RNA–Protein interactions for RNA: ENST00000480393.5

TNFRSF25-213, Transcript of TNF receptor superfamily member 25, human

TSL 1 (best)

Gene TNFRSF25, Length 1,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNFRSF25-213	ENST00000480393	MROH7-TTC4	A0A0A0MT08	1334 aa		32.64	■■■□□ 2.82
TNFRSF25-213	ENST00000480393	ERICH2	A1L162	156 aa		32.63	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	CPLX1	O14810	134 aa		32.63	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	NCL	P19338	710 aa	Known RBP	32.63	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	RAB11FIP4	Q86YS3	637 aa		32.63	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	ESR2	Q92731	530 aa		32.63	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	EYA3	Q99504	573 aa		32.63	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	ARPP21	Q9UBL0	812 aa	Predicted RBP	32.63	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	CYP2D7	A0A087X1C5	515 aa		32.63	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	LIFR	P42702	1097 aa		32.63	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	FAM205A	Q6ZU69	1335 aa		32.62	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	BAZ2A	Q9UIF9	1905 aa	Known RBP	32.62	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	CCDC69	A6NI79	296 aa		32.62	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	USP17L12	C9JPN9	530 aa		32.62	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	USP17L21	D6R901	530 aa		32.62	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	PC	P11498	1178 aa	Known RBP	32.62	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	USP5	P45974	858 aa		32.62	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	METAP2	P50579	478 aa	Known RBP eCLIP	32.62	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	SGMS1	Q86VZ5	419 aa		32.62	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	CERS3	Q8IU89	383 aa		32.62	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	SLF2	Q8IX21	1173 aa		32.62	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	MTA3	Q9BTC8	594 aa		32.62	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	LAMB1	P07942	1786 aa		32.61	■■■□□ 2.81
TNFRSF25-213	ENST00000480393		G3V3G9	751 aa		32.61	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	SLC3A2	P08195	630 aa	Known RBP	32.61	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	DCAF8	Q5TAQ9	597 aa		32.61	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	APOA5	Q6Q788	366 aa		32.61	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	FERMT3	Q86UX7	667 aa		32.61	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	FBXW7	Q969H0	707 aa		32.61	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	CNPY2	Q9Y2B0	182 aa		32.61	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	GTF2I	P78347	998 aa		32.6	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	CNKSR1	Q969H4	720 aa		32.6	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	UBAC1	Q9BSL1	405 aa		32.6	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	CHRNA5	P30532	468 aa		32.6	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	WTAP	Q15007	396 aa		32.6	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	SYNE3	Q6ZMZ3	975 aa		32.6	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	32.6	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	GDPD2	Q9HCC8	539 aa		32.6	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	ZBTB43	O43298	467 aa		32.59	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	MBD3	O95983	291 aa		32.59	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	PPP4C	P60510	307 aa		32.59	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	CSPP1	Q1MSJ5	1256 aa		32.59	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	SENP2	Q9HC62	589 aa		32.59	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	SLC12A7	Q9Y666	1083 aa		32.59	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	SBK1	Q52WX2	424 aa		32.58	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	USP48	Q86UV5	1035 aa		32.58	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	MICU3	Q86XE3	530 aa		32.58	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	TMEM87A	Q8NBN3	555 aa		32.58	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	ZKSCAN3	Q9BRR0	538 aa		32.58	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	RTFDC1	Q9BY42	306 aa	Predicted RBP	32.58	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	MCM9	Q9NXL9	1143 aa		32.58	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	GOLGA8A	A7E2F4	631 aa		32.57	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	FOSB	P53539	338 aa		32.57	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	DNM1	Q05193	864 aa	Known RBP	32.57	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	CPLX2	Q6PUV4	134 aa	Known RBP	32.57	■■■□□ 2.81
TNFRSF25-213	ENST00000480393	CDKL5	O76039	1030 aa		32.57	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	BTD	P43251	543 aa		32.57	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	MYH2	Q9UKX2	1941 aa		32.57	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	SMIM22	K7EJ46	135 aa		32.56	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	PPFIA3	O75145	1194 aa		32.56	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	DOK7	Q18PE1	504 aa		32.56	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	AMOTL1	Q8IY63	956 aa		32.56	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	TMTC2	Q8N394	836 aa		32.56	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	FIBP	O43427	364 aa		32.55	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	RANBP6	O60518	1105 aa	Known RBP	32.55	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	GPT2	Q8TD30	523 aa		32.55	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	ZNF219	Q9P2Y4	722 aa	Predicted RBP	32.55	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	PLCG2	P16885	1265 aa		32.54	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	RXRA	P19793	462 aa		32.54	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	FGR	P09769	529 aa		32.54	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	CYP2D6	P10635	497 aa		32.54	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	KRT85	P78386	507 aa		32.54	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	PDGFD	Q9GZP0	370 aa	Predicted RBP	32.54	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	ORC3	Q9UBD5	711 aa	Predicted RBP	32.54	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	SUGT1	Q9Y2Z0	365 aa		32.54	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	GPR75-ASB3	A0A0A6YYF3	556 aa		32.53	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	PRDM1	O75626	825 aa		32.53	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	PDE4B	Q07343	736 aa		32.53	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	CAVIN1	Q6NZI2	390 aa	Known RBP	32.53	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	32.53	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	32.53	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	TNKS	O95271	1327 aa		32.52	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	ORC4	O43929	436 aa		32.52	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	FDPS	P14324	419 aa	Known RBP	32.52	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	REST	Q13127	1097 aa		32.52	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	CCDC144CP	Q8IYA2	1237 aa		32.52	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	TGFBRAP1	Q8WUH2	860 aa		32.52	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	MYL10	Q9BUA6	226 aa		32.52	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	SLX4	Q8IY92	1834 aa		32.52	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	NAV1	Q8NEY1	1877 aa		32.52	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	C10orf71	Q711Q0	1435 aa		32.52	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	USP17L8	P0C7I0	530 aa		32.51	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	IQCA1	Q86XH1	822 aa		32.51	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	FAM163A	Q96GL9	167 aa	Predicted RBP	32.51	■■■□□ 2.8
TNFRSF25-213	ENST00000480393	GAK	O14976	1311 aa		32.51	■■■□□ 2.79
TNFRSF25-213	ENST00000480393	TEX11	Q8IYF3	940 aa		32.51	■■■□□ 2.79
TNFRSF25-213	ENST00000480393	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	32.51	■■■□□ 2.79
TNFRSF25-213	ENST00000480393	MKRN1	Q9UHC7	482 aa	Known RBP	32.51	■■■□□ 2.79
TNFRSF25-213	ENST00000480393	NID2	Q14112	1375 aa		32.5	■■■□□ 2.79
TNFRSF25-213	ENST00000480393	ADD1	P35611	737 aa	Known RBP	32.5	■■■□□ 2.79

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms