RNA–Protein interactions for RNA: ENST00000481385.6

PHF3-204, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-204ENST00000481385 STAG1Q8WVM7 1258 aa16.32■□□□□ 0.2
PHF3-204ENST00000481385 MAP3K14Q99558 947 aa16.32■□□□□ 0.2
PHF3-204ENST00000481385 TOMM22Q9NS69 142 aa16.32■□□□□ 0.2
PHF3-204ENST00000481385 ABCF2Q9UG63 623 aa16.32■□□□□ 0.2
PHF3-204ENST00000481385 ZNF804BA4D1E1 1349 aa16.32■□□□□ 0.2
PHF3-204ENST00000481385 GOLGA6L19H0YKK7 550 aa16.32■□□□□ 0.2
PHF3-204ENST00000481385 CDKL5O76039 1030 aa16.32■□□□□ 0.2
PHF3-204ENST00000481385 ZNF202O95125 648 aa16.32■□□□□ 0.2
PHF3-204ENST00000481385 TPM3P06753 285 aa16.32■□□□□ 0.2
PHF3-204ENST00000481385 PTPAQ15257 358 aa16.32■□□□□ 0.2
PHF3-204ENST00000481385 FAM98CQ17RN3 349 aaKnown RBP16.32■□□□□ 0.2
PHF3-204ENST00000481385 SARM1Q6SZW1 724 aa16.32■□□□□ 0.2
PHF3-204ENST00000481385 BARGINQ6ZT62 677 aa16.32■□□□□ 0.2
PHF3-204ENST00000481385 ANO10Q9NW15 660 aa16.32■□□□□ 0.2
PHF3-204ENST00000481385 CYP7A1P22680 504 aa16.31■□□□□ 0.2
PHF3-204ENST00000481385 KLRK1P26718 216 aa16.31■□□□□ 0.2
PHF3-204ENST00000481385 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.31■□□□□ 0.2
PHF3-204ENST00000481385 CCDC82Q8N4S0 544 aa16.31■□□□□ 0.2
PHF3-204ENST00000481385 ZNF384Q8TF68 577 aa16.31■□□□□ 0.2
PHF3-204ENST00000481385 CACTINQ8WUQ7 758 aaKnown RBP16.31■□□□□ 0.2
PHF3-204ENST00000481385 TSC1Q92574 1164 aa16.31■□□□□ 0.2
PHF3-204ENST00000481385 KIAA1468Q9P260 1216 aa16.31■□□□□ 0.2
PHF3-204ENST00000481385 LTBP4Q8N2S1 1624 aa16.31■□□□□ 0.2
PHF3-204ENST00000481385 CCDC69A6NI79 296 aa16.31■□□□□ 0.2
PHF3-204ENST00000481385 BIN1O00499 593 aa16.31■□□□□ 0.2
PHF3-204ENST00000481385 CELF1Q92879 486 aaKnown RBP16.31■□□□□ 0.2
PHF3-204ENST00000481385 CLIC6Q96NY7 704 aa16.31■□□□□ 0.2
PHF3-204ENST00000481385 U2AF2P26368 475 aaKnown RBP eCLIP16.3■□□□□ 0.22e-6■□□□□ 11.3
PHF3-204ENST00000481385 SHC4Q6S5L8 630 aa16.3■□□□□ 0.2
PHF3-204ENST00000481385 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.3■□□□□ 0.2
PHF3-204ENST00000481385 CNNM2Q9H8M5 875 aa16.3■□□□□ 0.2
PHF3-204ENST00000481385 BCL2L12Q9HB09 334 aa16.3■□□□□ 0.2
PHF3-204ENST00000481385 A0A1B0GUL6 1792 aa16.3■□□□□ 0.2
PHF3-204ENST00000481385 CMA1P23946 247 aa16.3■□□□□ 0.2
PHF3-204ENST00000481385 HSP90AA2PQ14568 343 aaPredicted RBP16.3■□□□□ 0.2
PHF3-204ENST00000481385 TBC1D9BQ66K14 1250 aa16.3■□□□□ 0.2
PHF3-204ENST00000481385 CDC5LQ99459 802 aaKnown RBP16.3■□□□□ 0.2
PHF3-204ENST00000481385 KRT23Q9C075 422 aa16.3■□□□□ 0.2
PHF3-204ENST00000481385 ZNF652Q9Y2D9 606 aa16.3■□□□□ 0.2
PHF3-204ENST00000481385 CASZ1Q86V15 1759 aa16.29■□□□□ 0.2
PHF3-204ENST00000481385 CYP2D7A0A087X1C5 515 aa16.29■□□□□ 0.2
PHF3-204ENST00000481385 BECN2A8MW95 431 aa16.29■□□□□ 0.2
PHF3-204ENST00000481385 FMNL1O95466 1100 aaPredicted RBP16.29■□□□□ 0.2
PHF3-204ENST00000481385 GNAT2P19087 354 aa16.29■□□□□ 0.2
PHF3-204ENST00000481385 DYNLL1P63167 89 aaKnown RBP16.29■□□□□ 0.2
PHF3-204ENST00000481385 EVX2Q03828 476 aa16.29■□□□□ 0.2
PHF3-204ENST00000481385 PPARAQ07869 468 aa16.29■□□□□ 0.2
PHF3-204ENST00000481385 ANKRD18AQ8IVF6 992 aa16.29■□□□□ 0.2
PHF3-204ENST00000481385 CCDC24Q8N4L8 307 aa16.29■□□□□ 0.2
PHF3-204ENST00000481385 NACAP1Q9BZK3 213 aa16.29■□□□□ 0.2
PHF3-204ENST00000481385 RAI14Q9P0K7 980 aa16.29■□□□□ 0.2
PHF3-204ENST00000481385 MINPP1Q9UNW1 487 aa16.29■□□□□ 0.2
PHF3-204ENST00000481385 KCNJ14Q9UNX9 436 aa16.29■□□□□ 0.2
PHF3-204ENST00000481385 CDC25BP30305 580 aa16.29■□□□□ 0.2
PHF3-204ENST00000481385 CPLX2Q6PUV4 134 aaKnown RBP16.29■□□□□ 0.2
PHF3-204ENST00000481385 NBPF11Q86T75 865 aa16.29■□□□□ 0.2
PHF3-204ENST00000481385 CEP57L1Q8IYX8 460 aa16.29■□□□□ 0.2
PHF3-204ENST00000481385 RIOK1Q9BRS2 568 aaKnown RBP16.29■□□□□ 0.2
PHF3-204ENST00000481385 FAM13BQ9NYF5 915 aa16.29■□□□□ 0.2
PHF3-204ENST00000481385 CACNA1SQ13698 1873 aa16.28■□□□□ 0.2
PHF3-204ENST00000481385 MINDY4BA8MYZ0 360 aa16.28■□□□□ 0.2
PHF3-204ENST00000481385 PIP4K2BP78356 416 aa16.28■□□□□ 0.2
PHF3-204ENST00000481385 SSRP1Q08945 709 aaKnown RBP16.28■□□□□ 0.2
PHF3-204ENST00000481385 SF3B3Q15393 1217 aaKnown RBP16.28■□□□□ 0.2
PHF3-204ENST00000481385 ISM2Q6H9L7 571 aa16.28■□□□□ 0.2
PHF3-204ENST00000481385 CLEC4GQ6UXB4 293 aa16.28■□□□□ 0.2
PHF3-204ENST00000481385 MYRIPQ8NFW9 859 aa16.28■□□□□ 0.2
PHF3-204ENST00000481385 NID2Q14112 1375 aa16.28■□□□□ 0.2
PHF3-204ENST00000481385 BTBD18B2RXH4 712 aa16.28■□□□□ 0.2
PHF3-204ENST00000481385 IFNAR1P17181 557 aa16.28■□□□□ 0.2
PHF3-204ENST00000481385 GNL2Q13823 731 aaKnown RBP16.28■□□□□ 0.2
PHF3-204ENST00000481385 WTAPQ15007 396 aa16.28■□□□□ 0.2
PHF3-204ENST00000481385 SLC51AQ86UW1 340 aa16.28■□□□□ 0.2
PHF3-204ENST00000481385 AMIGO3Q86WK7 504 aa16.28■□□□□ 0.2
PHF3-204ENST00000481385 SMARCC1Q92922 1105 aaPredicted RBP16.28■□□□□ 0.2
PHF3-204ENST00000481385 BSDC1Q9NW68 430 aaPredicted RBP16.28■□□□□ 0.2
PHF3-204ENST00000481385 SRP68Q9UHB9 627 aaKnown RBP16.28■□□□□ 0.2
PHF3-204ENST00000481385 HPSEQ9Y251 543 aa16.28■□□□□ 0.2
PHF3-204ENST00000481385 STK36Q9NRP7 1315 aa16.27■□□□□ 0.2
PHF3-204ENST00000481385 RRP9O43818 475 aaKnown RBP16.27■□□□□ 0.2
PHF3-204ENST00000481385 RGS22Q8NE09 1264 aa16.27■□□□□ 0.2
PHF3-204ENST00000481385 SHISA4Q96DD7 197 aa16.27■□□□□ 0.2
PHF3-204ENST00000481385 MRFAP1L1Q96HT8 127 aa16.27■□□□□ 0.2
PHF3-204ENST00000481385 FAM84BQ96KN1 310 aaPredicted RBP16.27■□□□□ 0.2
PHF3-204ENST00000481385 MAGEB6P1A0A0J9YX57 407 aa16.27■□□□□ 0.2
PHF3-204ENST00000481385 SLC3A2P08195 630 aaKnown RBP16.27■□□□□ 0.2
PHF3-204ENST00000481385 TOB1P50616 345 aaPredicted RBP16.27■□□□□ 0.2
PHF3-204ENST00000481385 RTN1Q16799 776 aa16.27■□□□□ 0.2
PHF3-204ENST00000481385 EP400Q96L91 3159 aa16.26■□□□□ 0.19
PHF3-204ENST00000481385 PPP6R2O75170 966 aa16.26■□□□□ 0.19
PHF3-204ENST00000481385 GRIN1Q05586 938 aa16.26■□□□□ 0.19
PHF3-204ENST00000481385 TRIM29Q14134 588 aa16.26■□□□□ 0.19
PHF3-204ENST00000481385 SPECC1Q5M775 1068 aa16.26■□□□□ 0.19
PHF3-204ENST00000481385 NUP133Q8WUM0 1156 aa16.26■□□□□ 0.19
PHF3-204ENST00000481385 SCN7AQ01118 1682 aa16.26■□□□□ 0.19
PHF3-204ENST00000481385 DYNC1I1O14576 645 aa16.26■□□□□ 0.19
PHF3-204ENST00000481385 MMP1P03956 469 aa16.26■□□□□ 0.19
PHF3-204ENST00000481385 UBE4AQ14139 1066 aa16.26■□□□□ 0.19
PHF3-204ENST00000481385 SEC23AQ15436 765 aa16.26■□□□□ 0.19
PHF3-204ENST00000481385 NOSTRINQ8IVI9 506 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms