RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 ANKRD2Q9GZV1 360 aa6.46□□□□□ -1.38
COL17A1-206ENST00000483876 SEC31BQ9NQW1 1179 aa6.46□□□□□ -1.38
COL17A1-206ENST00000483876 GNL3LQ9NVN8 582 aaKnown RBP6.46□□□□□ -1.38
COL17A1-206ENST00000483876 CTNNA3Q9UI47 895 aa6.46□□□□□ -1.38
COL17A1-206ENST00000483876 LIMCH1Q9UPQ0 1083 aa6.46□□□□□ -1.38
COL17A1-206ENST00000483876 MYH3P11055 1940 aa6.46□□□□□ -1.38
COL17A1-206ENST00000483876 AK9Q5TCS8 1911 aa6.46□□□□□ -1.38
COL17A1-206ENST00000483876 SHTN1A0MZ66 631 aa6.45□□□□□ -1.38
COL17A1-206ENST00000483876 KLRG2A4D1S0 409 aaPredicted RBP6.45□□□□□ -1.38
COL17A1-206ENST00000483876 SLC27A2O14975 620 aa6.45□□□□□ -1.38
COL17A1-206ENST00000483876 SEMA3EO15041 775 aa6.45□□□□□ -1.38
COL17A1-206ENST00000483876 PPIP5K2O43314 1243 aa6.45□□□□□ -1.38
COL17A1-206ENST00000483876 PTMSP20962 102 aa6.45□□□□□ -1.38
COL17A1-206ENST00000483876 ADORA1P30542 326 aa6.45□□□□□ -1.38
COL17A1-206ENST00000483876 KCNJ4P48050 445 aa6.45□□□□□ -1.38
COL17A1-206ENST00000483876 CHRNDQ07001 517 aa6.45□□□□□ -1.38
COL17A1-206ENST00000483876 RAB3GAP1Q15042 981 aa6.45□□□□□ -1.38
COL17A1-206ENST00000483876 ANKRD1Q15327 319 aa6.45□□□□□ -1.38
COL17A1-206ENST00000483876 CC2D2BQ6DHV5 1058 aa6.45□□□□□ -1.38
COL17A1-206ENST00000483876 DDX46Q7L014 1031 aaKnown RBP6.45□□□□□ -1.38
COL17A1-206ENST00000483876 RUFY3Q7L099 469 aa6.45□□□□□ -1.38
COL17A1-206ENST00000483876 UBE2Q1Q7Z7E8 422 aa6.45□□□□□ -1.38
COL17A1-206ENST00000483876 SULF1Q8IWU6 871 aa6.45□□□□□ -1.38
COL17A1-206ENST00000483876 MICALL2Q8IY33 904 aa6.45□□□□□ -1.38
COL17A1-206ENST00000483876 FBXL16Q8N461 479 aa6.45□□□□□ -1.38
COL17A1-206ENST00000483876 SPATA5Q8NB90 893 aa6.45□□□□□ -1.38
COL17A1-206ENST00000483876 NKX2-3Q8TAU0 364 aa6.45□□□□□ -1.38
COL17A1-206ENST00000483876 APPBP2Q92624 585 aa6.45□□□□□ -1.38
COL17A1-206ENST00000483876 CHMP4CQ96CF2 233 aa6.45□□□□□ -1.38
COL17A1-206ENST00000483876 EDC3Q96F86 508 aaKnown RBP6.45□□□□□ -1.38
COL17A1-206ENST00000483876 CDCA5Q96FF9 252 aa6.45□□□□□ -1.38
COL17A1-206ENST00000483876 TMX3Q96JJ7 454 aa6.45□□□□□ -1.38
COL17A1-206ENST00000483876 SLKQ9H2G2 1235 aaPredicted RBP6.45□□□□□ -1.38
COL17A1-206ENST00000483876 SH2B1Q9NRF2 756 aaPredicted RBP6.45□□□□□ -1.38
COL17A1-206ENST00000483876 ZNRF3Q9ULT6 936 aa6.45□□□□□ -1.38
COL17A1-206ENST00000483876 MINPP1Q9UNW1 487 aa6.45□□□□□ -1.38
COL17A1-206ENST00000483876 RBM8AQ9Y5S9 174 aaKnown RBP6.45□□□□□ -1.38
COL17A1-206ENST00000483876 CYP46A1Q9Y6A2 500 aa6.45□□□□□ -1.38
COL17A1-206ENST00000483876 PTCH2Q9Y6C5 1203 aa6.45□□□□□ -1.38
COL17A1-206ENST00000483876 PDS5AQ29RF7 1337 aaKnown RBP6.45□□□□□ -1.38
COL17A1-206ENST00000483876 SNED1Q8TER0 1413 aa6.44□□□□□ -1.38
COL17A1-206ENST00000483876 FAM177BA6PVY3 158 aa6.44□□□□□ -1.38
COL17A1-206ENST00000483876 BBOX1O75936 387 aa6.44□□□□□ -1.38
COL17A1-206ENST00000483876 CYP2E1P05181 493 aaPredicted RBP6.44□□□□□ -1.38
COL17A1-206ENST00000483876 HSPD1P10809 573 aaKnown RBP6.44□□□□□ -1.38
COL17A1-206ENST00000483876 HOXA10P31260 410 aaPredicted RBP6.44□□□□□ -1.38
COL17A1-206ENST00000483876 MCAMP43121 646 aa6.44□□□□□ -1.38
COL17A1-206ENST00000483876 ZAP70P43403 619 aa6.44□□□□□ -1.38
COL17A1-206ENST00000483876 AOC3Q16853 763 aa6.44□□□□□ -1.38
COL17A1-206ENST00000483876 CRY2Q49AN0 593 aa6.44□□□□□ -1.38
COL17A1-206ENST00000483876 TBC1D10BQ4KMP7 808 aaPredicted RBP6.44□□□□□ -1.38
COL17A1-206ENST00000483876 CAVIN4Q5BKX8 364 aa6.44□□□□□ -1.38
COL17A1-206ENST00000483876 C15orf52Q6ZUT6 534 aaKnown RBP6.44□□□□□ -1.38
COL17A1-206ENST00000483876 TMC4Q7Z404 712 aa6.44□□□□□ -1.38
COL17A1-206ENST00000483876 FBXO33Q7Z6M2 555 aa6.44□□□□□ -1.38
COL17A1-206ENST00000483876 ZNF589Q86UQ0 364 aaPredicted RBP6.44□□□□□ -1.38
COL17A1-206ENST00000483876 SH3TC2Q8TF17 1288 aa6.44□□□□□ -1.38
COL17A1-206ENST00000483876 CDX2Q99626 313 aaPredicted RBP6.44□□□□□ -1.38
COL17A1-206ENST00000483876 PDRG1Q9NUG6 133 aa6.44□□□□□ -1.38
COL17A1-206ENST00000483876 LEMD3Q9Y2U8 911 aa6.44□□□□□ -1.38
COL17A1-206ENST00000483876 PIEZO1Q92508 2521 aa6.44□□□□□ -1.38
COL17A1-206ENST00000483876 ZNF804BA4D1E1 1349 aa6.44□□□□□ -1.38
COL17A1-206ENST00000483876 LAMB2P55268 1798 aa6.44□□□□□ -1.38
COL17A1-206ENST00000483876 SCN7AQ01118 1682 aa6.43□□□□□ -1.38
COL17A1-206ENST00000483876 DDX60Q8IY21 1712 aaKnown RBP6.43□□□□□ -1.38
COL17A1-206ENST00000483876 UBE2Q2LH0YL09 131 aa6.43□□□□□ -1.38
COL17A1-206ENST00000483876 RAD17O75943 681 aa6.43□□□□□ -1.38
COL17A1-206ENST00000483876 ECM2O94769 699 aaPredicted RBP6.43□□□□□ -1.38
COL17A1-206ENST00000483876 GNAT2P19087 354 aa6.43□□□□□ -1.38
COL17A1-206ENST00000483876 CASTP20810 708 aaKnown RBP6.43□□□□□ -1.38
COL17A1-206ENST00000483876 RPS6KB1P23443 525 aa6.43□□□□□ -1.38
COL17A1-206ENST00000483876 ADD2P35612 726 aa6.43□□□□□ -1.38
COL17A1-206ENST00000483876 PHKA1P46020 1223 aa6.43□□□□□ -1.38
COL17A1-206ENST00000483876 SP3Q02447 781 aa6.43□□□□□ -1.38
COL17A1-206ENST00000483876 SCARF1Q14162 830 aa6.43□□□□□ -1.38
COL17A1-206ENST00000483876 TNIP1Q15025 636 aa6.43□□□□□ -1.38
COL17A1-206ENST00000483876 ARHGEF6Q15052 776 aa6.43□□□□□ -1.38
COL17A1-206ENST00000483876 ALX1Q15699 326 aa6.43□□□□□ -1.38
COL17A1-206ENST00000483876 GRIPAP1Q4V328 841 aa6.43□□□□□ -1.38
COL17A1-206ENST00000483876 SLC9C2Q5TAH2 1124 aa6.43□□□□□ -1.38
COL17A1-206ENST00000483876 ZNF697Q5TEC3 545 aa6.43□□□□□ -1.38
COL17A1-206ENST00000483876 BLOC1S2Q6QNY1 142 aa6.43□□□□□ -1.38
COL17A1-206ENST00000483876 C3orf67Q6ZVT6 689 aa6.43□□□□□ -1.38
COL17A1-206ENST00000483876 MOB2Q70IA6 237 aa6.43□□□□□ -1.38
COL17A1-206ENST00000483876 HELBQ8NG08 1087 aaPredicted RBP6.43□□□□□ -1.38
COL17A1-206ENST00000483876 OSBP2Q969R2 916 aa6.43□□□□□ -1.38
COL17A1-206ENST00000483876 JAKMIP1Q96N16 626 aaKnown RBP6.43□□□□□ -1.38
COL17A1-206ENST00000483876 NEK1Q96PY6 1258 aa6.43□□□□□ -1.38
COL17A1-206ENST00000483876 CRAMP1Q96RY5 1269 aa6.43□□□□□ -1.38
COL17A1-206ENST00000483876 DENND2AQ9ULE3 1009 aa6.43□□□□□ -1.38
COL17A1-206ENST00000483876 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.43□□□□□ -1.38
COL17A1-206ENST00000483876 RPAP1Q9BWH6 1393 aaPredicted RBP6.43□□□□□ -1.38
COL17A1-206ENST00000483876 TCRBV5S4A2TA0A5A2 114 aa6.42□□□□□ -1.38
COL17A1-206ENST00000483876 FRAT2O75474 233 aaPredicted RBP6.42□□□□□ -1.38
COL17A1-206ENST00000483876 CYP21A2P08686 494 aa6.42□□□□□ -1.38
COL17A1-206ENST00000483876 MCM4P33991 863 aa6.42□□□□□ -1.38
COL17A1-206ENST00000483876 AK2P54819 239 aa6.42□□□□□ -1.38
COL17A1-206ENST00000483876 FOXK2Q01167 660 aa6.42□□□□□ -1.38
COL17A1-206ENST00000483876 CAP1Q01518 475 aa6.42□□□□□ -1.38
COL17A1-206ENST00000483876 EXOSC10Q01780 885 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms