-209ENST00000486263 SULF1Q8IWU6 871 aa16.48■□□□□ 0.23
NELFCD-209ENST00000486263 STK11IPQ8N1F8 1099 aa16.48■□□□□ 0.23
NELFCD-209ENST00000486263 ECM29Q5VYK3 1845 aa16.47■□□□□ 0.23
NELFCD-209ENST00000486263 CYP2D7A0A087X1C5 515 aa16.47■□□□□ 0.23
NELFCD-209ENST00000486263 CYP21A2P08686 494 aa16.47■□□□□ 0.23
NELFCD-209ENST00000486263 CYP2D6P10635 497 aa16.47■□□□□ 0.23
NELFCD-209ENST00000486263 HTRA3P83110 453 aa16.47■□□□□ 0.23
NELFCD-209ENST00000486263 CTDSPL2Q05D32 466 aa16.47■□□□□ 0.23
NELFCD-209ENST00000486263 TRDNQ13061 729 aa16.47■□□□□ 0.23
NELFCD-209ENST00000486263 KRT32Q14532 448 aa16.47■□□□□ 0.23
NELFCD-209ENST00000486263 ZFPM1Q8IX07 1006 aa16.47■□□□□ 0.23
NELFCD-209ENST00000486263 CRACR2BQ8N4Y2 399 aaPredicted RBP16.47■□□□□ 0.23
NELFCD-209ENST00000486263 DEFB129Q9H1M3 183 aa16.47■□□□□ 0.23
NELFCD-209ENST00000486263 RNF41Q9H4P4 317 aaPredicted RBP16.47■□□□□ 0.23
NELFCD-209ENST00000486263 ZNF287Q9HBT7 754 aa16.47■□□□□ 0.23
NELFCD-209ENST00000486263 TOMM22Q9NS69 142 aa16.47■□□□□ 0.23
NELFCD-209ENST00000486263 PDE4BQ07343 736 aa16.46■□□□□ 0.23
NELFCD-209ENST00000486263 MFSD6Q6ZSS7 791 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms