RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 NAA16Q6N069 864 aaPredicted RBP20.79■□□□□ 0.92
HSPG2-209ENST00000480900 ERO1BQ86YB8 467 aa20.79■□□□□ 0.92
HSPG2-209ENST00000480900 CNKSR2Q8WXI2 1034 aa20.79■□□□□ 0.92
HSPG2-209ENST00000480900 DDX4Q9NQI0 724 aaKnown RBP20.79■□□□□ 0.92
HSPG2-209ENST00000480900 ZNF112Q9UJU3 913 aa20.79■□□□□ 0.92
HSPG2-209ENST00000480900 ATRNL1Q5VV63 1379 aa20.79■□□□□ 0.92
HSPG2-209ENST00000480900 COL2A1P02458 1487 aaPredicted RBP20.78■□□□□ 0.92
HSPG2-209ENST00000480900 IGF2BP3O00425 579 aaKnown RBP eCLIP20.78■□□□□ 0.92
HSPG2-209ENST00000480900 OTUD7BQ6GQQ9 843 aa20.78■□□□□ 0.92
HSPG2-209ENST00000480900 ZKSCAN4Q969J2 545 aaPredicted RBP20.78■□□□□ 0.92
HSPG2-209ENST00000480900 OTUD5Q96G74 571 aa20.78■□□□□ 0.92
HSPG2-209ENST00000480900 MS4A4AQ96JQ5 239 aa20.78■□□□□ 0.92
HSPG2-209ENST00000480900 NOL10Q9BSC4 688 aaKnown RBP20.78■□□□□ 0.92
HSPG2-209ENST00000480900 PIH1D3Q9NQM4 214 aaKnown RBP20.78■□□□□ 0.92
HSPG2-209ENST00000480900 DOCK1Q14185 1865 aa20.77■□□□□ 0.92
HSPG2-209ENST00000480900 APBB1O00213 710 aa20.77■□□□□ 0.92
HSPG2-209ENST00000480900 INPP5BP32019 993 aa20.77■□□□□ 0.92
HSPG2-209ENST00000480900 GTF2A2P52657 109 aa20.77■□□□□ 0.92
HSPG2-209ENST00000480900 PICALMQ13492 652 aa20.77■□□□□ 0.92
HSPG2-209ENST00000480900 ZSCAN29Q8IWY8 852 aaPredicted RBP20.77■□□□□ 0.92
HSPG2-209ENST00000480900 ABHD8Q96I13 439 aa20.77■□□□□ 0.92
HSPG2-209ENST00000480900 CAPN15O75808 1086 aa20.76■□□□□ 0.91
HSPG2-209ENST00000480900 PLCG2P16885 1265 aa20.76■□□□□ 0.91
HSPG2-209ENST00000480900 NOL9Q5SY16 702 aaKnown RBP20.76■□□□□ 0.91
HSPG2-209ENST00000480900 SH3BP5LQ7L8J4 393 aa20.76■□□□□ 0.91
HSPG2-209ENST00000480900 PTPRFP10586 1907 aa20.75■□□□□ 0.91
HSPG2-209ENST00000480900 MYH1P12882 1939 aa20.75■□□□□ 0.91
HSPG2-209ENST00000480900 DDTLA6NHG4 134 aaPredicted RBP20.75■□□□□ 0.91
HSPG2-209ENST00000480900 GPR25O00155 361 aa20.75■□□□□ 0.91
HSPG2-209ENST00000480900 BAG3O95817 575 aa20.75■□□□□ 0.91
HSPG2-209ENST00000480900 PPP4CP60510 307 aa20.75■□□□□ 0.91
HSPG2-209ENST00000480900 MAP3K10Q02779 954 aa20.75■□□□□ 0.91
HSPG2-209ENST00000480900 PPIL2Q13356 520 aa20.75■□□□□ 0.91
HSPG2-209ENST00000480900 DGKZQ13574 1117 aa20.75■□□□□ 0.91
HSPG2-209ENST00000480900 TMED8Q6PL24 325 aaPredicted RBP20.75■□□□□ 0.91
HSPG2-209ENST00000480900 TEX11Q8IYF3 940 aa20.75■□□□□ 0.91
HSPG2-209ENST00000480900 YTHDC1Q96MU7 727 aaKnown RBP20.75■□□□□ 0.91
HSPG2-209ENST00000480900 PTPN18Q99952 460 aa20.75■□□□□ 0.91
HSPG2-209ENST00000480900 MCOLN1Q9GZU1 580 aa20.75■□□□□ 0.91
HSPG2-209ENST00000480900 ATAD5Q96QE3 1844 aa20.75■□□□□ 0.91
HSPG2-209ENST00000480900 MYH7P12883 1935 aa20.74■□□□□ 0.91
HSPG2-209ENST00000480900 CCL15-CCL14A0A0B4J2E2 113 aa20.74■□□□□ 0.91
HSPG2-209ENST00000480900 IFIT2P09913 472 aaKnown RBP20.74■□□□□ 0.91
HSPG2-209ENST00000480900 RRP1P56182 461 aaKnown RBP20.74■□□□□ 0.91
HSPG2-209ENST00000480900 PPATQ06203 517 aa20.74■□□□□ 0.91
HSPG2-209ENST00000480900 CCL15Q16663 113 aa20.74■□□□□ 0.91
HSPG2-209ENST00000480900 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.74■□□□□ 0.91
HSPG2-209ENST00000480900 ZNF296Q8WUU4 475 aaPredicted RBP20.74■□□□□ 0.91
HSPG2-209ENST00000480900 BRI3BPQ8WY22 251 aa20.74■□□□□ 0.91
HSPG2-209ENST00000480900 R3HDMLQ9H3Y0 253 aa20.74■□□□□ 0.91
HSPG2-209ENST00000480900 AATFQ9NY61 560 aaKnown RBP eCLIP20.74■□□□□ 0.91
HSPG2-209ENST00000480900 SIPA1L1O43166 1804 aa20.74■□□□□ 0.91
HSPG2-209ENST00000480900 PHIPQ8WWQ0 1821 aa20.74■□□□□ 0.91
HSPG2-209ENST00000480900 PHF20L1A8MW92 1017 aa20.73■□□□□ 0.91
HSPG2-209ENST00000480900 IRF6O14896 467 aa20.73■□□□□ 0.91
HSPG2-209ENST00000480900 IDH1O75874 414 aaKnown RBP20.73■□□□□ 0.91
HSPG2-209ENST00000480900 CETPP11597 493 aa20.73■□□□□ 0.91
HSPG2-209ENST00000480900 CTU1Q7Z7A3 348 aaKnown RBP20.73■□□□□ 0.91
HSPG2-209ENST00000480900 ADGRA1Q86SQ6 560 aa20.73■□□□□ 0.91
HSPG2-209ENST00000480900 SH3RF3Q8TEJ3 882 aaPredicted RBP20.73■□□□□ 0.91
HSPG2-209ENST00000480900 OSBPL5Q9H0X9 879 aaPredicted RBP20.73■□□□□ 0.91
HSPG2-209ENST00000480900 NDUFB9Q9Y6M9 179 aa20.73■□□□□ 0.91
HSPG2-209ENST00000480900 FKTNO75072 461 aa20.72■□□□□ 0.91
HSPG2-209ENST00000480900 SNAPC2Q13487 334 aa20.72■□□□□ 0.91
HSPG2-209ENST00000480900 TBC1D12O60347 775 aa20.71■□□□□ 0.91
HSPG2-209ENST00000480900 CYP7A1P22680 504 aa20.71■□□□□ 0.91
HSPG2-209ENST00000480900 MAP3K12Q12852 859 aa20.71■□□□□ 0.91
HSPG2-209ENST00000480900 TTF1Q15361 905 aaPredicted RBP20.71■□□□□ 0.91
HSPG2-209ENST00000480900 CERS3Q8IU89 383 aa20.71■□□□□ 0.91
HSPG2-209ENST00000480900 LRRCC1Q9C099 1032 aa20.71■□□□□ 0.91
HSPG2-209ENST00000480900 ANTXR1Q9H6X2 564 aa20.71■□□□□ 0.91
HSPG2-209ENST00000480900 CRHR2Q13324 411 aa20.7■□□□□ 0.9
HSPG2-209ENST00000480900 SCYL3Q8IZE3 742 aa20.7■□□□□ 0.9
HSPG2-209ENST00000480900 MAGEB6Q8N7X4 407 aa20.7■□□□□ 0.9
HSPG2-209ENST00000480900 ZCCHC17Q9NP64 241 aaKnown RBP20.7■□□□□ 0.9
HSPG2-209ENST00000480900 KCNH4Q9UQ05 1017 aa20.7■□□□□ 0.9
HSPG2-209ENST00000480900 CTNND1O60716 968 aaKnown RBP20.69■□□□□ 0.9
HSPG2-209ENST00000480900 DHX36Q9H2U1 1008 aaKnown RBP20.69■□□□□ 0.9
HSPG2-209ENST00000480900 TAF1CQ15572 869 aaPredicted RBP20.68■□□□□ 0.9
HSPG2-209ENST00000480900 FAM43AQ8N2R8 423 aa20.68■□□□□ 0.9
HSPG2-209ENST00000480900 TGFBRAP1Q8WUH2 860 aa20.68■□□□□ 0.9
HSPG2-209ENST00000480900 BCL11AQ9H165 835 aa20.68■□□□□ 0.9
HSPG2-209ENST00000480900 DCTPP1Q9H773 170 aa20.68■□□□□ 0.9
HSPG2-209ENST00000480900 PICK1Q9NRD5 415 aa20.68■□□□□ 0.9
HSPG2-209ENST00000480900 FLT1P17948 1338 aa20.68■□□□□ 0.9
HSPG2-209ENST00000480900 BTBD19C9JJ37 291 aa20.67■□□□□ 0.9
HSPG2-209ENST00000480900 PTPRAP18433 802 aa20.67■□□□□ 0.9
HSPG2-209ENST00000480900 ATP5JP18859 108 aa20.67■□□□□ 0.9
HSPG2-209ENST00000480900 PKN2Q16513 984 aaKnown RBP20.67■□□□□ 0.9
HSPG2-209ENST00000480900 DNAJC2Q99543 621 aaKnown RBP20.67■□□□□ 0.9
HSPG2-209ENST00000480900 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.67■□□□□ 0.9
HSPG2-209ENST00000480900 PI4KBQ9UBF8 816 aa20.67■□□□□ 0.9
HSPG2-209ENST00000480900 HERC5Q9UII4 1024 aaKnown RBP20.67■□□□□ 0.9
HSPG2-209ENST00000480900 NAV1Q8NEY1 1877 aa20.67■□□□□ 0.9
HSPG2-209ENST00000480900 CXCL11O14625 94 aa20.66■□□□□ 0.9
HSPG2-209ENST00000480900 SLURP2P0DP57 97 aa20.66■□□□□ 0.9
HSPG2-209ENST00000480900 DYNLL1P63167 89 aaKnown RBP20.66■□□□□ 0.9
HSPG2-209ENST00000480900 MAPKAPK5Q8IW41 473 aa20.66■□□□□ 0.9
HSPG2-209ENST00000480900 ZFYVE28Q9HCC9 887 aa20.66■□□□□ 0.9
HSPG2-209ENST00000480900 DDX60LQ5H9U9 1706 aaKnown RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms