RNA–Protein interactions for RNA: ENST00000484873.6

CAPN8-210, Transcript of calpain 8, humanhuman

TSL 3

Gene CAPN8, Length 364 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-210ENST00000484873 GRXCR1A8MXD5 290 aa4.96□□□□□ -1.62
CAPN8-210ENST00000484873 STK25O00506 426 aa4.96□□□□□ -1.62
CAPN8-210ENST00000484873 RIOK3O14730 519 aaKnown RBP4.96□□□□□ -1.62
CAPN8-210ENST00000484873 MSCO60682 206 aa4.96□□□□□ -1.62
CAPN8-210ENST00000484873 HMOX1P09601 288 aa4.96□□□□□ -1.62
CAPN8-210ENST00000484873 MYL6BP14649 208 aa4.96□□□□□ -1.62
CAPN8-210ENST00000484873 RAG1P15918 1043 aa4.96□□□□□ -1.62
CAPN8-210ENST00000484873 TNNI2P48788 182 aa4.96□□□□□ -1.62
CAPN8-210ENST00000484873 PUM1Q14671 1186 aaKnown RBP eCLIP4.96□□□□□ -1.62
CAPN8-210ENST00000484873 SNX17Q15036 470 aa4.96□□□□□ -1.62
CAPN8-210ENST00000484873 FAM110CQ1W6H9 321 aa4.96□□□□□ -1.62
CAPN8-210ENST00000484873 CFAP100Q494V2 611 aa4.96□□□□□ -1.62
CAPN8-210ENST00000484873 TRIM60Q495X7 471 aa4.96□□□□□ -1.62
CAPN8-210ENST00000484873 C1orf53Q5VUE5 145 aa4.96□□□□□ -1.62
CAPN8-210ENST00000484873 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.96□□□□□ -1.62
CAPN8-210ENST00000484873 FASTKD5Q7L8L6 764 aaKnown RBP4.96□□□□□ -1.62
CAPN8-210ENST00000484873 BMP8AQ7Z5Y6 402 aa4.96□□□□□ -1.62
CAPN8-210ENST00000484873 SH3RF1Q7Z6J0 888 aa4.96□□□□□ -1.62
CAPN8-210ENST00000484873 SUGP1Q8IWZ8 645 aaKnown RBP4.96□□□□□ -1.62
CAPN8-210ENST00000484873 ANKRD13CQ8N6S4 541 aa4.96□□□□□ -1.62
CAPN8-210ENST00000484873 GAS2L2Q8NHY3 880 aa4.96□□□□□ -1.62
CAPN8-210ENST00000484873 PRMT6Q96LA8 375 aaPredicted RBP4.96□□□□□ -1.62
CAPN8-210ENST00000484873 TEPSINQ96N21 525 aa4.96□□□□□ -1.62
CAPN8-210ENST00000484873 UPF3BQ9BZI7 483 aaKnown RBP4.96□□□□□ -1.62
CAPN8-210ENST00000484873 NKX2-4Q9H2Z4 354 aa4.96□□□□□ -1.62
CAPN8-210ENST00000484873 SH2B1Q9NRF2 756 aaPredicted RBP4.96□□□□□ -1.62
CAPN8-210ENST00000484873 SLC45A1Q9Y2W3 748 aa4.96□□□□□ -1.62
CAPN8-210ENST00000484873 RRP7AQ9Y3A4 280 aaKnown RBP4.96□□□□□ -1.62
CAPN8-210ENST00000484873 MTCH2Q9Y6C9 303 aa4.96□□□□□ -1.62
CAPN8-210ENST00000484873 WDFY4Q6ZS81 3184 aa4.96□□□□□ -1.62
CAPN8-210ENST00000484873 ZFHX2Q9C0A1 2572 aaPredicted RBP4.96□□□□□ -1.62
CAPN8-210ENST00000484873 GAKO14976 1311 aa4.96□□□□□ -1.62
CAPN8-210ENST00000484873 COL4A1P02462 1669 aa4.96□□□□□ -1.62
CAPN8-210ENST00000484873 MGAMO43451 1857 aa4.95□□□□□ -1.62
CAPN8-210ENST00000484873 CLTBP09497 229 aa4.95□□□□□ -1.62
CAPN8-210ENST00000484873 XRCC5P13010 732 aaKnown RBP4.95□□□□□ -1.62
CAPN8-210ENST00000484873 ZKSCAN1P17029 563 aaPredicted RBP4.95□□□□□ -1.62
CAPN8-210ENST00000484873 CCND3P30281 292 aaPredicted RBP4.95□□□□□ -1.62
CAPN8-210ENST00000484873 RBM5P52756 815 aaKnown RBP eCLIP4.95□□□□□ -1.62
CAPN8-210ENST00000484873 CACNB2Q08289 660 aaPredicted RBP4.95□□□□□ -1.62
CAPN8-210ENST00000484873 MOGSQ13724 837 aa4.95□□□□□ -1.62
CAPN8-210ENST00000484873 GSE1Q14687 1217 aa4.95□□□□□ -1.62
CAPN8-210ENST00000484873 EPHA10Q5JZY3 1008 aa4.95□□□□□ -1.62
CAPN8-210ENST00000484873 PPP2R2DQ66LE6 453 aa4.95□□□□□ -1.62
CAPN8-210ENST00000484873 GPAT2Q6NUI2 795 aa4.95□□□□□ -1.62
CAPN8-210ENST00000484873 NLRP10Q86W26 655 aa4.95□□□□□ -1.62
CAPN8-210ENST00000484873 KCNV2Q8TDN2 545 aa4.95□□□□□ -1.62
CAPN8-210ENST00000484873 LPAR1Q92633 364 aa4.95□□□□□ -1.62
CAPN8-210ENST00000484873 RMDN1Q96DB5 314 aa4.95□□□□□ -1.62
CAPN8-210ENST00000484873 GJD2Q9UKL4 321 aa4.95□□□□□ -1.62
CAPN8-210ENST00000484873 RALYQ9UKM9 306 aaKnown RBP4.95□□□□□ -1.62
CAPN8-210ENST00000484873 JAG2Q9Y219 1238 aa4.95□□□□□ -1.62
CAPN8-210ENST00000484873 ZNF318Q5VUA4 2279 aa4.95□□□□□ -1.62
CAPN8-210ENST00000484873 DCHS1Q96JQ0 3298 aa4.94□□□□□ -1.62
CAPN8-210ENST00000484873 PTPRZ1P23471 2315 aaPredicted RBP4.94□□□□□ -1.62
CAPN8-210ENST00000484873 KBTBD13C9JR72 458 aa4.94□□□□□ -1.62
CAPN8-210ENST00000484873 CXCL11O14625 94 aa4.94□□□□□ -1.62
CAPN8-210ENST00000484873 KIAA0355O15063 1070 aa4.94□□□□□ -1.62
CAPN8-210ENST00000484873 SLC5A1P13866 664 aa4.94□□□□□ -1.62
CAPN8-210ENST00000484873 DSG3P32926 999 aa4.94□□□□□ -1.62
CAPN8-210ENST00000484873 IRS1P35568 1242 aa4.94□□□□□ -1.62
CAPN8-210ENST00000484873 GTF2IP78347 998 aa4.94□□□□□ -1.62
CAPN8-210ENST00000484873 NBPF20Q3BBV1 942 aa4.94□□□□□ -1.62
CAPN8-210ENST00000484873 PUS10Q3MIT2 529 aaKnown RBP4.94□□□□□ -1.62
CAPN8-210ENST00000484873 LEXMQ3ZCV2 418 aa4.94□□□□□ -1.62
CAPN8-210ENST00000484873 RASIP1Q5U651 963 aa4.94□□□□□ -1.62
CAPN8-210ENST00000484873 DCAF15Q66K64 600 aa4.94□□□□□ -1.62
CAPN8-210ENST00000484873 CDAN1Q8IWY9 1227 aa4.94□□□□□ -1.62
CAPN8-210ENST00000484873 ADSSL1Q8N142 457 aa4.94□□□□□ -1.62
CAPN8-210ENST00000484873 ARRDC4Q8NCT1 418 aa4.94□□□□□ -1.62
CAPN8-210ENST00000484873 SOCS4Q8WXH5 440 aa4.94□□□□□ -1.62
CAPN8-210ENST00000484873 PBXIP1Q96AQ6 731 aa4.94□□□□□ -1.62
CAPN8-210ENST00000484873 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.94□□□□□ -1.62
CAPN8-210ENST00000484873 FSD1Q9BTV5 496 aa4.94□□□□□ -1.62
CAPN8-210ENST00000484873 TMEM39BQ9GZU3 492 aa4.94□□□□□ -1.62
CAPN8-210ENST00000484873 MTIF3Q9H2K0 278 aaKnown RBP4.94□□□□□ -1.62
CAPN8-210ENST00000484873 PCDHAC2Q9Y5I4 1007 aa4.94□□□□□ -1.62
CAPN8-210ENST00000484873 ZNF521Q96K83 1311 aa4.94□□□□□ -1.62
CAPN8-210ENST00000484873 SIPA1L3O60292 1781 aaPredicted RBP4.93□□□□□ -1.62
CAPN8-210ENST00000484873 CHD6Q8TD26 2715 aa4.93□□□□□ -1.62
CAPN8-210ENST00000484873 SOBPA7XYQ1 873 aa4.93□□□□□ -1.62
CAPN8-210ENST00000484873 HOXB3P14651 431 aaPredicted RBP4.93□□□□□ -1.62
CAPN8-210ENST00000484873 CYP2B6P20813 491 aa4.93□□□□□ -1.62
CAPN8-210ENST00000484873 NBL1P41271 181 aa4.93□□□□□ -1.62
CAPN8-210ENST00000484873 NUBP1P53384 320 aa4.93□□□□□ -1.62
CAPN8-210ENST00000484873 PPIGQ13427 754 aaKnown RBP eCLIP4.93□□□□□ -1.62
CAPN8-210ENST00000484873 MCTP2Q6DN12 878 aa4.93□□□□□ -1.62
CAPN8-210ENST00000484873 PSRC1Q6PGN9 363 aaPredicted RBP4.93□□□□□ -1.62
CAPN8-210ENST00000484873 NKD2Q969F2 451 aaPredicted RBP4.93□□□□□ -1.62
CAPN8-210ENST00000484873 NUDT12Q9BQG2 462 aa4.93□□□□□ -1.62
CAPN8-210ENST00000484873 BSDC1Q9NW68 430 aaPredicted RBP4.93□□□□□ -1.62
CAPN8-210ENST00000484873 ZNF70Q9UC06 446 aaPredicted RBP4.93□□□□□ -1.62
CAPN8-210ENST00000484873 DDX20Q9UHI6 824 aaKnown RBP4.93□□□□□ -1.62
CAPN8-210ENST00000484873 PNMA3Q9UL41 463 aa4.93□□□□□ -1.62
CAPN8-210ENST00000484873 YBX2Q9Y2T7 364 aaKnown RBP4.93□□□□□ -1.62
CAPN8-210ENST00000484873 AOX1Q06278 1338 aa4.93□□□□□ -1.62
CAPN8-210ENST00000484873 CFAP47Q6ZTR5 3102 aa4.92□□□□□ -1.62
CAPN8-210ENST00000484873 A0A0G2JMZ2 1700 aa4.92□□□□□ -1.62
CAPN8-210ENST00000484873 A0A0G2JLL6 359 aaPredicted RBP4.92□□□□□ -1.62
CAPN8-210ENST00000484873 TCP10L2B9ZVM9 353 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms