RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 AFG3L2Q9Y4W6 797 aa14.16□□□□□ -0.14
TTC28-206ENST00000480563 EYA2O00167 538 aa14.15□□□□□ -0.14
TTC28-206ENST00000480563 LDHBP07195 334 aaKnown RBP14.15□□□□□ -0.14
TTC28-206ENST00000480563 PTPRAP18433 802 aa14.15□□□□□ -0.14
TTC28-206ENST00000480563 CRISPLD2Q9H0B8 497 aa14.15□□□□□ -0.14
TTC28-206ENST00000480563 PAK6Q9NQU5 681 aaPredicted RBP14.15□□□□□ -0.14
TTC28-206ENST00000480563 TAOK2Q9UL54 1235 aa14.15□□□□□ -0.14
TTC28-206ENST00000480563 SLC45A1Q9Y2W3 748 aa14.15□□□□□ -0.14
TTC28-206ENST00000480563 NECAB2Q7Z6G3 386 aa14.14□□□□□ -0.15
TTC28-206ENST00000480563 SMCR8Q8TEV9 937 aaPredicted RBP14.14□□□□□ -0.15
TTC28-206ENST00000480563 MRS2Q9HD23 443 aa14.14□□□□□ -0.15
TTC28-206ENST00000480563 LRRFIP2Q9Y608 721 aaKnown RBP14.14□□□□□ -0.15
TTC28-206ENST00000480563 CUL9Q8IWT3 2517 aa14.13□□□□□ -0.15
TTC28-206ENST00000480563 ATRNL1Q5VV63 1379 aa14.13□□□□□ -0.15
TTC28-206ENST00000480563 ENTPD3O75355 529 aa14.13□□□□□ -0.15
TTC28-206ENST00000480563 RFX5P48382 616 aaPredicted RBP14.13□□□□□ -0.15
TTC28-206ENST00000480563 RGS3P49796 1198 aa14.13□□□□□ -0.15
TTC28-206ENST00000480563 ZSCAN29Q8IWY8 852 aaPredicted RBP14.13□□□□□ -0.15
TTC28-206ENST00000480563 COA7Q96BR5 231 aa14.13□□□□□ -0.15
TTC28-206ENST00000480563 IDI2Q9BXS1 227 aa14.13□□□□□ -0.15
TTC28-206ENST00000480563 USP44Q9H0E7 712 aa14.13□□□□□ -0.15
TTC28-206ENST00000480563 GNL3LQ9NVN8 582 aaKnown RBP14.13□□□□□ -0.15
TTC28-206ENST00000480563 TRIM75PA6NK02 468 aa14.12□□□□□ -0.15
TTC28-206ENST00000480563 CTNND1O60716 968 aaKnown RBP14.12□□□□□ -0.15
TTC28-206ENST00000480563 BMP8BP34820 402 aa14.12□□□□□ -0.15
TTC28-206ENST00000480563 MAP3K10Q02779 954 aa14.12□□□□□ -0.15
TTC28-206ENST00000480563 SH3BP5LQ7L8J4 393 aa14.12□□□□□ -0.15
TTC28-206ENST00000480563 ATG9AQ7Z3C6 839 aa14.12□□□□□ -0.15
TTC28-206ENST00000480563 ANKRD13CQ8N6S4 541 aa14.12□□□□□ -0.15
TTC28-206ENST00000480563 DIS3LQ8TF46 1054 aaKnown RBP14.12□□□□□ -0.15
TTC28-206ENST00000480563 GDF15Q99988 308 aa14.12□□□□□ -0.15
TTC28-206ENST00000480563 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.12□□□□□ -0.15
TTC28-206ENST00000480563 SLURP2P0DP57 97 aa14.11□□□□□ -0.15
TTC28-206ENST00000480563 MNX1P50219 401 aaPredicted RBP14.11□□□□□ -0.15
TTC28-206ENST00000480563 C7orf61Q8IZ16 206 aa14.11□□□□□ -0.15
TTC28-206ENST00000480563 MRPL50Q8N5N7 158 aaKnown RBP14.11□□□□□ -0.15
TTC28-206ENST00000480563 AGTPBP1Q9UPW5 1226 aa14.11□□□□□ -0.15
TTC28-206ENST00000480563 AK9Q5TCS8 1911 aa14.11□□□□□ -0.15
TTC28-206ENST00000480563 SALL1Q9NSC2 1324 aa14.11□□□□□ -0.15
TTC28-206ENST00000480563 A0A0C4DFX4 3053 aa14.1□□□□□ -0.15
TTC28-206ENST00000480563 DDTLA6NHG4 134 aaPredicted RBP14.1□□□□□ -0.15
TTC28-206ENST00000480563 SEMA3EO15041 775 aa14.1□□□□□ -0.15
TTC28-206ENST00000480563 ATP2B3Q16720 1220 aa14.1□□□□□ -0.15
TTC28-206ENST00000480563 GPR153Q6NV75 609 aa14.1□□□□□ -0.15
TTC28-206ENST00000480563 CCDC84Q86UT8 332 aaPredicted RBP14.1□□□□□ -0.15
TTC28-206ENST00000480563 ANKLE1Q8NAG6 615 aa14.1□□□□□ -0.15
TTC28-206ENST00000480563 DENND2AQ9ULE3 1009 aa14.1□□□□□ -0.15
TTC28-206ENST00000480563 ZMYND8Q9ULU4 1186 aaPredicted RBP14.1□□□□□ -0.15
TTC28-206ENST00000480563 MGAMO43451 1857 aa14.1□□□□□ -0.15
TTC28-206ENST00000480563 PHKA1P46020 1223 aa14.09□□□□□ -0.15
TTC28-206ENST00000480563 FAM110CQ1W6H9 321 aa14.09□□□□□ -0.15
TTC28-206ENST00000480563 TREML2Q5T2D2 321 aa14.09□□□□□ -0.15
TTC28-206ENST00000480563 DEFB123Q8N688 67 aa14.09□□□□□ -0.15
TTC28-206ENST00000480563 NBPF3Q9H094 633 aa14.09□□□□□ -0.15
TTC28-206ENST00000480563 CEP126Q9P2H0 1117 aa14.09□□□□□ -0.15
TTC28-206ENST00000480563 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.09□□□□□ -0.15
TTC28-206ENST00000480563 PNMA3Q9UL41 463 aa14.09□□□□□ -0.15
TTC28-206ENST00000480563 GAKO14976 1311 aa14.09□□□□□ -0.15
TTC28-206ENST00000480563 PTPRCP08575 1304 aa14.09□□□□□ -0.15
TTC28-206ENST00000480563 HMGCRP04035 888 aa14.08□□□□□ -0.16
TTC28-206ENST00000480563 PICALMQ13492 652 aa14.08□□□□□ -0.16
TTC28-206ENST00000480563 Q7L0L9 218 aa14.08□□□□□ -0.16
TTC28-206ENST00000480563 ZGPATQ8N5A5 531 aaKnown RBP14.08□□□□□ -0.16
TTC28-206ENST00000480563 SIL1Q9H173 461 aa14.08□□□□□ -0.16
TTC28-206ENST00000480563 HMX1Q9NP08 348 aaPredicted RBP14.08□□□□□ -0.16
TTC28-206ENST00000480563 DDX4Q9NQI0 724 aaKnown RBP14.08□□□□□ -0.16
TTC28-206ENST00000480563 FBXO3Q9UK99 471 aa14.08□□□□□ -0.16
TTC28-206ENST00000480563 CIAO1O76071 339 aa14.07□□□□□ -0.16
TTC28-206ENST00000480563 SYN1P17600 705 aa14.07□□□□□ -0.16
TTC28-206ENST00000480563 GCLCP48506 637 aaPredicted RBP14.07□□□□□ -0.16
TTC28-206ENST00000480563 TRIM32Q13049 653 aa14.07□□□□□ -0.16
TTC28-206ENST00000480563 SPP2Q13103 211 aa14.07□□□□□ -0.16
TTC28-206ENST00000480563 LRIT3Q3SXY7 679 aa14.07□□□□□ -0.16
TTC28-206ENST00000480563 DZIP1Q86YF9 867 aaKnown RBP14.07□□□□□ -0.16
TTC28-206ENST00000480563 SLF2Q8IX21 1173 aa14.07□□□□□ -0.16
TTC28-206ENST00000480563 PROCA1Q8NCQ7 364 aaPredicted RBP14.07□□□□□ -0.16
TTC28-206ENST00000480563 FAM163AQ96GL9 167 aaPredicted RBP14.07□□□□□ -0.16
TTC28-206ENST00000480563 C11orf49Q9H6J7 331 aa14.07□□□□□ -0.16
TTC28-206ENST00000480563 ABCF2Q9UG63 623 aa14.07□□□□□ -0.16
TTC28-206ENST00000480563 GJD2Q9UKL4 321 aa14.07□□□□□ -0.16
TTC28-206ENST00000480563 RPTORQ8N122 1335 aa14.07□□□□□ -0.16
TTC28-206ENST00000480563 COL6A3P12111 3177 aa14.07□□□□□ -0.16
TTC28-206ENST00000480563 RFX7Q2KHR2 1363 aa14.07□□□□□ -0.16
TTC28-206ENST00000480563 TBC1D12O60347 775 aa14.06□□□□□ -0.16
TTC28-206ENST00000480563 BTDP43251 543 aa14.06□□□□□ -0.16
TTC28-206ENST00000480563 MAGEA10P43363 369 aaPredicted RBP14.06□□□□□ -0.16
TTC28-206ENST00000480563 CCDC102BQ68D86 513 aa14.06□□□□□ -0.16
TTC28-206ENST00000480563 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.06□□□□□ -0.16
TTC28-206ENST00000480563 STXBP5LQ9Y2K9 1186 aa14.06□□□□□ -0.16
TTC28-206ENST00000480563 LAMA3Q16787 3333 aa14.06□□□□□ -0.16
TTC28-206ENST00000480563 FAM196BA6NMK8 535 aa14.05□□□□□ -0.16
TTC28-206ENST00000480563 ZBTB22O15209 634 aa14.05□□□□□ -0.16
TTC28-206ENST00000480563 ADORA1P30542 326 aa14.05□□□□□ -0.16
TTC28-206ENST00000480563 IL15P40933 162 aaPredicted RBP14.05□□□□□ -0.16
TTC28-206ENST00000480563 PABPC4Q13310 644 aaKnown RBP eCLIP14.05□□□□□ -0.16
TTC28-206ENST00000480563 SPTY2D1Q68D10 685 aaPredicted RBP14.05□□□□□ -0.16
TTC28-206ENST00000480563 TDHQ8IZJ6 230 aa14.05□□□□□ -0.16
TTC28-206ENST00000480563 ZNF280CQ8ND82 737 aa14.05□□□□□ -0.16
TTC28-206ENST00000480563 SSH1Q8WYL5 1049 aa14.05□□□□□ -0.16
TTC28-206ENST00000480563 MTMR10Q9NXD2 777 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms