RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 COL1A1P02452 1464 aaPredicted RBP9.96□□□□□ -0.82
SF3A1-208ENST00000485618 ENTPD3O75355 529 aa9.95□□□□□ -0.82
SF3A1-208ENST00000485618 GNAT2P19087 354 aa9.95□□□□□ -0.82
SF3A1-208ENST00000485618 USP5P45974 858 aa9.95□□□□□ -0.82
SF3A1-208ENST00000485618 FKBP1BP68106 108 aa9.95□□□□□ -0.82
SF3A1-208ENST00000485618 KIF23Q02241 960 aaPredicted RBP9.95□□□□□ -0.82
SF3A1-208ENST00000485618 RASA3Q14644 834 aa9.95□□□□□ -0.82
SF3A1-208ENST00000485618 GRIK5Q16478 980 aa9.95□□□□□ -0.82
SF3A1-208ENST00000485618 ZSCAN29Q8IWY8 852 aaPredicted RBP9.95□□□□□ -0.82
SF3A1-208ENST00000485618 OTUD7AQ8TE49 926 aaPredicted RBP9.95□□□□□ -0.82
SF3A1-208ENST00000485618 FAM151AQ8WW52 585 aa9.95□□□□□ -0.82
SF3A1-208ENST00000485618 CDCA5Q96FF9 252 aa9.95□□□□□ -0.82
SF3A1-208ENST00000485618 IDI2Q9BXS1 227 aa9.95□□□□□ -0.82
SF3A1-208ENST00000485618 DHX36Q9H2U1 1008 aaKnown RBP9.95□□□□□ -0.82
SF3A1-208ENST00000485618 ANTXR1Q9H6X2 564 aa9.95□□□□□ -0.82
SF3A1-208ENST00000485618 ZNF532Q9HCE3 1301 aa9.95□□□□□ -0.82
SF3A1-208ENST00000485618 SALL3Q9BXA9 1300 aa9.94□□□□□ -0.82
SF3A1-208ENST00000485618 UNCXA6NJT0 531 aa9.94□□□□□ -0.82
SF3A1-208ENST00000485618 TCP10L2B9ZVM9 353 aa9.94□□□□□ -0.82
SF3A1-208ENST00000485618 SLC10A3P09131 477 aa9.94□□□□□ -0.82
SF3A1-208ENST00000485618 ADD2P35612 726 aa9.94□□□□□ -0.82
SF3A1-208ENST00000485618 TTLL12Q14166 644 aaPredicted RBP9.94□□□□□ -0.82
SF3A1-208ENST00000485618 TSHZ3Q63HK5 1081 aa9.94□□□□□ -0.82
SF3A1-208ENST00000485618 DCAF15Q66K64 600 aa9.94□□□□□ -0.82
SF3A1-208ENST00000485618 CASC1Q6TDU7 716 aa9.94□□□□□ -0.82
SF3A1-208ENST00000485618 ARMC9Q7Z3E5 817 aa9.94□□□□□ -0.82
SF3A1-208ENST00000485618 RUFY2Q8WXA3 655 aa9.94□□□□□ -0.82
SF3A1-208ENST00000485618 APPBP2Q92624 585 aa9.94□□□□□ -0.82
SF3A1-208ENST00000485618 TRIM34Q9BYJ4 488 aa9.94□□□□□ -0.82
SF3A1-208ENST00000485618 NACAP1Q9BZK3 213 aa9.94□□□□□ -0.82
SF3A1-208ENST00000485618 DIAPH3Q9NSV4 1193 aa9.94□□□□□ -0.82
SF3A1-208ENST00000485618 AATFQ9NY61 560 aaKnown RBP eCLIP9.94□□□□□ -0.82
SF3A1-208ENST00000485618 TAOK2Q9UL54 1235 aa9.94□□□□□ -0.82
SF3A1-208ENST00000485618 NDUFB9Q9Y6M9 179 aa9.94□□□□□ -0.82
SF3A1-208ENST00000485618 PAPPA2Q9BXP8 1791 aa9.93□□□□□ -0.82
SF3A1-208ENST00000485618 EIF5BO60841 1220 aaKnown RBP9.93□□□□□ -0.82
SF3A1-208ENST00000485618 TRPA1O75762 1119 aa9.93□□□□□ -0.82
SF3A1-208ENST00000485618 HLA-DOAP06340 250 aa9.93□□□□□ -0.82
SF3A1-208ENST00000485618 IREB2P48200 963 aaKnown RBP9.93□□□□□ -0.82
SF3A1-208ENST00000485618 SOX10P56693 466 aa9.93□□□□□ -0.82
SF3A1-208ENST00000485618 TTC22Q5TAA0 569 aa9.93□□□□□ -0.82
SF3A1-208ENST00000485618 TTC6Q86TZ1 520 aa9.93□□□□□ -0.82
SF3A1-208ENST00000485618 HELLSQ9NRZ9 838 aa9.93□□□□□ -0.82
SF3A1-208ENST00000485618 ATP8A2Q9NTI2 1148 aa9.93□□□□□ -0.82
SF3A1-208ENST00000485618 RNF186Q9NXI6 227 aa9.93□□□□□ -0.82
SF3A1-208ENST00000485618 AKAP11Q9UKA4 1901 aa9.93□□□□□ -0.82
SF3A1-208ENST00000485618 RFX7Q2KHR2 1363 aa9.92□□□□□ -0.82
SF3A1-208ENST00000485618 MYH2Q9UKX2 1941 aa9.92□□□□□ -0.82
SF3A1-208ENST00000485618 RGS3P49796 1198 aa9.92□□□□□ -0.82
SF3A1-208ENST00000485618 TCP10Q12799 353 aa9.92□□□□□ -0.82
SF3A1-208ENST00000485618 MCMDC2Q4G0Z9 681 aa9.92□□□□□ -0.82
SF3A1-208ENST00000485618 RASAL3Q86YV0 1011 aa9.92□□□□□ -0.82
SF3A1-208ENST00000485618 MIGA1Q8NAN2 632 aa9.92□□□□□ -0.82
SF3A1-208ENST00000485618 SH3RF3Q8TEJ3 882 aaPredicted RBP9.92□□□□□ -0.82
SF3A1-208ENST00000485618 EDC3Q96F86 508 aaKnown RBP9.92□□□□□ -0.82
SF3A1-208ENST00000485618 PI4KBQ9UBF8 816 aa9.92□□□□□ -0.82
SF3A1-208ENST00000485618 RPAP1Q9BWH6 1393 aaPredicted RBP9.91□□□□□ -0.82
SF3A1-208ENST00000485618 TCRBV5S4A2TA0A5A2 114 aa9.91□□□□□ -0.82
SF3A1-208ENST00000485618 WDHD1O75717 1129 aaPredicted RBP9.91□□□□□ -0.82
SF3A1-208ENST00000485618 MBD4O95243 580 aa9.91□□□□□ -0.82
SF3A1-208ENST00000485618 APPP05067 770 aa9.91□□□□□ -0.82
SF3A1-208ENST00000485618 SLC3A2P08195 630 aaKnown RBP9.91□□□□□ -0.82
SF3A1-208ENST00000485618 RHBDL3P58872 404 aa9.91□□□□□ -0.82
SF3A1-208ENST00000485618 PICALMQ13492 652 aa9.91□□□□□ -0.82
SF3A1-208ENST00000485618 GIMAP6Q6P9H5 292 aa9.91□□□□□ -0.82
SF3A1-208ENST00000485618 FOXP4Q8IVH2 680 aaPredicted RBP9.91□□□□□ -0.82
SF3A1-208ENST00000485618 ZNF384Q8TF68 577 aa9.91□□□□□ -0.82
SF3A1-208ENST00000485618 TGFBRAP1Q8WUH2 860 aa9.91□□□□□ -0.82
SF3A1-208ENST00000485618 CSRNP1Q96S65 589 aa9.91□□□□□ -0.82
SF3A1-208ENST00000485618 ZNF287Q9HBT7 754 aa9.91□□□□□ -0.82
SF3A1-208ENST00000485618 PCDHAC2Q9Y5I4 1007 aa9.91□□□□□ -0.82
SF3A1-208ENST00000485618 SLC4A4Q9Y6R1 1079 aa9.91□□□□□ -0.82
SF3A1-208ENST00000485618 POLR2AP24928 1970 aaKnown RBP9.9□□□□□ -0.82
SF3A1-208ENST00000485618 PATL2C9JE40 543 aaKnown RBP9.9□□□□□ -0.82
SF3A1-208ENST00000485618 POLR3DP05423 398 aaPredicted RBP9.9□□□□□ -0.82
SF3A1-208ENST00000485618 SDSP20132 328 aa9.9□□□□□ -0.82
SF3A1-208ENST00000485618 PDE4AP27815 886 aa9.9□□□□□ -0.82
SF3A1-208ENST00000485618 CACNB3P54284 484 aa9.9□□□□□ -0.82
SF3A1-208ENST00000485618 BMP2KLQ5H9B9 411 aa9.9□□□□□ -0.82
SF3A1-208ENST00000485618 CRACR2BQ8N4Y2 399 aaPredicted RBP9.9□□□□□ -0.82
SF3A1-208ENST00000485618 ZNF341Q9BYN7 854 aa9.9□□□□□ -0.82
SF3A1-208ENST00000485618 TMEM39BQ9GZU3 492 aa9.9□□□□□ -0.82
SF3A1-208ENST00000485618 OSBPL5Q9H0X9 879 aaPredicted RBP9.9□□□□□ -0.82
SF3A1-208ENST00000485618 HERC5Q9UII4 1024 aaKnown RBP9.9□□□□□ -0.82
SF3A1-208ENST00000485618 CSADQ9Y600 493 aa9.9□□□□□ -0.82
SF3A1-208ENST00000485618 TBC1D12O60347 775 aa9.89□□□□□ -0.83
SF3A1-208ENST00000485618 DYNLL1P63167 89 aaKnown RBP9.89□□□□□ -0.83
SF3A1-208ENST00000485618 NFIAQ12857 509 aa9.89□□□□□ -0.83
SF3A1-208ENST00000485618 ZMYM1Q5SVZ6 1142 aa9.89□□□□□ -0.83
SF3A1-208ENST00000485618 NBPF12Q5TAG4 269 aaPredicted RBP9.89□□□□□ -0.83
SF3A1-208ENST00000485618 KIAA1211Q6ZU35 1233 aa9.89□□□□□ -0.83
SF3A1-208ENST00000485618 CTU1Q7Z7A3 348 aaKnown RBP9.89□□□□□ -0.83
SF3A1-208ENST00000485618 ADGRA1Q86SQ6 560 aa9.89□□□□□ -0.83
SF3A1-208ENST00000485618 MAPKAPK5Q8IW41 473 aa9.89□□□□□ -0.83
SF3A1-208ENST00000485618 REM2Q8IYK8 340 aaPredicted RBP9.89□□□□□ -0.83
SF3A1-208ENST00000485618 STRBPQ96SI9 672 aaKnown RBP9.89□□□□□ -0.83
SF3A1-208ENST00000485618 RIOK1Q9BRS2 568 aaKnown RBP9.89□□□□□ -0.83
SF3A1-208ENST00000485618 ARMT1Q9H993 441 aa9.89□□□□□ -0.83
SF3A1-208ENST00000485618 MCM9Q9NXL9 1143 aa9.89□□□□□ -0.83
SF3A1-208ENST00000485618 FAM198AQ9UFP1 575 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms