RNA–Protein interactions for RNA: ENST00000478769.1

NUDCD3-207, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 315 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-207ENST00000478769 SGSM2O43147 1006 aa16.26■□□□□ 0.19
NUDCD3-207ENST00000478769 TNFAIP1Q13829 316 aa16.26■□□□□ 0.19
NUDCD3-207ENST00000478769 RASA3Q14644 834 aa16.26■□□□□ 0.19
NUDCD3-207ENST00000478769 VPS53Q5VIR6 699 aa16.26■□□□□ 0.19
NUDCD3-207ENST00000478769 FAM83AQ86UY5 434 aa16.26■□□□□ 0.19
NUDCD3-207ENST00000478769 SULF1Q8IWU6 871 aa16.26■□□□□ 0.19
NUDCD3-207ENST00000478769 ESYT1Q9BSJ8 1104 aa16.26■□□□□ 0.19
NUDCD3-207ENST00000478769 TMEM39BQ9GZU3 492 aa16.26■□□□□ 0.19
NUDCD3-207ENST00000478769 OSBPL5Q9H0X9 879 aaPredicted RBP16.26■□□□□ 0.19
NUDCD3-207ENST00000478769 DEFB129Q9H1M3 183 aa16.26■□□□□ 0.19
NUDCD3-207ENST00000478769 MKRN1Q9UHC7 482 aaKnown RBP16.26■□□□□ 0.19
NUDCD3-207ENST00000478769 SSC5DA1L4H1 1573 aa16.26■□□□□ 0.19
NUDCD3-207ENST00000478769 GSG1L2A8MUP6 293 aa16.25■□□□□ 0.19
NUDCD3-207ENST00000478769 ENTPD3O75355 529 aa16.25■□□□□ 0.19
NUDCD3-207ENST00000478769 NPM3O75607 178 aaKnown RBP16.25■□□□□ 0.19
NUDCD3-207ENST00000478769 USP5P45974 858 aa16.25■□□□□ 0.19
NUDCD3-207ENST00000478769 SH3BP5LQ7L8J4 393 aa16.25■□□□□ 0.19
NUDCD3-207ENST00000478769 USP48Q86UV5 1035 aa16.25■□□□□ 0.19
NUDCD3-207ENST00000478769 DCP1AQ9NPI6 582 aaPredicted RBP16.25■□□□□ 0.19
NUDCD3-207ENST00000478769 ATRNL1Q5VV63 1379 aa16.25■□□□□ 0.19
NUDCD3-207ENST00000478769 SIPA1L1O43166 1804 aa16.24■□□□□ 0.19
NUDCD3-207ENST00000478769 BAZ2AQ9UIF9 1905 aaKnown RBP16.24■□□□□ 0.19
NUDCD3-207ENST00000478769 TRAF5O00463 557 aa16.24■□□□□ 0.19
NUDCD3-207ENST00000478769 GNAT2P19087 354 aa16.24■□□□□ 0.19
NUDCD3-207ENST00000478769 TNNI2P48788 182 aa16.24■□□□□ 0.19
NUDCD3-207ENST00000478769 PRAMEF18Q5VWM3 479 aa16.24■□□□□ 0.19
NUDCD3-207ENST00000478769 CDC37L1Q7L3B6 337 aa16.24■□□□□ 0.19
NUDCD3-207ENST00000478769 RBM46Q8TBY0 533 aaKnown RBP16.24■□□□□ 0.19
NUDCD3-207ENST00000478769 FAM151AQ8WW52 585 aa16.24■□□□□ 0.19
NUDCD3-207ENST00000478769 RUFY2Q8WXA3 655 aa16.24■□□□□ 0.19
NUDCD3-207ENST00000478769 TEPSINQ96N21 525 aa16.24■□□□□ 0.19
NUDCD3-207ENST00000478769 SAP30BPQ9UHR5 308 aaKnown RBP16.24■□□□□ 0.19
NUDCD3-207ENST00000478769 PPP2R3BQ9Y5P8 575 aa16.24■□□□□ 0.19
NUDCD3-207ENST00000478769 MYH1P12882 1939 aa16.23■□□□□ 0.19
NUDCD3-207ENST00000478769 DDTLA6NHG4 134 aaPredicted RBP16.23■□□□□ 0.19
NUDCD3-207ENST00000478769 TOMM70O94826 608 aa16.23■□□□□ 0.19
NUDCD3-207ENST00000478769 MFAP1P55081 439 aaKnown RBP16.23■□□□□ 0.19
NUDCD3-207ENST00000478769 EVX2Q03828 476 aa16.23■□□□□ 0.19
NUDCD3-207ENST00000478769 FMR1Q06787 632 aaKnown RBP eCLIP16.23■□□□□ 0.19
NUDCD3-207ENST00000478769 SLC4A8Q2Y0W8 1093 aa16.23■□□□□ 0.19
NUDCD3-207ENST00000478769 CASC1Q6TDU7 716 aa16.23■□□□□ 0.19
NUDCD3-207ENST00000478769 SMC1BQ8NDV3 1235 aa16.23■□□□□ 0.19
NUDCD3-207ENST00000478769 CDCA5Q96FF9 252 aa16.23■□□□□ 0.19
NUDCD3-207ENST00000478769 ATP8A2Q9NTI2 1148 aa16.23■□□□□ 0.19
NUDCD3-207ENST00000478769 LAMB1P07942 1786 aa16.23■□□□□ 0.19
NUDCD3-207ENST00000478769 ITGBL1O95965 494 aaPredicted RBP16.22■□□□□ 0.19
NUDCD3-207ENST00000478769 HSPD1P10809 573 aaKnown RBP16.22■□□□□ 0.19
NUDCD3-207ENST00000478769 PALD1Q9ULE6 856 aa16.22■□□□□ 0.19
NUDCD3-207ENST00000478769 PATL2C9JE40 543 aaKnown RBP16.21■□□□□ 0.19
NUDCD3-207ENST00000478769 APPP05067 770 aa16.21■□□□□ 0.19
NUDCD3-207ENST00000478769 CYP2D6P10635 497 aa16.21■□□□□ 0.19
NUDCD3-207ENST00000478769 TDO2P48775 406 aa16.21■□□□□ 0.19
NUDCD3-207ENST00000478769 NBPF12Q5TAG4 269 aaPredicted RBP16.21■□□□□ 0.19
NUDCD3-207ENST00000478769 GIMAP6Q6P9H5 292 aa16.21■□□□□ 0.19
NUDCD3-207ENST00000478769 IFNL3Q8IZI9 196 aa16.21■□□□□ 0.19
NUDCD3-207ENST00000478769 CSRNP1Q96S65 589 aa16.21■□□□□ 0.19
NUDCD3-207ENST00000478769 MCM9Q9NXL9 1143 aa16.21■□□□□ 0.19
NUDCD3-207ENST00000478769 ZMYM6O95789 1325 aa16.2■□□□□ 0.18
NUDCD3-207ENST00000478769 CYP2D7A0A087X1C5 515 aa16.2■□□□□ 0.18
NUDCD3-207ENST00000478769 SMIM22K7EJ46 135 aa16.2■□□□□ 0.18
NUDCD3-207ENST00000478769 SLURP2P0DP57 97 aa16.2■□□□□ 0.18
NUDCD3-207ENST00000478769 PTH1RQ03431 593 aa16.2■□□□□ 0.18
NUDCD3-207ENST00000478769 CTR9Q6PD62 1173 aa16.2■□□□□ 0.18
NUDCD3-207ENST00000478769 ZSCAN29Q8IWY8 852 aaPredicted RBP16.2■□□□□ 0.18
NUDCD3-207ENST00000478769 DSCC1Q9BVC3 393 aa16.2■□□□□ 0.18
NUDCD3-207ENST00000478769 NACAP1Q9BZK3 213 aa16.2■□□□□ 0.18
NUDCD3-207ENST00000478769 LSG1Q9H089 658 aaKnown RBP16.2■□□□□ 0.18
NUDCD3-207ENST00000478769 PASKQ96RG2 1323 aa16.19■□□□□ 0.18
NUDCD3-207ENST00000478769 LAMA4Q16363 1823 aa16.19■□□□□ 0.18
NUDCD3-207ENST00000478769 USP17L12C9JPN9 530 aa16.19■□□□□ 0.18
NUDCD3-207ENST00000478769 USP17L21D6R901 530 aa16.19■□□□□ 0.18
NUDCD3-207ENST00000478769 ALX1Q15699 326 aa16.19■□□□□ 0.18
NUDCD3-207ENST00000478769 C8orf34Q49A92 452 aa16.19■□□□□ 0.18
NUDCD3-207ENST00000478769 DDRGK1Q96HY6 314 aa16.19■□□□□ 0.18
NUDCD3-207ENST00000478769 NAPBQ9H115 298 aa16.19■□□□□ 0.18
NUDCD3-207ENST00000478769 DHX36Q9H2U1 1008 aaKnown RBP16.19■□□□□ 0.18
NUDCD3-207ENST00000478769 ARPP21Q9UBL0 812 aaPredicted RBP16.19■□□□□ 0.18
NUDCD3-207ENST00000478769 PAPPA2Q9BXP8 1791 aa16.18■□□□□ 0.18
NUDCD3-207ENST00000478769 ROBO3Q96MS0 1386 aa16.18■□□□□ 0.18
NUDCD3-207ENST00000478769 FGAP02671 866 aa16.18■□□□□ 0.18
NUDCD3-207ENST00000478769 POLR3DP05423 398 aaPredicted RBP16.18■□□□□ 0.18
NUDCD3-207ENST00000478769 PLCD1P51178 756 aa16.18■□□□□ 0.18
NUDCD3-207ENST00000478769 FSTL1Q12841 308 aa16.18■□□□□ 0.18
NUDCD3-207ENST00000478769 DNAJC18Q9H819 358 aa16.18■□□□□ 0.18
NUDCD3-207ENST00000478769 ANO2Q9NQ90 1003 aa16.18■□□□□ 0.18
NUDCD3-207ENST00000478769 FZD1Q9UP38 647 aa16.18■□□□□ 0.18
NUDCD3-207ENST00000478769 TRPM7Q96QT4 1865 aa16.17■□□□□ 0.18
NUDCD3-207ENST00000478769 FAM196BA6NMK8 535 aa16.17■□□□□ 0.18
NUDCD3-207ENST00000478769 HLA-DOAP06340 250 aa16.17■□□□□ 0.18
NUDCD3-207ENST00000478769 SBK1Q52WX2 424 aa16.17■□□□□ 0.18
NUDCD3-207ENST00000478769 C12orf60Q5U649 245 aa16.17■□□□□ 0.18
NUDCD3-207ENST00000478769 ZNF408Q9H9D4 720 aa16.17■□□□□ 0.18
NUDCD3-207ENST00000478769 OTOFQ9HC10 1997 aa16.17■□□□□ 0.18
NUDCD3-207ENST00000478769 CELF2O95319 508 aaKnown RBP16.16■□□□□ 0.18
NUDCD3-207ENST00000478769 SUPT20HL1Q3ZLR7 823 aa16.16■□□□□ 0.18
NUDCD3-207ENST00000478769 KIAA1211Q6ZU35 1233 aa16.16■□□□□ 0.18
NUDCD3-207ENST00000478769 MIGA2Q7L4E1 593 aa16.16■□□□□ 0.18
NUDCD3-207ENST00000478769 METTL16Q86W50 562 aaKnown RBP16.16■□□□□ 0.18
NUDCD3-207ENST00000478769 DYNLL2Q96FJ2 89 aa16.16■□□□□ 0.18
NUDCD3-207ENST00000478769 EHD4Q9H223 541 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms