RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 ZNRF3Q9ULT6 936 aa11.97□□□□□ -0.49
HDAC6-226ENST00000483656 PCDHAC2Q9Y5I4 1007 aa11.97□□□□□ -0.49
HDAC6-226ENST00000483656 ADAMTSL1Q8N6G6 1762 aa11.97□□□□□ -0.49
HDAC6-226ENST00000483656 BAZ2AQ9UIF9 1905 aaKnown RBP11.96□□□□□ -0.49
HDAC6-226ENST00000483656 ARFGEF1Q9Y6D6 1849 aa11.96□□□□□ -0.49
HDAC6-226ENST00000483656 MINDY4BA8MYZ0 360 aa11.96□□□□□ -0.49
HDAC6-226ENST00000483656 PSMD14O00487 310 aa11.96□□□□□ -0.49
HDAC6-226ENST00000483656 RAD17O75943 681 aa11.96□□□□□ -0.49
HDAC6-226ENST00000483656 FGRP09769 529 aa11.96□□□□□ -0.49
HDAC6-226ENST00000483656 USP17L8P0C7I0 530 aa11.96□□□□□ -0.49
HDAC6-226ENST00000483656 CRKP46108 304 aa11.96□□□□□ -0.49
HDAC6-226ENST00000483656 HDLBPQ00341 1268 aaKnown RBP11.96□□□□□ -0.49
HDAC6-226ENST00000483656 RASSF7Q02833 373 aa11.96□□□□□ -0.49
HDAC6-226ENST00000483656 ME3Q16798 604 aa11.96□□□□□ -0.49
HDAC6-226ENST00000483656 CERS3Q8IU89 383 aa11.96□□□□□ -0.49
HDAC6-226ENST00000483656 KIAA0825Q8IV33 1275 aa11.96□□□□□ -0.49
HDAC6-226ENST00000483656 TEX11Q8IYF3 940 aa11.96□□□□□ -0.49
HDAC6-226ENST00000483656 FBXL16Q8N461 479 aa11.96□□□□□ -0.49
HDAC6-226ENST00000483656 TGFBRAP1Q8WUH2 860 aa11.96□□□□□ -0.49
HDAC6-226ENST00000483656 GPHNQ9NQX3 736 aaPredicted RBP11.96□□□□□ -0.49
HDAC6-226ENST00000483656 WDR19Q8NEZ3 1342 aa11.95□□□□□ -0.5
HDAC6-226ENST00000483656 B4E1Z4 1266 aa11.95□□□□□ -0.5
HDAC6-226ENST00000483656 PRC1O43663 620 aa11.95□□□□□ -0.5
HDAC6-226ENST00000483656 PLCG2P16885 1265 aa11.95□□□□□ -0.5
HDAC6-226ENST00000483656 USP5P45974 858 aa11.95□□□□□ -0.5
HDAC6-226ENST00000483656 CXCL9Q07325 125 aa11.95□□□□□ -0.5
HDAC6-226ENST00000483656 ANKRD1Q15327 319 aa11.95□□□□□ -0.5
HDAC6-226ENST00000483656 CDC42EP5Q6NZY7 148 aa11.95□□□□□ -0.5
HDAC6-226ENST00000483656 RSBN1LQ6PCB5 846 aaPredicted RBP11.95□□□□□ -0.5
HDAC6-226ENST00000483656 MAPKAPK5Q8IW41 473 aa11.95□□□□□ -0.5
HDAC6-226ENST00000483656 NIM1KQ8IY84 436 aa11.95□□□□□ -0.5
HDAC6-226ENST00000483656 TEKT1Q969V4 418 aa11.95□□□□□ -0.5
HDAC6-226ENST00000483656 ZSCAN31Q96LW9 406 aaPredicted RBP11.95□□□□□ -0.5
HDAC6-226ENST00000483656 ZDHHC15Q96MV8 337 aa11.95□□□□□ -0.5
HDAC6-226ENST00000483656 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.95□□□□□ -0.5
HDAC6-226ENST00000483656 CDK5RAP2Q96SN8 1893 aa11.95□□□□□ -0.5
HDAC6-226ENST00000483656 WDHD1O75717 1129 aaPredicted RBP11.94□□□□□ -0.5
HDAC6-226ENST00000483656 MCM5P33992 734 aa11.94□□□□□ -0.5
HDAC6-226ENST00000483656 C12orf60Q5U649 245 aa11.94□□□□□ -0.5
HDAC6-226ENST00000483656 MFSD6Q6ZSS7 791 aa11.94□□□□□ -0.5
HDAC6-226ENST00000483656 RALYLQ86SE5 291 aaKnown RBP11.94□□□□□ -0.5
HDAC6-226ENST00000483656 STK11IPQ8N1F8 1099 aa11.94□□□□□ -0.5
HDAC6-226ENST00000483656 NECAB1Q8N987 351 aa11.94□□□□□ -0.5
HDAC6-226ENST00000483656 BRF1Q92994 677 aa11.94□□□□□ -0.5
HDAC6-226ENST00000483656 INTS4Q96HW7 963 aaKnown RBP11.94□□□□□ -0.5
HDAC6-226ENST00000483656 USP40Q9NVE5 1235 aa11.94□□□□□ -0.5
HDAC6-226ENST00000483656 MCM9Q9NXL9 1143 aa11.94□□□□□ -0.5
HDAC6-226ENST00000483656 ARPP21Q9UBL0 812 aaPredicted RBP11.94□□□□□ -0.5
HDAC6-226ENST00000483656 SERPINA10Q9UK55 444 aa11.94□□□□□ -0.5
HDAC6-226ENST00000483656 DDX60LQ5H9U9 1706 aaKnown RBP11.94□□□□□ -0.5
HDAC6-226ENST00000483656 FLT1P17948 1338 aa11.93□□□□□ -0.5
HDAC6-226ENST00000483656 KDM4AO75164 1064 aa11.93□□□□□ -0.5
HDAC6-226ENST00000483656 EVCP57679 992 aa11.93□□□□□ -0.5
HDAC6-226ENST00000483656 APOBRQ0VD83 1088 aa11.93□□□□□ -0.5
HDAC6-226ENST00000483656 TRDNQ13061 729 aa11.93□□□□□ -0.5
HDAC6-226ENST00000483656 IGDCC4Q8TDY8 1250 aa11.93□□□□□ -0.5
HDAC6-226ENST00000483656 SYT17Q9BSW7 474 aa11.93□□□□□ -0.5
HDAC6-226ENST00000483656 KRT23Q9C075 422 aa11.93□□□□□ -0.5
HDAC6-226ENST00000483656 RNF41Q9H4P4 317 aaPredicted RBP11.93□□□□□ -0.5
HDAC6-226ENST00000483656 CNNM2Q9H8M5 875 aa11.93□□□□□ -0.5
HDAC6-226ENST00000483656 DDX4Q9NQI0 724 aaKnown RBP11.93□□□□□ -0.5
HDAC6-226ENST00000483656 SH2B1Q9NRF2 756 aaPredicted RBP11.93□□□□□ -0.5
HDAC6-226ENST00000483656 ZSWIM5Q9P217 1185 aa11.93□□□□□ -0.5
HDAC6-226ENST00000483656 SAP30BPQ9UHR5 308 aaKnown RBP11.93□□□□□ -0.5
HDAC6-226ENST00000483656 ZBTB12Q9Y330 459 aaPredicted RBP11.93□□□□□ -0.5
HDAC6-226ENST00000483656 LAMB1P07942 1786 aa11.92□□□□□ -0.5
HDAC6-226ENST00000483656 MYO3BQ8WXR4 1341 aa11.92□□□□□ -0.5
HDAC6-226ENST00000483656 NAV1Q8NEY1 1877 aa11.92□□□□□ -0.5
HDAC6-226ENST00000483656 SH2B2O14492 632 aaPredicted RBP11.92□□□□□ -0.5
HDAC6-226ENST00000483656 ORC4O43929 436 aa11.92□□□□□ -0.5
HDAC6-226ENST00000483656 HSP90AA1P07900 732 aaKnown RBP11.92□□□□□ -0.5
HDAC6-226ENST00000483656 PLCD1P51178 756 aa11.92□□□□□ -0.5
HDAC6-226ENST00000483656 CFAP100Q494V2 611 aa11.92□□□□□ -0.5
HDAC6-226ENST00000483656 CIAPIN1Q6FI81 312 aa11.92□□□□□ -0.5
HDAC6-226ENST00000483656 CCDC83Q8IWF9 413 aa11.92□□□□□ -0.5
HDAC6-226ENST00000483656 DYNLL2Q96FJ2 89 aa11.92□□□□□ -0.5
HDAC6-226ENST00000483656 SENP2Q9HC62 589 aa11.92□□□□□ -0.5
HDAC6-226ENST00000483656 CHMP5Q9NZZ3 219 aa11.92□□□□□ -0.5
HDAC6-226ENST00000483656 BRPF3Q9ULD4 1205 aa11.92□□□□□ -0.5
HDAC6-226ENST00000483656 FOCADQ5VW36 1801 aa11.92□□□□□ -0.5
HDAC6-226ENST00000483656 ROBO3Q96MS0 1386 aa11.92□□□□□ -0.5
HDAC6-226ENST00000483656 FZD9O00144 591 aa11.91□□□□□ -0.5
HDAC6-226ENST00000483656 PFKFB2O60825 505 aa11.91□□□□□ -0.5
HDAC6-226ENST00000483656 DTNBO60941 627 aa11.91□□□□□ -0.5
HDAC6-226ENST00000483656 PRDM1O75626 825 aa11.91□□□□□ -0.5
HDAC6-226ENST00000483656 PCP11498 1178 aaKnown RBP11.91□□□□□ -0.5
HDAC6-226ENST00000483656 PDIA3P30101 505 aaKnown RBP11.91□□□□□ -0.5
HDAC6-226ENST00000483656 NFIAQ12857 509 aa11.91□□□□□ -0.5
HDAC6-226ENST00000483656 SLC4A8Q2Y0W8 1093 aa11.91□□□□□ -0.5
HDAC6-226ENST00000483656 RRP12Q5JTH9 1297 aaKnown RBP11.91□□□□□ -0.5
HDAC6-226ENST00000483656 ZFPM1Q8IX07 1006 aa11.91□□□□□ -0.5
HDAC6-226ENST00000483656 AGBL3Q8NEM8 1001 aa11.91□□□□□ -0.5
HDAC6-226ENST00000483656 JDP2Q8WYK2 163 aa11.91□□□□□ -0.5
HDAC6-226ENST00000483656 TMEM87BQ96K49 555 aa11.91□□□□□ -0.5
HDAC6-226ENST00000483656 PRMT6Q96LA8 375 aaPredicted RBP11.91□□□□□ -0.5
HDAC6-226ENST00000483656 CWC22Q9HCG8 908 aaKnown RBP11.91□□□□□ -0.5
HDAC6-226ENST00000483656 CIZ1Q9ULV3 898 aaPredicted RBP11.91□□□□□ -0.5
HDAC6-226ENST00000483656 POLR3DP05423 398 aaPredicted RBP11.9□□□□□ -0.5
HDAC6-226ENST00000483656 CACNB3P54284 484 aa11.9□□□□□ -0.5
HDAC6-226ENST00000483656 FGD1P98174 961 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms