RNA–Protein interactions for RNA: ENST00000479955.5

TRAPPC12-219, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-219ENST00000479955 NAPBQ9H115 298 aa14.03□□□□□ -0.16
TRAPPC12-219ENST00000479955 UPF2Q9HAU5 1272 aaKnown RBP14.03□□□□□ -0.16
TRAPPC12-219ENST00000479955 DCP1AQ9NPI6 582 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC12-219ENST00000479955 U3KPZ7 1027 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC12-219ENST00000479955 ADAMTSL1Q8N6G6 1762 aa14.03□□□□□ -0.16
TRAPPC12-219ENST00000479955 ZMYM6O95789 1325 aa14.02□□□□□ -0.17
TRAPPC12-219ENST00000479955 FLT1P17948 1338 aa14.02□□□□□ -0.17
TRAPPC12-219ENST00000479955 TCP10L2B9ZVM9 353 aa14.02□□□□□ -0.17
TRAPPC12-219ENST00000479955 PRKAB2O43741 272 aa14.02□□□□□ -0.17
TRAPPC12-219ENST00000479955 YY1P25490 414 aa14.02□□□□□ -0.17
TRAPPC12-219ENST00000479955 PICALMQ13492 652 aa14.02□□□□□ -0.17
TRAPPC12-219ENST00000479955 LDHDQ86WU2 507 aa14.02□□□□□ -0.17
TRAPPC12-219ENST00000479955 MAPKAPK5Q8IW41 473 aa14.02□□□□□ -0.17
TRAPPC12-219ENST00000479955 SDR42E1Q8WUS8 393 aa14.02□□□□□ -0.17
TRAPPC12-219ENST00000479955 OSBPL5Q9H0X9 879 aaPredicted RBP14.02□□□□□ -0.17
TRAPPC12-219ENST00000479955 NMRK2Q9NPI5 230 aa14.02□□□□□ -0.17
TRAPPC12-219ENST00000479955 MCM9Q9NXL9 1143 aa14.02□□□□□ -0.17
TRAPPC12-219ENST00000479955 GGA3Q9NZ52 723 aa14.02□□□□□ -0.17
TRAPPC12-219ENST00000479955 ARPP21Q9UBL0 812 aaPredicted RBP14.02□□□□□ -0.17
TRAPPC12-219ENST00000479955 FGAP02671 866 aa14.01□□□□□ -0.17
TRAPPC12-219ENST00000479955 POLR3DP05423 398 aaPredicted RBP14.01□□□□□ -0.17
TRAPPC12-219ENST00000479955 HLA-DOAP06340 250 aa14.01□□□□□ -0.17
TRAPPC12-219ENST00000479955 SLC3A2P08195 630 aaKnown RBP14.01□□□□□ -0.17
TRAPPC12-219ENST00000479955 MCCP23508 829 aa14.01□□□□□ -0.17
TRAPPC12-219ENST00000479955 CACNB3P54284 484 aa14.01□□□□□ -0.17
TRAPPC12-219ENST00000479955 TCP10Q12799 353 aa14.01□□□□□ -0.17
TRAPPC12-219ENST00000479955 NFIAQ12857 509 aa14.01□□□□□ -0.17
TRAPPC12-219ENST00000479955 SBK1Q52WX2 424 aa14.01□□□□□ -0.17
TRAPPC12-219ENST00000479955 VPS53Q5VIR6 699 aa14.01□□□□□ -0.17
TRAPPC12-219ENST00000479955 RNF20Q5VTR2 975 aa14.01□□□□□ -0.17
TRAPPC12-219ENST00000479955 CDC37L1Q7L3B6 337 aa14.01□□□□□ -0.17
TRAPPC12-219ENST00000479955 ZSCAN29Q8IWY8 852 aaPredicted RBP14.01□□□□□ -0.17
TRAPPC12-219ENST00000479955 LSG1Q9H089 658 aaKnown RBP14.01□□□□□ -0.17
TRAPPC12-219ENST00000479955 DEFB129Q9H1M3 183 aa14.01□□□□□ -0.17
TRAPPC12-219ENST00000479955 FAM198AQ9UFP1 575 aa14.01□□□□□ -0.17
TRAPPC12-219ENST00000479955 MKRN1Q9UHC7 482 aaKnown RBP14.01□□□□□ -0.17
TRAPPC12-219ENST00000479955 FOCADQ5VW36 1801 aa14.01□□□□□ -0.17
TRAPPC12-219ENST00000479955 COL2A1P02458 1487 aaPredicted RBP14□□□□□ -0.17
TRAPPC12-219ENST00000479955 ZNF213O14771 459 aa14□□□□□ -0.17
TRAPPC12-219ENST00000479955 RASA3Q14644 834 aa14□□□□□ -0.17
TRAPPC12-219ENST00000479955 IMMTQ16891 758 aaKnown RBP14□□□□□ -0.17
TRAPPC12-219ENST00000479955 SUPT20HL1Q3ZLR7 823 aa14□□□□□ -0.17
TRAPPC12-219ENST00000479955 FOXP4Q8IVH2 680 aaPredicted RBP14□□□□□ -0.17
TRAPPC12-219ENST00000479955 BACH2Q9BYV9 841 aa14□□□□□ -0.17
TRAPPC12-219ENST00000479955 IL25Q9H293 177 aa14□□□□□ -0.17
TRAPPC12-219ENST00000479955 ZNF287Q9HBT7 754 aa14□□□□□ -0.17
TRAPPC12-219ENST00000479955 PI4KBQ9UBF8 816 aa14□□□□□ -0.17
TRAPPC12-219ENST00000479955 CDK5RAP2Q96SN8 1893 aa13.99□□□□□ -0.17
TRAPPC12-219ENST00000479955 ATRNL1Q5VV63 1379 aa13.99□□□□□ -0.17
TRAPPC12-219ENST00000479955 USP17L12C9JPN9 530 aa13.99□□□□□ -0.17
TRAPPC12-219ENST00000479955 USP17L21D6R901 530 aa13.99□□□□□ -0.17
TRAPPC12-219ENST00000479955 PTH1RQ03431 593 aa13.99□□□□□ -0.17
TRAPPC12-219ENST00000479955 CTR9Q6PD62 1173 aa13.99□□□□□ -0.17
TRAPPC12-219ENST00000479955 KRT26Q7Z3Y9 468 aa13.99□□□□□ -0.17
TRAPPC12-219ENST00000479955 DDX4Q9NQI0 724 aaKnown RBP13.99□□□□□ -0.17
TRAPPC12-219ENST00000479955 MYH1P12882 1939 aa13.98□□□□□ -0.17
TRAPPC12-219ENST00000479955 ASTN2O75129 1339 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC12-219ENST00000479955 MINDY4BA8MYZ0 360 aa13.98□□□□□ -0.17
TRAPPC12-219ENST00000479955 PCP11498 1178 aaKnown RBP13.98□□□□□ -0.17
TRAPPC12-219ENST00000479955 ZKSCAN1P17029 563 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC12-219ENST00000479955 NT5C2P49902 561 aa13.98□□□□□ -0.17
TRAPPC12-219ENST00000479955 C12orf60Q5U649 245 aa13.98□□□□□ -0.17
TRAPPC12-219ENST00000479955 USP26Q9BXU7 913 aa13.98□□□□□ -0.17
TRAPPC12-219ENST00000479955 TRIM34Q9BYJ4 488 aa13.98□□□□□ -0.17
TRAPPC12-219ENST00000479955 EHD4Q9H223 541 aa13.98□□□□□ -0.17
TRAPPC12-219ENST00000479955 EPB41L4AQ9HCS5 686 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC12-219ENST00000479955 SAP30BPQ9UHR5 308 aaKnown RBP13.98□□□□□ -0.17
TRAPPC12-219ENST00000479955 PALD1Q9ULE6 856 aa13.98□□□□□ -0.17
TRAPPC12-219ENST00000479955 RBM8AQ9Y5S9 174 aaKnown RBP13.98□□□□□ -0.17
TRAPPC12-219ENST00000479955 CNTNAP1P78357 1384 aa13.97□□□□□ -0.17
TRAPPC12-219ENST00000479955 NAV1Q8NEY1 1877 aa13.97□□□□□ -0.17
TRAPPC12-219ENST00000479955 FOXP2O15409 715 aa13.97□□□□□ -0.17
TRAPPC12-219ENST00000479955 NF2P35240 595 aa13.97□□□□□ -0.17
TRAPPC12-219ENST00000479955 PDE4BQ07343 736 aa13.97□□□□□ -0.17
TRAPPC12-219ENST00000479955 PPARAQ07869 468 aa13.97□□□□□ -0.17
TRAPPC12-219ENST00000479955 NECTIN1Q15223 517 aa13.97□□□□□ -0.17
TRAPPC12-219ENST00000479955 CHADLQ6NUI6 762 aa13.97□□□□□ -0.17
TRAPPC12-219ENST00000479955 CRACR2BQ8N4Y2 399 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC12-219ENST00000479955 CSRNP1Q96S65 589 aa13.97□□□□□ -0.17
TRAPPC12-219ENST00000479955 RNF41Q9H4P4 317 aaPredicted RBP13.97□□□□□ -0.17
TRAPPC12-219ENST00000479955 SWAP70Q9UH65 585 aa13.97□□□□□ -0.17
TRAPPC12-219ENST00000479955 HERC5Q9UII4 1024 aaKnown RBP13.97□□□□□ -0.17
TRAPPC12-219ENST00000479955 SERPINB13Q9UIV8 391 aa13.97□□□□□ -0.17
TRAPPC12-219ENST00000479955 ANAPC4Q9UJX5 808 aa13.97□□□□□ -0.17
TRAPPC12-219ENST00000479955 POLR2AP24928 1970 aaKnown RBP13.96□□□□□ -0.17
TRAPPC12-219ENST00000479955 TBC1D12O60347 775 aa13.96□□□□□ -0.17
TRAPPC12-219ENST00000479955 HSPA4P34932 840 aa13.96□□□□□ -0.17
TRAPPC12-219ENST00000479955 KRT32Q14532 448 aa13.96□□□□□ -0.17
TRAPPC12-219ENST00000479955 DCAF15Q66K64 600 aa13.96□□□□□ -0.17
TRAPPC12-219ENST00000479955 USP48Q86UV5 1035 aa13.96□□□□□ -0.17
TRAPPC12-219ENST00000479955 ZFPM1Q8IX07 1006 aa13.96□□□□□ -0.17
TRAPPC12-219ENST00000479955 TMEM39BQ9GZU3 492 aa13.96□□□□□ -0.17
TRAPPC12-219ENST00000479955 BAZ2AQ9UIF9 1905 aaKnown RBP13.96□□□□□ -0.18
TRAPPC12-219ENST00000479955 DDTLA6NHG4 134 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC12-219ENST00000479955 TOMM70O94826 608 aa13.95□□□□□ -0.18
TRAPPC12-219ENST00000479955 SEC24BO95487 1268 aa13.95□□□□□ -0.18
TRAPPC12-219ENST00000479955 PLCD1P51178 756 aa13.95□□□□□ -0.18
TRAPPC12-219ENST00000479955 TRDNQ13061 729 aa13.95□□□□□ -0.18
TRAPPC12-219ENST00000479955 MAP1SQ66K74 1059 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC12-219ENST00000479955 CREB3L3Q68CJ9 461 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms