RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 INHAP05111 366 aa8.79□□□□□ -1
COL17A1-205ENST00000480127 PRDX5P30044 214 aa8.79□□□□□ -1
COL17A1-205ENST00000480127 SLFN5Q08AF3 891 aa8.79□□□□□ -1
COL17A1-205ENST00000480127 IRF5Q13568 498 aa8.79□□□□□ -1
COL17A1-205ENST00000480127 DIXDC1Q155Q3 683 aa8.79□□□□□ -1
COL17A1-205ENST00000480127 PRRT2Q7Z6L0 340 aaPredicted RBP8.79□□□□□ -1
COL17A1-205ENST00000480127 WDR66Q8TBY9 1149 aa8.79□□□□□ -1
COL17A1-205ENST00000480127 PXYLP1Q8TE99 480 aa8.79□□□□□ -1
COL17A1-205ENST00000480127 CDCA7LQ96GN5 454 aa8.79□□□□□ -1
COL17A1-205ENST00000480127 CRISPLD2Q9H0B8 497 aa8.79□□□□□ -1
COL17A1-205ENST00000480127 PAK6Q9NQU5 681 aaPredicted RBP8.79□□□□□ -1
COL17A1-205ENST00000480127 USP40Q9NVE5 1235 aa8.79□□□□□ -1
COL17A1-205ENST00000480127 STAP2Q9UGK3 403 aa8.79□□□□□ -1
COL17A1-205ENST00000480127 AFG3L2Q9Y4W6 797 aa8.79□□□□□ -1
COL17A1-205ENST00000480127 ZHX2Q9Y6X8 837 aa8.79□□□□□ -1
COL17A1-205ENST00000480127 RANBP2P49792 3224 aaKnown RBP8.78□□□□□ -1
COL17A1-205ENST00000480127 TFRCP02786 760 aaKnown RBP8.78□□□□□ -1
COL17A1-205ENST00000480127 CT47B1P0C2W7 299 aaPredicted RBP8.78□□□□□ -1
COL17A1-205ENST00000480127 SLURP2P0DP57 97 aa8.78□□□□□ -1
COL17A1-205ENST00000480127 CAPN2P17655 700 aa8.78□□□□□ -1
COL17A1-205ENST00000480127 PTPRAP18433 802 aa8.78□□□□□ -1
COL17A1-205ENST00000480127 RFX5P48382 616 aaPredicted RBP8.78□□□□□ -1
COL17A1-205ENST00000480127 OS9Q13438 667 aaPredicted RBP8.78□□□□□ -1
COL17A1-205ENST00000480127 SH3BP5LQ7L8J4 393 aa8.78□□□□□ -1
COL17A1-205ENST00000480127 FASTKD5Q7L8L6 764 aaKnown RBP8.78□□□□□ -1
COL17A1-205ENST00000480127 SCYL3Q8IZE3 742 aa8.78□□□□□ -1
COL17A1-205ENST00000480127 LPIN2Q92539 896 aa8.78□□□□□ -1
COL17A1-205ENST00000480127 DEFB118Q96PH6 123 aa8.78□□□□□ -1
COL17A1-205ENST00000480127 NOB1Q9ULX3 412 aaKnown RBP8.78□□□□□ -1
COL17A1-205ENST00000480127 MGAMO43451 1857 aa8.78□□□□□ -1
COL17A1-205ENST00000480127 EYA2O00167 538 aa8.77□□□□□ -1.01
COL17A1-205ENST00000480127 TNPO2O14787 897 aaKnown RBP8.77□□□□□ -1.01
COL17A1-205ENST00000480127 GNAI3P08754 354 aa8.77□□□□□ -1.01
COL17A1-205ENST00000480127 MAP3K10Q02779 954 aa8.77□□□□□ -1.01
COL17A1-205ENST00000480127 ATP2B3Q16720 1220 aa8.77□□□□□ -1.01
COL17A1-205ENST00000480127 ATG9AQ7Z3C6 839 aa8.77□□□□□ -1.01
COL17A1-205ENST00000480127 DZIP1Q86YF9 867 aaKnown RBP8.77□□□□□ -1.01
COL17A1-205ENST00000480127 FTSJ3Q8IY81 847 aaKnown RBP8.77□□□□□ -1.01
COL17A1-205ENST00000480127 DIS3LQ8TF46 1054 aaKnown RBP8.77□□□□□ -1.01
COL17A1-205ENST00000480127 PAWRQ96IZ0 340 aaKnown RBP8.77□□□□□ -1.01
COL17A1-205ENST00000480127 GDF15Q99988 308 aa8.77□□□□□ -1.01
COL17A1-205ENST00000480127 IDI2Q9BXS1 227 aa8.77□□□□□ -1.01
COL17A1-205ENST00000480127 USP44Q9H0E7 712 aa8.77□□□□□ -1.01
COL17A1-205ENST00000480127 SLC45A1Q9Y2W3 748 aa8.77□□□□□ -1.01
COL17A1-205ENST00000480127 LRRFIP2Q9Y608 721 aaKnown RBP8.77□□□□□ -1.01
COL17A1-205ENST00000480127 RFX7Q2KHR2 1363 aa8.76□□□□□ -1.01
COL17A1-205ENST00000480127 CCER2I3L3R5 266 aa8.76□□□□□ -1.01
COL17A1-205ENST00000480127 ENTPD3O75355 529 aa8.76□□□□□ -1.01
COL17A1-205ENST00000480127 LDHBP07195 334 aaKnown RBP8.76□□□□□ -1.01
COL17A1-205ENST00000480127 BMP8BP34820 402 aa8.76□□□□□ -1.01
COL17A1-205ENST00000480127 RGS3P49796 1198 aa8.76□□□□□ -1.01
COL17A1-205ENST00000480127 MNX1P50219 401 aaPredicted RBP8.76□□□□□ -1.01
COL17A1-205ENST00000480127 GADL1Q6ZQY3 521 aa8.76□□□□□ -1.01
COL17A1-205ENST00000480127 ZSCAN29Q8IWY8 852 aaPredicted RBP8.76□□□□□ -1.01
COL17A1-205ENST00000480127 SLF2Q8IX21 1173 aa8.76□□□□□ -1.01
COL17A1-205ENST00000480127 ANKRD13CQ8N6S4 541 aa8.76□□□□□ -1.01
COL17A1-205ENST00000480127 NEUROD6Q96NK8 337 aa8.76□□□□□ -1.01
COL17A1-205ENST00000480127 PICK1Q9NRD5 415 aa8.76□□□□□ -1.01
COL17A1-205ENST00000480127 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.76□□□□□ -1.01
COL17A1-205ENST00000480127 ZNF521Q96K83 1311 aa8.76□□□□□ -1.01
COL17A1-205ENST00000480127 SALL1Q9NSC2 1324 aa8.76□□□□□ -1.01
COL17A1-205ENST00000480127 DDTLA6NHG4 134 aaPredicted RBP8.75□□□□□ -1.01
COL17A1-205ENST00000480127 TRIM75PA6NK02 468 aa8.75□□□□□ -1.01
COL17A1-205ENST00000480127 SRGAP3O43295 1099 aa8.75□□□□□ -1.01
COL17A1-205ENST00000480127 CTNND1O60716 968 aaKnown RBP8.75□□□□□ -1.01
COL17A1-205ENST00000480127 IL15P40933 162 aaPredicted RBP8.75□□□□□ -1.01
COL17A1-205ENST00000480127 GPR153Q6NV75 609 aa8.75□□□□□ -1.01
COL17A1-205ENST00000480127 NECAB2Q7Z6G3 386 aa8.75□□□□□ -1.01
COL17A1-205ENST00000480127 CCDC84Q86UT8 332 aaPredicted RBP8.75□□□□□ -1.01
COL17A1-205ENST00000480127 ZGPATQ8N5A5 531 aaKnown RBP8.75□□□□□ -1.01
COL17A1-205ENST00000480127 SMCR8Q8TEV9 937 aaPredicted RBP8.75□□□□□ -1.01
COL17A1-205ENST00000480127 NOL10Q9BSC4 688 aaKnown RBP8.75□□□□□ -1.01
COL17A1-205ENST00000480127 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.75□□□□□ -1.01
COL17A1-205ENST00000480127 DDX4Q9NQI0 724 aaKnown RBP8.75□□□□□ -1.01
COL17A1-205ENST00000480127 ABCF2Q9UG63 623 aa8.75□□□□□ -1.01
COL17A1-205ENST00000480127 AGTPBP1Q9UPW5 1226 aa8.75□□□□□ -1.01
COL17A1-205ENST00000480127 AKAP2Q9Y2D5 859 aa8.75□□□□□ -1.01
COL17A1-205ENST00000480127 ALPK3Q96L96 1907 aa8.75□□□□□ -1.01
COL17A1-205ENST00000480127 GAKO14976 1311 aa8.75□□□□□ -1.01
COL17A1-205ENST00000480127 ZBTB22O15209 634 aa8.74□□□□□ -1.01
COL17A1-205ENST00000480127 PHKA1P46020 1223 aa8.74□□□□□ -1.01
COL17A1-205ENST00000480127 HNRNPUQ00839 825 aaKnown RBP eCLIP8.74□□□□□ -1.01
COL17A1-205ENST00000480127 TRIM32Q13049 653 aa8.74□□□□□ -1.01
COL17A1-205ENST00000480127 G3BP1Q13283 466 aaKnown RBP eCLIP8.74□□□□□ -1.01
COL17A1-205ENST00000480127 FAM110CQ1W6H9 321 aa8.74□□□□□ -1.01
COL17A1-205ENST00000480127 TREML2Q5T2D2 321 aa8.74□□□□□ -1.01
COL17A1-205ENST00000480127 SPTY2D1Q68D10 685 aaPredicted RBP8.74□□□□□ -1.01
COL17A1-205ENST00000480127 Q7L0L9 218 aa8.74□□□□□ -1.01
COL17A1-205ENST00000480127 C7orf61Q8IZ16 206 aa8.74□□□□□ -1.01
COL17A1-205ENST00000480127 ANKLE1Q8NAG6 615 aa8.74□□□□□ -1.01
COL17A1-205ENST00000480127 CLUAP1Q96AJ1 413 aa8.74□□□□□ -1.01
COL17A1-205ENST00000480127 COA7Q96BR5 231 aa8.74□□□□□ -1.01
COL17A1-205ENST00000480127 BCL11AQ9H165 835 aa8.74□□□□□ -1.01
COL17A1-205ENST00000480127 GJD2Q9UKL4 321 aa8.74□□□□□ -1.01
COL17A1-205ENST00000480127 TAOK2Q9UL54 1235 aa8.74□□□□□ -1.01
COL17A1-205ENST00000480127 DENND2AQ9ULE3 1009 aa8.74□□□□□ -1.01
COL17A1-205ENST00000480127 ZMYND8Q9ULU4 1186 aaPredicted RBP8.74□□□□□ -1.01
COL17A1-205ENST00000480127 PA2G4Q9UQ80 394 aaKnown RBP8.74□□□□□ -1.01
COL17A1-205ENST00000480127 PHIPQ8WWQ0 1821 aa8.74□□□□□ -1.01
COL17A1-205ENST00000480127 DOCK2Q92608 1830 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms