RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 CDK5RAP2Q96SN8 1893 aa20.87■□□□□ 0.93
UPF3A-206ENST00000480362 FLT1P17948 1338 aa20.86■□□□□ 0.93
UPF3A-206ENST00000480362 SPDYE2BA6NHP3 402 aa20.86■□□□□ 0.93
UPF3A-206ENST00000480362 SPDYE6P0CI01 402 aa20.86■□□□□ 0.93
UPF3A-206ENST00000480362 CYP2D6P10635 497 aa20.86■□□□□ 0.93
UPF3A-206ENST00000480362 CPA1P15085 419 aa20.86■□□□□ 0.93
UPF3A-206ENST00000480362 PICALMQ13492 652 aa20.86■□□□□ 0.93
UPF3A-206ENST00000480362 TBC1D10CQ8IV04 446 aa20.86■□□□□ 0.93
UPF3A-206ENST00000480362 MICALL2Q8IY33 904 aa20.86■□□□□ 0.93
UPF3A-206ENST00000480362 MYOZ2Q9NPC6 264 aa20.86■□□□□ 0.93
UPF3A-206ENST00000480362 SAP30BPQ9UHR5 308 aaKnown RBP20.86■□□□□ 0.93
UPF3A-206ENST00000480362 ANAPC4Q9UJX5 808 aa20.86■□□□□ 0.93
UPF3A-206ENST00000480362 LAMA4Q16363 1823 aa20.85■□□□□ 0.93
UPF3A-206ENST00000480362 SMIM22K7EJ46 135 aa20.85■□□□□ 0.93
UPF3A-206ENST00000480362 BLOC1S2Q6QNY1 142 aa20.85■□□□□ 0.93
UPF3A-206ENST00000480362 RUFY3Q7L099 469 aa20.85■□□□□ 0.93
UPF3A-206ENST00000480362 ZBED3Q96IU2 234 aaPredicted RBP20.85■□□□□ 0.93
UPF3A-206ENST00000480362 DDX4Q9NQI0 724 aaKnown RBP20.85■□□□□ 0.93
UPF3A-206ENST00000480362 CYP46A1Q9Y6A2 500 aa20.85■□□□□ 0.93
UPF3A-206ENST00000480362 TIAM2Q8IVF5 1701 aa20.84■□□□□ 0.93
UPF3A-206ENST00000480362 ECM29Q5VYK3 1845 aa20.84■□□□□ 0.93
UPF3A-206ENST00000480362 POLR3DP05423 398 aaPredicted RBP20.84■□□□□ 0.93
UPF3A-206ENST00000480362 CACNB3P54284 484 aa20.84■□□□□ 0.93
UPF3A-206ENST00000480362 NFIAQ12857 509 aa20.84■□□□□ 0.93
UPF3A-206ENST00000480362 COL9A3Q14050 684 aaPredicted RBP20.84■□□□□ 0.93
UPF3A-206ENST00000480362 AKNAD1Q5T1N1 836 aa20.84■□□□□ 0.93
UPF3A-206ENST00000480362 C12orf60Q5U649 245 aa20.84■□□□□ 0.93
UPF3A-206ENST00000480362 AMOTL1Q8IY63 956 aa20.84■□□□□ 0.93
UPF3A-206ENST00000480362 STK11IPQ8N1F8 1099 aa20.84■□□□□ 0.93
UPF3A-206ENST00000480362 STAG1Q8WVM7 1258 aa20.84■□□□□ 0.93
UPF3A-206ENST00000480362 IDI2Q9BXS1 227 aa20.84■□□□□ 0.93
UPF3A-206ENST00000480362 INCENPQ9NQS7 918 aa20.84■□□□□ 0.93
UPF3A-206ENST00000480362 TACC3Q9Y6A5 838 aa20.84■□□□□ 0.93
UPF3A-206ENST00000480362 NAV1Q8NEY1 1877 aa20.84■□□□□ 0.93
UPF3A-206ENST00000480362 FOCADQ5VW36 1801 aa20.83■□□□□ 0.93
UPF3A-206ENST00000480362 H7C1D1 291 aa20.83■□□□□ 0.93
UPF3A-206ENST00000480362 ST18O60284 1047 aa20.83■□□□□ 0.93
UPF3A-206ENST00000480362 DDNO94850 711 aaPredicted RBP20.83■□□□□ 0.93
UPF3A-206ENST00000480362 HMGB1P09429 215 aaKnown RBP20.83■□□□□ 0.93
UPF3A-206ENST00000480362 RPS6KB1P23443 525 aa20.83■□□□□ 0.93
UPF3A-206ENST00000480362 EVX2Q03828 476 aa20.83■□□□□ 0.93
UPF3A-206ENST00000480362 SLC4A8Q2Y0W8 1093 aa20.83■□□□□ 0.93
UPF3A-206ENST00000480362 RBM26Q5T8P6 1007 aaKnown RBP20.83■□□□□ 0.93
UPF3A-206ENST00000480362 MFSD6Q6ZSS7 791 aa20.83■□□□□ 0.93
UPF3A-206ENST00000480362 IL27Q8NEV9 243 aa20.83■□□□□ 0.93
UPF3A-206ENST00000480362 NCOA7Q8NI08 942 aa20.83■□□□□ 0.93
UPF3A-206ENST00000480362 SNX21Q969T3 373 aa20.83■□□□□ 0.93
UPF3A-206ENST00000480362 PDRG1Q9NUG6 133 aa20.83■□□□□ 0.93
UPF3A-206ENST00000480362 ZNF70Q9UC06 446 aaPredicted RBP20.83■□□□□ 0.93
UPF3A-206ENST00000480362 WNT10BO00744 389 aa20.82■□□□□ 0.92
UPF3A-206ENST00000480362 CD2BP2O95400 341 aaKnown RBP20.82■□□□□ 0.92
UPF3A-206ENST00000480362 TRDNQ13061 729 aa20.82■□□□□ 0.92
UPF3A-206ENST00000480362 SAMD7Q7Z3H4 446 aa20.82■□□□□ 0.92
UPF3A-206ENST00000480362 RALYLQ86SE5 291 aaKnown RBP20.82■□□□□ 0.92
UPF3A-206ENST00000480362 TTC14Q96N46 770 aa20.82■□□□□ 0.92
UPF3A-206ENST00000480362 OSBPL5Q9H0X9 879 aaPredicted RBP20.82■□□□□ 0.92
UPF3A-206ENST00000480362 RNF41Q9H4P4 317 aaPredicted RBP20.82■□□□□ 0.92
UPF3A-206ENST00000480362 GPRC5DQ9NZD1 345 aa20.82■□□□□ 0.92
UPF3A-206ENST00000480362 TMOD2Q9NZR1 351 aa20.82■□□□□ 0.92
UPF3A-206ENST00000480362 SRCAPQ6ZRS2 3230 aa20.81■□□□□ 0.92
UPF3A-206ENST00000480362 CLRN2A0PK11 232 aa20.81■□□□□ 0.92
UPF3A-206ENST00000480362 NPM3O75607 178 aaKnown RBP20.81■□□□□ 0.92
UPF3A-206ENST00000480362 SLC3A2P08195 630 aaKnown RBP20.81■□□□□ 0.92
UPF3A-206ENST00000480362 NBPF9Q3BBW0 867 aa20.81■□□□□ 0.92
UPF3A-206ENST00000480362 SPDYE2Q495Y8 402 aa20.81■□□□□ 0.92
UPF3A-206ENST00000480362 DPY19L2Q6NUT2 758 aa20.81■□□□□ 0.92
UPF3A-206ENST00000480362 DHX32Q7L7V1 743 aaKnown RBP20.81■□□□□ 0.92
UPF3A-206ENST00000480362 TBC1D2Q9BYX2 928 aa20.81■□□□□ 0.92
UPF3A-206ENST00000480362 FAM198AQ9UFP1 575 aa20.81■□□□□ 0.92
UPF3A-206ENST00000480362 NEDD4P46934 1319 aa20.8■□□□□ 0.92
UPF3A-206ENST00000480362 MYH1P12882 1939 aa20.8■□□□□ 0.92
UPF3A-206ENST00000480362 MYO1BO43795 1136 aa20.8■□□□□ 0.92
UPF3A-206ENST00000480362 EGFRP00533 1210 aa20.8■□□□□ 0.92
UPF3A-206ENST00000480362 PLCD1P51178 756 aa20.8■□□□□ 0.92
UPF3A-206ENST00000480362 EXOSC10Q01780 885 aaKnown RBP20.8■□□□□ 0.92
UPF3A-206ENST00000480362 TCP10Q12799 353 aa20.8■□□□□ 0.92
UPF3A-206ENST00000480362 BECN1Q14457 450 aa20.8■□□□□ 0.92
UPF3A-206ENST00000480362 TBC1D10BQ4KMP7 808 aaPredicted RBP20.8■□□□□ 0.92
UPF3A-206ENST00000480362 TTC6Q86TZ1 520 aa20.8■□□□□ 0.92
UPF3A-206ENST00000480362 ZFPM1Q8IX07 1006 aa20.8■□□□□ 0.92
UPF3A-206ENST00000480362 TCEANC2Q96MN5 208 aa20.8■□□□□ 0.92
UPF3A-206ENST00000480362 IPO9Q96P70 1041 aaKnown RBP20.8■□□□□ 0.92
UPF3A-206ENST00000480362 KRT23Q9C075 422 aa20.8■□□□□ 0.92
UPF3A-206ENST00000480362 CNNM2Q9H8M5 875 aa20.8■□□□□ 0.92
UPF3A-206ENST00000480362 TOMM22Q9NS69 142 aa20.8■□□□□ 0.92
UPF3A-206ENST00000480362 LAMB1P07942 1786 aa20.8■□□□□ 0.92
UPF3A-206ENST00000480362 DDX60LQ5H9U9 1706 aaKnown RBP20.79■□□□□ 0.92
UPF3A-206ENST00000480362 B4E1Z4 1266 aa20.79■□□□□ 0.92
UPF3A-206ENST00000480362 TCP10L2B9ZVM9 353 aa20.79■□□□□ 0.92
UPF3A-206ENST00000480362 ENTPD3O75355 529 aa20.79■□□□□ 0.92
UPF3A-206ENST00000480362 FGRP09769 529 aa20.79■□□□□ 0.92
UPF3A-206ENST00000480362 KIF4BQ2VIQ3 1234 aa20.79■□□□□ 0.92
UPF3A-206ENST00000480362 HSCBQ8IWL3 235 aa20.79■□□□□ 0.92
UPF3A-206ENST00000480362 MB21D2Q8IYB1 491 aaPredicted RBP20.79■□□□□ 0.92
UPF3A-206ENST00000480362 DYNLL2Q96FJ2 89 aa20.79■□□□□ 0.92
UPF3A-206ENST00000480362 PCP11498 1178 aaKnown RBP20.78■□□□□ 0.92
UPF3A-206ENST00000480362 MCM5P33992 734 aa20.78■□□□□ 0.92
UPF3A-206ENST00000480362 EPS15P42566 896 aa20.78■□□□□ 0.92
UPF3A-206ENST00000480362 AK2P54819 239 aa20.78■□□□□ 0.92
UPF3A-206ENST00000480362 PDE4BQ07343 736 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms