RNA–Protein interactions for RNA: ENST00000482693.1

SF1-215, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-215ENST00000482693 MAP3K11Q16584 847 aa20.2■□□□□ 0.82
SF1-215ENST00000482693 DCAF15Q66K64 600 aa20.2■□□□□ 0.82
SF1-215ENST00000482693 CRNKL1Q9BZJ0 848 aaKnown RBP20.2■□□□□ 0.82
SF1-215ENST00000482693 TRIM6-TRIM34B2RNG4 842 aa20.19■□□□□ 0.82
SF1-215ENST00000482693 IREB2P48200 963 aaKnown RBP20.19■□□□□ 0.82
SF1-215ENST00000482693 PRKG1Q13976 671 aa20.19■□□□□ 0.82
SF1-215ENST00000482693 SLFNL1Q499Z3 407 aa20.19■□□□□ 0.82
SF1-215ENST00000482693 ZSCAN29Q8IWY8 852 aaPredicted RBP20.19■□□□□ 0.82
SF1-215ENST00000482693 DNAJC5GQ8N7S2 189 aa20.19■□□□□ 0.82
SF1-215ENST00000482693 APPBP2Q92624 585 aa20.19■□□□□ 0.82
SF1-215ENST00000482693 OSBPL5Q9H0X9 879 aaPredicted RBP20.19■□□□□ 0.82
SF1-215ENST00000482693 DHX36Q9H2U1 1008 aaKnown RBP20.19■□□□□ 0.82
SF1-215ENST00000482693 ANGEL1Q9UNK9 670 aaKnown RBP20.19■□□□□ 0.82
SF1-215ENST00000482693 SSC5DA1L4H1 1573 aa20.18■□□□□ 0.82
SF1-215ENST00000482693 UBE2Q2LH0YL09 131 aa20.18■□□□□ 0.82
SF1-215ENST00000482693 USP2O75604 605 aaPredicted RBP20.18■□□□□ 0.82
SF1-215ENST00000482693 CHGBP05060 677 aa20.18■□□□□ 0.82
SF1-215ENST00000482693 USP5P45974 858 aa20.18■□□□□ 0.82
SF1-215ENST00000482693 LDLRAD1Q5T700 205 aa20.18■□□□□ 0.82
SF1-215ENST00000482693 MOB2Q70IA6 237 aa20.18■□□□□ 0.82
SF1-215ENST00000482693 SH3BP5LQ7L8J4 393 aa20.18■□□□□ 0.82
SF1-215ENST00000482693 MAPKAPK5Q8IW41 473 aa20.18■□□□□ 0.82
SF1-215ENST00000482693 AIDAQ96BJ3 306 aa20.18■□□□□ 0.82
SF1-215ENST00000482693 CSRNP1Q96S65 589 aa20.18■□□□□ 0.82
SF1-215ENST00000482693 FLT1P17948 1338 aa20.18■□□□□ 0.82
SF1-215ENST00000482693 ATRNL1Q5VV63 1379 aa20.18■□□□□ 0.82
SF1-215ENST00000482693 PAPPA2Q9BXP8 1791 aa20.18■□□□□ 0.82
SF1-215ENST00000482693 COL2A1P02458 1487 aaPredicted RBP20.18■□□□□ 0.82
SF1-215ENST00000482693 DDTLA6NHG4 134 aaPredicted RBP20.17■□□□□ 0.82
SF1-215ENST00000482693 MBD4O95243 580 aa20.17■□□□□ 0.82
SF1-215ENST00000482693 LCORLQ8N3X6 602 aa20.17■□□□□ 0.82
SF1-215ENST00000482693 RILPL2Q969X0 211 aa20.17■□□□□ 0.82
SF1-215ENST00000482693 PUS7LQ9H0K6 701 aaKnown RBP20.17■□□□□ 0.82
SF1-215ENST00000482693 ARMT1Q9H993 441 aa20.17■□□□□ 0.82
SF1-215ENST00000482693 MKRN1Q9UHC7 482 aaKnown RBP20.17■□□□□ 0.82
SF1-215ENST00000482693 ECE1P42892 770 aa20.16■□□□□ 0.82
SF1-215ENST00000482693 TTC22Q5TAA0 569 aa20.16■□□□□ 0.82
SF1-215ENST00000482693 RGMBQ6NW40 437 aa20.16■□□□□ 0.82
SF1-215ENST00000482693 OSBP2Q969R2 916 aa20.16■□□□□ 0.82
SF1-215ENST00000482693 CCDC102AQ96A19 550 aa20.16■□□□□ 0.82
SF1-215ENST00000482693 KLRG1Q96E93 195 aa20.16■□□□□ 0.82
SF1-215ENST00000482693 ZNF341Q9BYN7 854 aa20.16■□□□□ 0.82
SF1-215ENST00000482693 ZNF157P51786 506 aaPredicted RBP20.15■□□□□ 0.82
SF1-215ENST00000482693 MAP3K10Q02779 954 aa20.15■□□□□ 0.82
SF1-215ENST00000482693 ZMYM1Q5SVZ6 1142 aa20.15■□□□□ 0.82
SF1-215ENST00000482693 MIGA2Q7L4E1 593 aa20.15■□□□□ 0.82
SF1-215ENST00000482693 STRBPQ96SI9 672 aaKnown RBP20.15■□□□□ 0.82
SF1-215ENST00000482693 ATP8A2Q9NTI2 1148 aa20.15■□□□□ 0.82
SF1-215ENST00000482693 PI4KBQ9UBF8 816 aa20.15■□□□□ 0.82
SF1-215ENST00000482693 FZD1Q9UP38 647 aa20.15■□□□□ 0.82
SF1-215ENST00000482693 TBC1D12O60347 775 aa20.14■□□□□ 0.81
SF1-215ENST00000482693 VEGFBP49765 207 aa20.14■□□□□ 0.81
SF1-215ENST00000482693 MAP3K9P80192 1104 aa20.14■□□□□ 0.81
SF1-215ENST00000482693 PAXIP1Q6ZW49 1069 aaPredicted RBP20.14■□□□□ 0.81
SF1-215ENST00000482693 ANKRD13AQ8IZ07 590 aa20.14■□□□□ 0.81
SF1-215ENST00000482693 CAPNS2Q96L46 248 aa20.14■□□□□ 0.81
SF1-215ENST00000482693 GNAT2P19087 354 aa20.13■□□□□ 0.81
SF1-215ENST00000482693 FOXP4Q8IVH2 680 aaPredicted RBP20.13■□□□□ 0.81
SF1-215ENST00000482693 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.13■□□□□ 0.81
SF1-215ENST00000482693 SLC10A4Q96EP9 437 aa20.13■□□□□ 0.81
SF1-215ENST00000482693 DDRGK1Q96HY6 314 aa20.13■□□□□ 0.81
SF1-215ENST00000482693 SAP30BPQ9UHR5 308 aaKnown RBP20.13■□□□□ 0.81
SF1-215ENST00000482693 ZNF112Q9UJU3 913 aa20.13■□□□□ 0.81
SF1-215ENST00000482693 PALD1Q9ULE6 856 aa20.13■□□□□ 0.81
SF1-215ENST00000482693 SLC4A4Q9Y6R1 1079 aa20.13■□□□□ 0.81
SF1-215ENST00000482693 WDR33Q9C0J8 1336 aaKnown RBP20.12■□□□□ 0.81
SF1-215ENST00000482693 M0R2C6 588 aa20.12■□□□□ 0.81
SF1-215ENST00000482693 HIP1O00291 1037 aa20.12■□□□□ 0.81
SF1-215ENST00000482693 PRKAB2O43741 272 aa20.12■□□□□ 0.81
SF1-215ENST00000482693 HLA-DOAP06340 250 aa20.12■□□□□ 0.81
SF1-215ENST00000482693 CYP4F22Q6NT55 531 aa20.12■□□□□ 0.81
SF1-215ENST00000482693 TTC6Q86TZ1 520 aa20.12■□□□□ 0.81
SF1-215ENST00000482693 DCP1AQ9NPI6 582 aaPredicted RBP20.12■□□□□ 0.81
SF1-215ENST00000482693 HELLSQ9NRZ9 838 aa20.12■□□□□ 0.81
SF1-215ENST00000482693 HERC5Q9UII4 1024 aaKnown RBP20.12■□□□□ 0.81
SF1-215ENST00000482693 GPAA1O43292 621 aa20.11■□□□□ 0.81
SF1-215ENST00000482693 GSPT1P15170 499 aaKnown RBP20.11■□□□□ 0.81
SF1-215ENST00000482693 SDSP20132 328 aa20.11■□□□□ 0.81
SF1-215ENST00000482693 GIMAP6Q6P9H5 292 aa20.11■□□□□ 0.81
SF1-215ENST00000482693 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.11■□□□□ 0.81
SF1-215ENST00000482693 METTL16Q86W50 562 aaKnown RBP20.11■□□□□ 0.81
SF1-215ENST00000482693 SDR42E1Q8WUS8 393 aa20.11■□□□□ 0.81
SF1-215ENST00000482693 WRNIP1Q96S55 665 aa20.11■□□□□ 0.81
SF1-215ENST00000482693 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.11■□□□□ 0.81
SF1-215ENST00000482693 MCM9Q9NXL9 1143 aa20.11■□□□□ 0.81
SF1-215ENST00000482693 CSADQ9Y600 493 aa20.11■□□□□ 0.81
SF1-215ENST00000482693 MYH7P12883 1935 aa20.1■□□□□ 0.81
SF1-215ENST00000482693 PHF20L1A8MW92 1017 aa20.1■□□□□ 0.81
SF1-215ENST00000482693 POLR3DP05423 398 aaPredicted RBP20.1■□□□□ 0.81
SF1-215ENST00000482693 SLC10A3P09131 477 aa20.1■□□□□ 0.81
SF1-215ENST00000482693 SEC62Q99442 399 aaKnown RBP20.1■□□□□ 0.81
SF1-215ENST00000482693 CEP350Q5VT06 3117 aa20.1■□□□□ 0.81
SF1-215ENST00000482693 FAM155AB1AL88 458 aaPredicted RBP20.09■□□□□ 0.81
SF1-215ENST00000482693 PATL2C9JE40 543 aaKnown RBP20.09■□□□□ 0.81
SF1-215ENST00000482693 MAP2K2P36507 400 aa20.09■□□□□ 0.81
SF1-215ENST00000482693 NOGQ13253 232 aa20.09■□□□□ 0.81
SF1-215ENST00000482693 GRM1Q13255 1194 aa20.09■□□□□ 0.81
SF1-215ENST00000482693 VGLL4Q14135 290 aa20.09■□□□□ 0.81
SF1-215ENST00000482693 MCMDC2Q4G0Z9 681 aa20.09■□□□□ 0.81
SF1-215ENST00000482693 RASAL3Q86YV0 1011 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms