RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 ZFYVE28Q9HCC9 887 aa15.78■□□□□ 0.12
SSR4-211ENST00000486204 SNRKQ9NRH2 765 aa15.78■□□□□ 0.12
SSR4-211ENST00000486204 RANBP2P49792 3224 aaKnown RBP15.77■□□□□ 0.12
SSR4-211ENST00000486204 LAMB1P07942 1786 aa15.77■□□□□ 0.12
SSR4-211ENST00000486204 IGHDP01880 384 aa15.77■□□□□ 0.12
SSR4-211ENST00000486204 CYP2E1P05181 493 aaPredicted RBP15.77■□□□□ 0.12
SSR4-211ENST00000486204 LDHBP07195 334 aaKnown RBP15.77■□□□□ 0.12
SSR4-211ENST00000486204 IFIT2P09913 472 aaKnown RBP15.77■□□□□ 0.12
SSR4-211ENST00000486204 ZAP70P43403 619 aa15.77■□□□□ 0.12
SSR4-211ENST00000486204 DIXDC1Q155Q3 683 aa15.77■□□□□ 0.12
SSR4-211ENST00000486204 TBC1D9Q6ZT07 1266 aa15.77■□□□□ 0.12
SSR4-211ENST00000486204 SMC5Q8IY18 1101 aa15.77■□□□□ 0.12
SSR4-211ENST00000486204 ZDHHC15Q96MV8 337 aa15.77■□□□□ 0.12
SSR4-211ENST00000486204 PPP2R3BQ9Y5P8 575 aa15.77■□□□□ 0.12
SSR4-211ENST00000486204 MYH1P12882 1939 aa15.76■□□□□ 0.11
SSR4-211ENST00000486204 GAKO14976 1311 aa15.76■□□□□ 0.11
SSR4-211ENST00000486204 SALL3Q9BXA9 1300 aa15.76■□□□□ 0.11
SSR4-211ENST00000486204 SIPA1L1O43166 1804 aa15.76■□□□□ 0.11
SSR4-211ENST00000486204 USP2O75604 605 aaPredicted RBP15.76■□□□□ 0.11
SSR4-211ENST00000486204 TAF1CQ15572 869 aaPredicted RBP15.76■□□□□ 0.11
SSR4-211ENST00000486204 HHIPL2Q6UWX4 724 aa15.76■□□□□ 0.11
SSR4-211ENST00000486204 ANKRD13AQ8IZ07 590 aa15.76■□□□□ 0.11
SSR4-211ENST00000486204 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.76■□□□□ 0.11
SSR4-211ENST00000486204 TEKT1Q969V4 418 aa15.76■□□□□ 0.11
SSR4-211ENST00000486204 HTATIP2Q9BUP3 242 aa15.76■□□□□ 0.11
SSR4-211ENST00000486204 ABCF2Q9UG63 623 aa15.76■□□□□ 0.11
SSR4-211ENST00000486204 DAGLAQ9Y4D2 1042 aa15.76■□□□□ 0.11
SSR4-211ENST00000486204 NR2E3Q9Y5X4 410 aa15.76■□□□□ 0.11
SSR4-211ENST00000486204 NDUFB9Q9Y6M9 179 aa15.76■□□□□ 0.11
SSR4-211ENST00000486204 DDX60LQ5H9U9 1706 aaKnown RBP15.76■□□□□ 0.11
SSR4-211ENST00000486204 SOX1O00570 391 aaPredicted RBP15.75■□□□□ 0.11
SSR4-211ENST00000486204 SPDYE2Q495Y8 402 aa15.75■□□□□ 0.11
SSR4-211ENST00000486204 APOBEC3HQ6NTF7 200 aaKnown RBP15.75■□□□□ 0.11
SSR4-211ENST00000486204 SHISA4Q96DD7 197 aa15.75■□□□□ 0.11
SSR4-211ENST00000486204 MS4A4AQ96JQ5 239 aa15.75■□□□□ 0.11
SSR4-211ENST00000486204 BCL11AQ9H165 835 aa15.75■□□□□ 0.11
SSR4-211ENST00000486204 PIH1D3Q9NQM4 214 aaKnown RBP15.75■□□□□ 0.11
SSR4-211ENST00000486204 NAV1Q8NEY1 1877 aa15.75■□□□□ 0.11
SSR4-211ENST00000486204 SSC5DA1L4H1 1573 aa15.75■□□□□ 0.11
SSR4-211ENST00000486204 RFX7Q2KHR2 1363 aa15.75■□□□□ 0.11
SSR4-211ENST00000486204 A0A1W2PPC1 479 aa15.74■□□□□ 0.11
SSR4-211ENST00000486204 CLRN2A0PK11 232 aa15.74■□□□□ 0.11
SSR4-211ENST00000486204 ATP5JP18859 108 aa15.74■□□□□ 0.11
SSR4-211ENST00000486204 RBM5P52756 815 aaKnown RBP eCLIP15.74■□□□□ 0.11
SSR4-211ENST00000486204 MECOMQ03112 1051 aa15.74■□□□□ 0.11
SSR4-211ENST00000486204 KIF22Q14807 665 aa15.74■□□□□ 0.11
SSR4-211ENST00000486204 MTFR1Q15390 333 aa15.74■□□□□ 0.11
SSR4-211ENST00000486204 NBPF12Q5TAG4 269 aaPredicted RBP15.74■□□□□ 0.11
SSR4-211ENST00000486204 SPTY2D1Q68D10 685 aaPredicted RBP15.74■□□□□ 0.11
SSR4-211ENST00000486204 ERICH6Q7L0X2 663 aa15.74■□□□□ 0.11
SSR4-211ENST00000486204 OTUD7AQ8TE49 926 aaPredicted RBP15.74■□□□□ 0.11
SSR4-211ENST00000486204 NSUN4Q96CB9 384 aaKnown RBP15.74■□□□□ 0.11
SSR4-211ENST00000486204 OPTNQ96CV9 577 aa15.74■□□□□ 0.11
SSR4-211ENST00000486204 LRCH3Q96II8 777 aa15.74■□□□□ 0.11
SSR4-211ENST00000486204 RWDD1Q9H446 243 aaPredicted RBP15.74■□□□□ 0.11
SSR4-211ENST00000486204 ANTXR1Q9H6X2 564 aa15.74■□□□□ 0.11
SSR4-211ENST00000486204 TDRD3Q9H7E2 651 aaKnown RBP15.74■□□□□ 0.11
SSR4-211ENST00000486204 ELP3Q9H9T3 547 aa15.74■□□□□ 0.11
SSR4-211ENST00000486204 CEP290O15078 2479 aa15.74■□□□□ 0.11
SSR4-211ENST00000486204 DZIP1Q86YF9 867 aaKnown RBP15.73■□□□□ 0.11
SSR4-211ENST00000486204 NKX2-3Q8TAU0 364 aa15.73■□□□□ 0.11
SSR4-211ENST00000486204 BRI3BPQ8WY22 251 aa15.73■□□□□ 0.11
SSR4-211ENST00000486204 FAM163AQ96GL9 167 aaPredicted RBP15.73■□□□□ 0.11
SSR4-211ENST00000486204 ARHGAP39Q9C0H5 1083 aa15.73■□□□□ 0.11
SSR4-211ENST00000486204 ZNF70Q9UC06 446 aaPredicted RBP15.73■□□□□ 0.11
SSR4-211ENST00000486204 BAZ2AQ9UIF9 1905 aaKnown RBP15.72■□□□□ 0.11
SSR4-211ENST00000486204 MROH7-TTC4A0A0A0MT08 1334 aa15.72■□□□□ 0.11
SSR4-211ENST00000486204 CCL15-CCL14A0A0B4J2E2 113 aa15.72■□□□□ 0.11
SSR4-211ENST00000486204 MYO1BO43795 1136 aa15.72■□□□□ 0.11
SSR4-211ENST00000486204 GNRH1P01148 92 aa15.72■□□□□ 0.11
SSR4-211ENST00000486204 CCL15Q16663 113 aa15.72■□□□□ 0.11
SSR4-211ENST00000486204 ECHDC1Q9NTX5 307 aa15.72■□□□□ 0.11
SSR4-211ENST00000486204 ATAD5Q96QE3 1844 aa15.72■□□□□ 0.11
SSR4-211ENST00000486204 GTF2A2P52657 109 aa15.71■□□□□ 0.11
SSR4-211ENST00000486204 PRMT2P55345 433 aa15.71■□□□□ 0.11
SSR4-211ENST00000486204 ANKRD45Q5TZF3 282 aa15.71■□□□□ 0.11
SSR4-211ENST00000486204 TSHZ3Q63HK5 1081 aa15.71■□□□□ 0.11
SSR4-211ENST00000486204 UBE2Q1Q7Z7E8 422 aa15.71■□□□□ 0.11
SSR4-211ENST00000486204 FAM43AQ8N2R8 423 aa15.71■□□□□ 0.11
SSR4-211ENST00000486204 EDC3Q96F86 508 aaKnown RBP15.71■□□□□ 0.11
SSR4-211ENST00000486204 HAUS7Q99871 368 aa15.71■□□□□ 0.11
SSR4-211ENST00000486204 BOLA2Q9H3K6 86 aa15.71■□□□□ 0.11
SSR4-211ENST00000486204 VEZTQ9HBM0 779 aa15.71■□□□□ 0.11
SSR4-211ENST00000486204 RAI14Q9P0K7 980 aa15.71■□□□□ 0.11
SSR4-211ENST00000486204 LRP2BPQ9P2M1 347 aa15.71■□□□□ 0.11
SSR4-211ENST00000486204 MYH8P13535 1937 aa15.7■□□□□ 0.1
SSR4-211ENST00000486204 IGSF3O75054 1194 aa15.7■□□□□ 0.1
SSR4-211ENST00000486204 WDHD1O75717 1129 aaPredicted RBP15.7■□□□□ 0.1
SSR4-211ENST00000486204 GJA8P48165 433 aa15.7■□□□□ 0.1
SSR4-211ENST00000486204 CACNB3P54284 484 aa15.7■□□□□ 0.1
SSR4-211ENST00000486204 LACTBP83111 547 aaPredicted RBP15.7■□□□□ 0.1
SSR4-211ENST00000486204 CDC42EP5Q6NZY7 148 aa15.7■□□□□ 0.1
SSR4-211ENST00000486204 ADGRA1Q86SQ6 560 aa15.7■□□□□ 0.1
SSR4-211ENST00000486204 PI4K2BQ8TCG2 481 aa15.7■□□□□ 0.1
SSR4-211ENST00000486204 TTC41PQ6P2S7 1318 aa15.69■□□□□ 0.1
SSR4-211ENST00000486204 GPR75-ASB3A0A0A6YYF3 556 aa15.69■□□□□ 0.1
SSR4-211ENST00000486204 GOLIM4O00461 696 aa15.69■□□□□ 0.1
SSR4-211ENST00000486204 CENPBP07199 599 aaPredicted RBP15.69■□□□□ 0.1
SSR4-211ENST00000486204 RASA3Q14644 834 aa15.69■□□□□ 0.1
SSR4-211ENST00000486204 SLF2Q8IX21 1173 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms