RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 ACPPP15309 386 aa9.57□□□□□ -0.88
CLK1-212ENST00000482590 HSPA1LP34931 641 aa9.57□□□□□ -0.88
CLK1-212ENST00000482590 RNF43Q68DV7 783 aa9.57□□□□□ -0.88
CLK1-212ENST00000482590 ZNF438Q7Z4V0 828 aa9.57□□□□□ -0.88
CLK1-212ENST00000482590 SALL4Q9UJQ4 1053 aa9.57□□□□□ -0.88
CLK1-212ENST00000482590 OAS3Q9Y6K5 1087 aaKnown RBP9.57□□□□□ -0.88
CLK1-212ENST00000482590 NWD1Q149M9 1564 aa9.57□□□□□ -0.88
CLK1-212ENST00000482590 CHD2O14647 1828 aaKnown RBP9.56□□□□□ -0.88
CLK1-212ENST00000482590 E9PCH4 1651 aa9.56□□□□□ -0.88
CLK1-212ENST00000482590 PRR19A6NJB7 356 aa9.56□□□□□ -0.88
CLK1-212ENST00000482590 H3BRJ5 948 aa9.56□□□□□ -0.88
CLK1-212ENST00000482590 NFKBIEO00221 500 aa9.56□□□□□ -0.88
CLK1-212ENST00000482590 ADAMTS4O75173 837 aa9.56□□□□□ -0.88
CLK1-212ENST00000482590 CHMP4AQ9BY43 222 aa9.56□□□□□ -0.88
CLK1-212ENST00000482590 EID1Q9Y6B2 187 aa9.56□□□□□ -0.88
CLK1-212ENST00000482590 ROBO1Q9Y6N7 1651 aa9.55□□□□□ -0.88
CLK1-212ENST00000482590 FAM177BA6PVY3 158 aa9.55□□□□□ -0.88
CLK1-212ENST00000482590 GP2P55259 537 aaKnown RBP9.55□□□□□ -0.88
CLK1-212ENST00000482590 FAM20CQ8IXL6 584 aa9.55□□□□□ -0.88
CLK1-212ENST00000482590 C1orf127Q8N9H9 656 aa9.55□□□□□ -0.88
CLK1-212ENST00000482590 WNT8BQ93098 351 aa9.55□□□□□ -0.88
CLK1-212ENST00000482590 DBNDD2Q9BQY9 259 aa9.55□□□□□ -0.88
CLK1-212ENST00000482590 RPRD2Q5VT52 1461 aaKnown RBP9.54□□□□□ -0.88
CLK1-212ENST00000482590 TMEM2Q9UHN6 1383 aa9.54□□□□□ -0.88
CLK1-212ENST00000482590 IQGAP3Q86VI3 1631 aa9.54□□□□□ -0.88
CLK1-212ENST00000482590 SPINK2P20155 84 aa9.54□□□□□ -0.88
CLK1-212ENST00000482590 ATP2B4P23634 1241 aa9.54□□□□□ -0.88
CLK1-212ENST00000482590 IRAK1P51617 712 aa9.54□□□□□ -0.88
CLK1-212ENST00000482590 XKR5Q6UX68 686 aa9.54□□□□□ -0.88
CLK1-212ENST00000482590 TXNDC2Q86VQ3 553 aa9.54□□□□□ -0.88
CLK1-212ENST00000482590 CLEC10AQ8IUN9 316 aa9.54□□□□□ -0.88
CLK1-212ENST00000482590 FAM83CQ9BQN1 747 aa9.54□□□□□ -0.88
CLK1-212ENST00000482590 NKTRP30414 1462 aaKnown RBP9.53□□□□□ -0.88
CLK1-212ENST00000482590 TMEM131LA2VDJ0 1609 aa9.53□□□□□ -0.88
CLK1-212ENST00000482590 PAX4O43316 350 aa9.53□□□□□ -0.88
CLK1-212ENST00000482590 PREPP48147 710 aa9.53□□□□□ -0.88
CLK1-212ENST00000482590 CABP4P57796 275 aa9.53□□□□□ -0.88
CLK1-212ENST00000482590 ANKRD34AQ69YU3 496 aa9.53□□□□□ -0.88
CLK1-212ENST00000482590 INTS5Q6P9B9 1019 aaKnown RBP9.53□□□□□ -0.88
CLK1-212ENST00000482590 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.53□□□□□ -0.88
CLK1-212ENST00000482590 RETREG2Q8NC44 543 aa9.53□□□□□ -0.88
CLK1-212ENST00000482590 EDEM1Q92611 657 aa9.53□□□□□ -0.88
CLK1-212ENST00000482590 CCDC97Q96F63 343 aaPredicted RBP9.53□□□□□ -0.88
CLK1-212ENST00000482590 HHIPQ96QV1 700 aa9.53□□□□□ -0.88
CLK1-212ENST00000482590 KRTAP9-9Q9BYP9 154 aa9.53□□□□□ -0.88
CLK1-212ENST00000482590 KRTAP9-4Q9BYQ2 154 aa9.53□□□□□ -0.88
CLK1-212ENST00000482590 OSGEPQ9NPF4 335 aa9.53□□□□□ -0.88
CLK1-212ENST00000482590 DZANK1Q9NVP4 752 aa9.53□□□□□ -0.88
CLK1-212ENST00000482590 NOS1P29475 1434 aa9.53□□□□□ -0.88
CLK1-212ENST00000482590 ANKRD50Q9ULJ7 1429 aa9.53□□□□□ -0.88
CLK1-212ENST00000482590 PHLPP1O60346 1717 aa9.53□□□□□ -0.88
CLK1-212ENST00000482590 SPHKAPQ2M3C7 1700 aa9.53□□□□□ -0.88
CLK1-212ENST00000482590 TRPA1O75762 1119 aa9.52□□□□□ -0.89
CLK1-212ENST00000482590 BMP3P12645 472 aa9.52□□□□□ -0.89
CLK1-212ENST00000482590 CES1P23141 567 aa9.52□□□□□ -0.89
CLK1-212ENST00000482590 LTKP29376 864 aa9.52□□□□□ -0.89
CLK1-212ENST00000482590 NLRP12P59046 1061 aa9.52□□□□□ -0.89
CLK1-212ENST00000482590 FAM50AQ14320 339 aaKnown RBP9.52□□□□□ -0.89
CLK1-212ENST00000482590 BEND4Q6ZU67 534 aa9.52□□□□□ -0.89
CLK1-212ENST00000482590 PBXIP1Q96AQ6 731 aa9.52□□□□□ -0.89
CLK1-212ENST00000482590 GGNBP2Q9H3C7 697 aa9.52□□□□□ -0.89
CLK1-212ENST00000482590 PDE2AO00408 941 aaPredicted RBP9.51□□□□□ -0.89
CLK1-212ENST00000482590 SART1O43290 800 aaKnown RBP9.51□□□□□ -0.89
CLK1-212ENST00000482590 RPLP1P05386 114 aaKnown RBP9.51□□□□□ -0.89
CLK1-212ENST00000482590 GRIK1P39086 918 aa9.51□□□□□ -0.89
CLK1-212ENST00000482590 DNM1Q05193 864 aaKnown RBP9.51□□□□□ -0.89
CLK1-212ENST00000482590 HGSNATQ68CP4 663 aa9.51□□□□□ -0.89
CLK1-212ENST00000482590 DTX1Q86Y01 620 aa9.51□□□□□ -0.89
CLK1-212ENST00000482590 SHKBP1Q8TBC3 707 aa9.51□□□□□ -0.89
CLK1-212ENST00000482590 RNF208Q9H0X6 261 aa9.51□□□□□ -0.89
CLK1-212ENST00000482590 KCNF1Q9H3M0 494 aa9.51□□□□□ -0.89
CLK1-212ENST00000482590 SOX13Q9UN79 622 aa9.51□□□□□ -0.89
CLK1-212ENST00000482590 DIP2AQ14689 1571 aa9.5□□□□□ -0.89
CLK1-212ENST00000482590 A6NHS1 94 aa9.5□□□□□ -0.89
CLK1-212ENST00000482590 TAL1P17542 331 aaPredicted RBP9.5□□□□□ -0.89
CLK1-212ENST00000482590 HELQQ8TDG4 1101 aa9.5□□□□□ -0.89
CLK1-212ENST00000482590 SLC7A3Q8WY07 619 aa9.5□□□□□ -0.89
CLK1-212ENST00000482590 FMNL2Q96PY5 1086 aa9.5□□□□□ -0.89
CLK1-212ENST00000482590 CHRDQ9H2X0 955 aa9.5□□□□□ -0.89
CLK1-212ENST00000482590 SETD1AO15047 1707 aaKnown RBP9.5□□□□□ -0.89
CLK1-212ENST00000482590 PDGFAP04085 211 aa9.49□□□□□ -0.89
CLK1-212ENST00000482590 IDI1Q13907 227 aa9.49□□□□□ -0.89
CLK1-212ENST00000482590 RUSC1Q9BVN2 902 aa9.49□□□□□ -0.89
CLK1-212ENST00000482590 KIF1BO60333 1816 aa9.49□□□□□ -0.89
CLK1-212ENST00000482590 TMEM94Q12767 1356 aa9.49□□□□□ -0.89
CLK1-212ENST00000482590 HIF3AQ9Y2N7 669 aa9.48□□□□□ -0.89
CLK1-212ENST00000482590 MEGF11A6BM72 1044 aa9.47□□□□□ -0.89
CLK1-212ENST00000482590 C19orf57Q0VDD7 668 aa9.47□□□□□ -0.89
CLK1-212ENST00000482590 C8orf34Q49A92 452 aa9.47□□□□□ -0.89
CLK1-212ENST00000482590 NOM1Q5C9Z4 860 aaKnown RBP9.47□□□□□ -0.89
CLK1-212ENST00000482590 FDX2Q6P4F2 183 aa9.47□□□□□ -0.89
CLK1-212ENST00000482590 TMEM102Q8N9M5 508 aaPredicted RBP9.47□□□□□ -0.89
CLK1-212ENST00000482590 SLC52A1Q9NWF4 448 aa9.47□□□□□ -0.89
CLK1-212ENST00000482590 USP35Q9P2H5 1018 aa9.47□□□□□ -0.89
CLK1-212ENST00000482590 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.47□□□□□ -0.89
CLK1-212ENST00000482590 ZFYVE9O95405 1425 aa9.47□□□□□ -0.89
CLK1-212ENST00000482590 RIMS2Q9UQ26 1411 aa9.47□□□□□ -0.89
CLK1-212ENST00000482590 BTBD11A6QL63 1104 aa9.46□□□□□ -0.9
CLK1-212ENST00000482590 PATL2C9JE40 543 aaKnown RBP9.46□□□□□ -0.9
CLK1-212ENST00000482590 PPP1R15AO75807 674 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms