RNA–Protein interactions for RNA: ENST00000482140.5

OPTN-210, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 667 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-210ENST00000482140 PIH1D3Q9NQM4 214 aaKnown RBP18.07■□□□□ 0.48
OPTN-210ENST00000482140 ALDH1A1P00352 501 aa18.06■□□□□ 0.48
OPTN-210ENST00000482140 PLCG2P16885 1265 aa18.06■□□□□ 0.48
OPTN-210ENST00000482140 OTUD7BQ6GQQ9 843 aa18.06■□□□□ 0.48
OPTN-210ENST00000482140 TEX11Q8IYF3 940 aa18.06■□□□□ 0.48
OPTN-210ENST00000482140 ZKSCAN4Q969J2 545 aaPredicted RBP18.06■□□□□ 0.48
OPTN-210ENST00000482140 OTUD5Q96G74 571 aa18.06■□□□□ 0.48
OPTN-210ENST00000482140 LRRCC1Q9C099 1032 aa18.06■□□□□ 0.48
OPTN-210ENST00000482140 DDX4Q9NQI0 724 aaKnown RBP18.06■□□□□ 0.48
OPTN-210ENST00000482140 AATFQ9NY61 560 aaKnown RBP eCLIP18.06■□□□□ 0.48
OPTN-210ENST00000482140 NDUFB9Q9Y6M9 179 aa18.06■□□□□ 0.48
OPTN-210ENST00000482140 TBC1D8O95759 1140 aa18.05■□□□□ 0.48
OPTN-210ENST00000482140 MAP3K12Q12852 859 aa18.05■□□□□ 0.48
OPTN-210ENST00000482140 ERO1BQ86YB8 467 aa18.05■□□□□ 0.48
OPTN-210ENST00000482140 IFNL1Q8IU54 200 aa18.05■□□□□ 0.48
OPTN-210ENST00000482140 SNCAIPQ9Y6H5 919 aa18.05■□□□□ 0.48
OPTN-210ENST00000482140 SPDYE5A6NIY4 337 aa18.04■□□□□ 0.48
OPTN-210ENST00000482140 NPM3O75607 178 aaKnown RBP18.04■□□□□ 0.48
OPTN-210ENST00000482140 CYP7A1P22680 504 aa18.04■□□□□ 0.48
OPTN-210ENST00000482140 GTF2A2P52657 109 aa18.04■□□□□ 0.48
OPTN-210ENST00000482140 TTF1Q15361 905 aaPredicted RBP18.04■□□□□ 0.48
OPTN-210ENST00000482140 SH3RF3Q8TEJ3 882 aaPredicted RBP18.04■□□□□ 0.48
OPTN-210ENST00000482140 CNKSR2Q8WXI2 1034 aa18.04■□□□□ 0.48
OPTN-210ENST00000482140 DNAJC2Q99543 621 aaKnown RBP18.04■□□□□ 0.48
OPTN-210ENST00000482140 DDTLA6NHG4 134 aaPredicted RBP18.03■□□□□ 0.48
OPTN-210ENST00000482140 CAPN15O75808 1086 aa18.03■□□□□ 0.48
OPTN-210ENST00000482140 INPP5BP32019 993 aa18.03■□□□□ 0.48
OPTN-210ENST00000482140 SH3BP5LQ7L8J4 393 aa18.03■□□□□ 0.48
OPTN-210ENST00000482140 MAGEB6Q8N7X4 407 aa18.03■□□□□ 0.48
OPTN-210ENST00000482140 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.03■□□□□ 0.48
OPTN-210ENST00000482140 ANTXR1Q9H6X2 564 aa18.03■□□□□ 0.48
OPTN-210ENST00000482140 ZNF112Q9UJU3 913 aa18.03■□□□□ 0.48
OPTN-210ENST00000482140 CCL15-CCL14A0A0B4J2E2 113 aa18.02■□□□□ 0.48
OPTN-210ENST00000482140 PPP4CP60510 307 aa18.02■□□□□ 0.48
OPTN-210ENST00000482140 CCL15Q16663 113 aa18.02■□□□□ 0.48
OPTN-210ENST00000482140 CDK5RAP2Q96SN8 1893 aa18.02■□□□□ 0.48
OPTN-210ENST00000482140 CRBNQ96SW2 442 aa18.02■□□□□ 0.48
OPTN-210ENST00000482140 OSBPL5Q9H0X9 879 aaPredicted RBP18.02■□□□□ 0.48
OPTN-210ENST00000482140 COL2A1P02458 1487 aaPredicted RBP18.01■□□□□ 0.47
OPTN-210ENST00000482140 FOCADQ5VW36 1801 aa18.01■□□□□ 0.47
OPTN-210ENST00000482140 TESPA1A2RU30 521 aaPredicted RBP18.01■□□□□ 0.47
OPTN-210ENST00000482140 IGF2BP3O00425 579 aaKnown RBP eCLIP18.01■□□□□ 0.47
OPTN-210ENST00000482140 SMARCA5O60264 1052 aaPredicted RBP18.01■□□□□ 0.47
OPTN-210ENST00000482140 PPATQ06203 517 aa18.01■□□□□ 0.47
OPTN-210ENST00000482140 PPIL2Q13356 520 aa18.01■□□□□ 0.47
OPTN-210ENST00000482140 TMED8Q6PL24 325 aaPredicted RBP18.01■□□□□ 0.47
OPTN-210ENST00000482140 ADGRA1Q86SQ6 560 aa18.01■□□□□ 0.47
OPTN-210ENST00000482140 CERS3Q8IU89 383 aa18.01■□□□□ 0.47
OPTN-210ENST00000482140 DCTPP1Q9H773 170 aa18.01■□□□□ 0.47
OPTN-210ENST00000482140 ATRNL1Q5VV63 1379 aa18.01■□□□□ 0.47
OPTN-210ENST00000482140 GPR25O00155 361 aa18■□□□□ 0.47
OPTN-210ENST00000482140 GOLIM4O00461 696 aa18■□□□□ 0.47
OPTN-210ENST00000482140 CETPP11597 493 aa18■□□□□ 0.47
OPTN-210ENST00000482140 SNAPC2Q13487 334 aa18■□□□□ 0.47
OPTN-210ENST00000482140 DGKZQ13574 1117 aa18■□□□□ 0.47
OPTN-210ENST00000482140 NOL9Q5SY16 702 aaKnown RBP18■□□□□ 0.47
OPTN-210ENST00000482140 MIGA1Q8NAN2 632 aa18■□□□□ 0.47
OPTN-210ENST00000482140 TGFBRAP1Q8WUH2 860 aa18■□□□□ 0.47
OPTN-210ENST00000482140 MS4A4AQ96JQ5 239 aa18■□□□□ 0.47
OPTN-210ENST00000482140 CFHR5Q9BXR6 569 aa18■□□□□ 0.47
OPTN-210ENST00000482140 BOLA2Q9H3K6 86 aa18■□□□□ 0.47
OPTN-210ENST00000482140 PICK1Q9NRD5 415 aa18■□□□□ 0.47
OPTN-210ENST00000482140 DOCK1Q14185 1865 aa17.99■□□□□ 0.47
OPTN-210ENST00000482140 IRF6O14896 467 aa17.99■□□□□ 0.47
OPTN-210ENST00000482140 ATP5JP18859 108 aa17.99■□□□□ 0.47
OPTN-210ENST00000482140 DYNLL1P63167 89 aaKnown RBP17.99■□□□□ 0.47
OPTN-210ENST00000482140 MAPKAPK5Q8IW41 473 aa17.99■□□□□ 0.47
OPTN-210ENST00000482140 ZNF296Q8WUU4 475 aaPredicted RBP17.99■□□□□ 0.47
OPTN-210ENST00000482140 BRI3BPQ8WY22 251 aa17.99■□□□□ 0.47
OPTN-210ENST00000482140 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.99■□□□□ 0.47
OPTN-210ENST00000482140 PCDHB15Q9Y5E8 787 aa17.99■□□□□ 0.47
OPTN-210ENST00000482140 TBC1D12O60347 775 aa17.98■□□□□ 0.47
OPTN-210ENST00000482140 USP5P45974 858 aa17.98■□□□□ 0.47
OPTN-210ENST00000482140 MAP3K10Q02779 954 aa17.98■□□□□ 0.47
OPTN-210ENST00000482140 NOM1Q5C9Z4 860 aaKnown RBP17.98■□□□□ 0.47
OPTN-210ENST00000482140 SCYL3Q8IZE3 742 aa17.98■□□□□ 0.47
OPTN-210ENST00000482140 GPATCH3Q96I76 525 aa17.98■□□□□ 0.47
OPTN-210ENST00000482140 PTPN18Q99952 460 aa17.98■□□□□ 0.47
OPTN-210ENST00000482140 TRIM34Q9BYJ4 488 aa17.98■□□□□ 0.47
OPTN-210ENST00000482140 MCOLN1Q9GZU1 580 aa17.98■□□□□ 0.47
OPTN-210ENST00000482140 DHX36Q9H2U1 1008 aaKnown RBP17.98■□□□□ 0.47
OPTN-210ENST00000482140 PAG1Q9NWQ8 432 aa17.98■□□□□ 0.47
OPTN-210ENST00000482140 MYH1P12882 1939 aa17.98■□□□□ 0.47
OPTN-210ENST00000482140 FLT1P17948 1338 aa17.98■□□□□ 0.47
OPTN-210ENST00000482140 PHF20L1A8MW92 1017 aa17.97■□□□□ 0.47
OPTN-210ENST00000482140 FKTNO75072 461 aa17.97■□□□□ 0.47
OPTN-210ENST00000482140 TAF1CQ15572 869 aaPredicted RBP17.97■□□□□ 0.47
OPTN-210ENST00000482140 SLC9C2Q5TAH2 1124 aa17.97■□□□□ 0.47
OPTN-210ENST00000482140 ABHD8Q96I13 439 aa17.97■□□□□ 0.47
OPTN-210ENST00000482140 R3HDMLQ9H3Y0 253 aa17.97■□□□□ 0.47
OPTN-210ENST00000482140 PI4KBQ9UBF8 816 aa17.97■□□□□ 0.47
OPTN-210ENST00000482140 MYH7P12883 1935 aa17.96■□□□□ 0.47
OPTN-210ENST00000482140 FAM196BA6NMK8 535 aa17.96■□□□□ 0.47
OPTN-210ENST00000482140 CTNND1O60716 968 aaKnown RBP17.96■□□□□ 0.47
OPTN-210ENST00000482140 HLA-DOAP06340 250 aa17.96■□□□□ 0.47
OPTN-210ENST00000482140 SLURP2P0DP57 97 aa17.96■□□□□ 0.47
OPTN-210ENST00000482140 PDE6AP16499 860 aa17.96■□□□□ 0.47
OPTN-210ENST00000482140 CRHR2Q13324 411 aa17.96■□□□□ 0.47
OPTN-210ENST00000482140 CTU1Q7Z7A3 348 aaKnown RBP17.96■□□□□ 0.47
OPTN-210ENST00000482140 EDC3Q96F86 508 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms