RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 JAG2Q9Y219 1238 aa21.48■■□□□ 1.03
MRPL28-209ENST00000481453 NRXN2Q9P2S2 1712 aa21.48■■□□□ 1.03
MRPL28-209ENST00000481453 BAZ2AQ9UIF9 1905 aaKnown RBP21.48■■□□□ 1.03
MRPL28-209ENST00000481453 GOLGA6L4A6NEF3 574 aa21.48■■□□□ 1.03
MRPL28-209ENST00000481453 PRKCSHP14314 528 aaPredicted RBP21.48■■□□□ 1.03
MRPL28-209ENST00000481453 TDRD7Q8NHU6 1098 aaKnown RBP21.48■■□□□ 1.03
MRPL28-209ENST00000481453 SPATA32Q96LK8 384 aa21.48■■□□□ 1.03
MRPL28-209ENST00000481453 BRIP1Q9BX63 1249 aa21.48■■□□□ 1.03
MRPL28-209ENST00000481453 TFIP11Q9UBB9 837 aaKnown RBP21.48■■□□□ 1.03
MRPL28-209ENST00000481453 LRRC37AA6NMS7 1700 aa21.47■■□□□ 1.03
MRPL28-209ENST00000481453 DHX16O60231 1041 aaKnown RBP21.47■■□□□ 1.03
MRPL28-209ENST00000481453 LIG1P18858 919 aa21.47■■□□□ 1.03
MRPL28-209ENST00000481453 TMEM67Q5HYA8 995 aa21.47■■□□□ 1.03
MRPL28-209ENST00000481453 NUP62CLQ9H1M0 184 aa21.47■■□□□ 1.03
MRPL28-209ENST00000481453 LTBP1Q14766 1721 aa21.47■■□□□ 1.03
MRPL28-209ENST00000481453 UQCRHLA0A096LP55 91 aa21.47■■□□□ 1.03
MRPL28-209ENST00000481453 APBA3O96018 575 aa21.47■■□□□ 1.03
MRPL28-209ENST00000481453 UQCRHP07919 91 aa21.47■■□□□ 1.03
MRPL28-209ENST00000481453 LIFRP42702 1097 aa21.47■■□□□ 1.03
MRPL28-209ENST00000481453 MAP3K11Q16584 847 aa21.47■■□□□ 1.03
MRPL28-209ENST00000481453 COL23A1Q86Y22 540 aaPredicted RBP21.47■■□□□ 1.03
MRPL28-209ENST00000481453 ADD1P35611 737 aaKnown RBP21.46■■□□□ 1.03
MRPL28-209ENST00000481453 TTC12Q9H892 705 aaPredicted RBP21.46■■□□□ 1.03
MRPL28-209ENST00000481453 TNS1Q9HBL0 1735 aaKnown RBP21.46■■□□□ 1.03
MRPL28-209ENST00000481453 DUOX1Q9NRD9 1551 aa21.45■■□□□ 1.03
MRPL28-209ENST00000481453 HMGB2P26583 209 aaKnown RBP21.45■■□□□ 1.03
MRPL28-209ENST00000481453 CAMK4Q16566 473 aa21.45■■□□□ 1.03
MRPL28-209ENST00000481453 LEO1Q8WVC0 666 aaPredicted RBP21.45■■□□□ 1.03
MRPL28-209ENST00000481453 IFIT3O14879 490 aaKnown RBP21.45■■□□□ 1.02
MRPL28-209ENST00000481453 METAP2P50579 478 aaKnown RBP eCLIP21.45■■□□□ 1.02
MRPL28-209ENST00000481453 RRP12Q5JTH9 1297 aaKnown RBP21.45■■□□□ 1.02
MRPL28-209ENST00000481453 SASS6Q6UVJ0 657 aa21.45■■□□□ 1.02
MRPL28-209ENST00000481453 STK11IPQ8N1F8 1099 aa21.45■■□□□ 1.02
MRPL28-209ENST00000481453 CRAMP1Q96RY5 1269 aa21.45■■□□□ 1.02
MRPL28-209ENST00000481453 FAM217BQ9NTX9 383 aaPredicted RBP21.45■■□□□ 1.02
MRPL28-209ENST00000481453 MINDY4BA8MYZ0 360 aa21.44■■□□□ 1.02
MRPL28-209ENST00000481453 RXRAP19793 462 aa21.44■■□□□ 1.02
MRPL28-209ENST00000481453 CDC27P30260 824 aa21.44■■□□□ 1.02
MRPL28-209ENST00000481453 GUCY1B3Q02153 619 aa21.44■■□□□ 1.02
MRPL28-209ENST00000481453 ILDR1Q86SU0 546 aaPredicted RBP21.44■■□□□ 1.02
MRPL28-209ENST00000481453 PIBF1Q8WXW3 757 aa21.44■■□□□ 1.02
MRPL28-209ENST00000481453 RNF41Q9H4P4 317 aaPredicted RBP21.44■■□□□ 1.02
MRPL28-209ENST00000481453 AATFQ9NY61 560 aaKnown RBP eCLIP21.44■■□□□ 1.02
MRPL28-209ENST00000481453 ORC3Q9UBD5 711 aaPredicted RBP21.44■■□□□ 1.02
MRPL28-209ENST00000481453 ECM29Q5VYK3 1845 aa21.44■■□□□ 1.02
MRPL28-209ENST00000481453 CYP2D7A0A087X1C5 515 aa21.44■■□□□ 1.02
MRPL28-209ENST00000481453 BBOX1O75936 387 aa21.44■■□□□ 1.02
MRPL28-209ENST00000481453 DNTTIP2Q5QJE6 756 aaKnown RBP21.44■■□□□ 1.02
MRPL28-209ENST00000481453 TMED8Q6PL24 325 aaPredicted RBP21.44■■□□□ 1.02
MRPL28-209ENST00000481453 DACT1Q9NYF0 836 aa21.44■■□□□ 1.02
MRPL28-209ENST00000481453 NID2Q14112 1375 aa21.44■■□□□ 1.02
MRPL28-209ENST00000481453 LAMB1P07942 1786 aa21.43■■□□□ 1.02
MRPL28-209ENST00000481453 CPLX1O14810 134 aa21.43■■□□□ 1.02
MRPL28-209ENST00000481453 ZBTB43O43298 467 aa21.43■■□□□ 1.02
MRPL28-209ENST00000481453 UFL1O94874 794 aa21.43■■□□□ 1.02
MRPL28-209ENST00000481453 ATP2B4P23634 1241 aa21.43■■□□□ 1.02
MRPL28-209ENST00000481453 CTR9Q6PD62 1173 aa21.43■■□□□ 1.02
MRPL28-209ENST00000481453 ZNF804AQ7Z570 1209 aa21.43■■□□□ 1.02
MRPL28-209ENST00000481453 MICU3Q86XE3 530 aa21.43■■□□□ 1.02
MRPL28-209ENST00000481453 MYL10Q9BUA6 226 aa21.43■■□□□ 1.02
MRPL28-209ENST00000481453 TNMDQ9H2S6 317 aa21.43■■□□□ 1.02
MRPL28-209ENST00000481453 AP5Z1O43299 807 aa21.43■■□□□ 1.02
MRPL28-209ENST00000481453 GRIK5Q16478 980 aa21.43■■□□□ 1.02
MRPL28-209ENST00000481453 WDR66Q8TBY9 1149 aa21.43■■□□□ 1.02
MRPL28-209ENST00000481453 ZKSCAN3Q9BRR0 538 aa21.43■■□□□ 1.02
MRPL28-209ENST00000481453 MTA3Q9BTC8 594 aa21.43■■□□□ 1.02
MRPL28-209ENST00000481453 TOMM22Q9NS69 142 aa21.43■■□□□ 1.02
MRPL28-209ENST00000481453 PODXL2Q9NZ53 605 aa21.43■■□□□ 1.02
MRPL28-209ENST00000481453 TYRO3Q06418 890 aa21.42■■□□□ 1.02
MRPL28-209ENST00000481453 NOLC1Q14978 699 aaKnown RBP eCLIP21.42■■□□□ 1.02
MRPL28-209ENST00000481453 NTRK3Q16288 839 aa21.42■■□□□ 1.02
MRPL28-209ENST00000481453 SPTY2D1Q68D10 685 aaPredicted RBP21.42■■□□□ 1.02
MRPL28-209ENST00000481453 OTUD7BQ6GQQ9 843 aa21.42■■□□□ 1.02
MRPL28-209ENST00000481453 NFXL1Q6ZNB6 911 aa21.42■■□□□ 1.02
MRPL28-209ENST00000481453 FAM200AQ8TCP9 573 aa21.42■■□□□ 1.02
MRPL28-209ENST00000481453 GGA1Q9UJY5 639 aa21.42■■□□□ 1.02
MRPL28-209ENST00000481453 FGRP09769 529 aa21.41■■□□□ 1.02
MRPL28-209ENST00000481453 DCP1AQ9NPI6 582 aaPredicted RBP21.41■■□□□ 1.02
MRPL28-209ENST00000481453 RXRBP28702 533 aa21.41■■□□□ 1.02
MRPL28-209ENST00000481453 RBM10P98175 930 aaKnown RBP21.41■■□□□ 1.02
MRPL28-209ENST00000481453 EVX2Q03828 476 aa21.41■■□□□ 1.02
MRPL28-209ENST00000481453 DZIP1Q86YF9 867 aaKnown RBP21.41■■□□□ 1.02
MRPL28-209ENST00000481453 CCDC144CPQ8IYA2 1237 aa21.41■■□□□ 1.02
MRPL28-209ENST00000481453 CKAP2LQ8IYA6 745 aa21.41■■□□□ 1.02
MRPL28-209ENST00000481453 NLGN1Q8N2Q7 840 aa21.41■■□□□ 1.02
MRPL28-209ENST00000481453 FBXO18Q8NFZ0 1043 aa21.41■■□□□ 1.02
MRPL28-209ENST00000481453 C8orf76Q96K31 380 aa21.41■■□□□ 1.02
MRPL28-209ENST00000481453 PDCL3Q9H2J4 239 aa21.41■■□□□ 1.02
MRPL28-209ENST00000481453 DDX19AQ9NUU7 478 aaKnown RBP21.41■■□□□ 1.02
MRPL28-209ENST00000481453 POLLQ9UGP5 575 aa21.41■■□□□ 1.02
MRPL28-209ENST00000481453 MRVI1Q9Y6F6 885 aa21.41■■□□□ 1.02
MRPL28-209ENST00000481453 GOLGA8AA7E2F4 631 aa21.4■■□□□ 1.02
MRPL28-209ENST00000481453 GLIPR1L2Q4G1C9 344 aa21.4■■□□□ 1.02
MRPL28-209ENST00000481453 PGBD1Q96JS3 809 aa21.4■■□□□ 1.02
MRPL28-209ENST00000481453 CRNKL1Q9BZJ0 848 aaKnown RBP21.4■■□□□ 1.02
MRPL28-209ENST00000481453 CD209Q9NNX6 404 aa21.4■■□□□ 1.02
MRPL28-209ENST00000481453 GJB4Q9NTQ9 266 aa21.4■■□□□ 1.02
MRPL28-209ENST00000481453 SLC12A7Q9Y666 1083 aa21.4■■□□□ 1.02
MRPL28-209ENST00000481453 USP17L12C9JPN9 530 aa21.4■■□□□ 1.02
MRPL28-209ENST00000481453 USP17L21D6R901 530 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms