RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 REV3LO60673 3130 aa15.7■□□□□ 0.1
HDAC8-217ENST00000478743 ATN1P54259 1190 aaPredicted RBP15.7■□□□□ 0.1
HDAC8-217ENST00000478743 SMAD3P84022 425 aaKnown RBP15.7■□□□□ 0.1
HDAC8-217ENST00000478743 NFIAQ12857 509 aa15.7■□□□□ 0.1
HDAC8-217ENST00000478743 TRIM26Q12899 539 aaPredicted RBP15.7■□□□□ 0.1
HDAC8-217ENST00000478743 FAM110CQ1W6H9 321 aa15.7■□□□□ 0.1
HDAC8-217ENST00000478743 C8orf58Q8NAV2 365 aa15.7■□□□□ 0.1
HDAC8-217ENST00000478743 PPM1EQ8WY54 764 aa15.7■□□□□ 0.1
HDAC8-217ENST00000478743 TEKT1Q969V4 418 aa15.7■□□□□ 0.1
HDAC8-217ENST00000478743 SNX27Q96L92 541 aa15.7■□□□□ 0.1
HDAC8-217ENST00000478743 UHRF1Q96T88 793 aaPredicted RBP15.7■□□□□ 0.1
HDAC8-217ENST00000478743 PCGF6Q9BYE7 350 aa15.7■□□□□ 0.1
HDAC8-217ENST00000478743 TMOD2Q9NZR1 351 aa15.7■□□□□ 0.1
HDAC8-217ENST00000478743 AFG3L2Q9Y4W6 797 aa15.7■□□□□ 0.1
HDAC8-217ENST00000478743 ZHX2Q9Y6X8 837 aa15.7■□□□□ 0.1
HDAC8-217ENST00000478743 DDX58O95786 925 aaKnown RBP15.69■□□□□ 0.1
HDAC8-217ENST00000478743 CYP2B6P20813 491 aa15.69■□□□□ 0.1
HDAC8-217ENST00000478743 FKBP1CQ5VVH2 108 aa15.69■□□□□ 0.1
HDAC8-217ENST00000478743 ZFPM1Q8IX07 1006 aa15.69■□□□□ 0.1
HDAC8-217ENST00000478743 HOOK2Q96ED9 719 aa15.69■□□□□ 0.1
HDAC8-217ENST00000478743 SLC45A1Q9Y2W3 748 aa15.69■□□□□ 0.1
HDAC8-217ENST00000478743 PHF20L1A8MW92 1017 aa15.68■□□□□ 0.1
HDAC8-217ENST00000478743 PTPRAP18433 802 aa15.68■□□□□ 0.1
HDAC8-217ENST00000478743 HIBADHP31937 336 aaKnown RBP15.68■□□□□ 0.1
HDAC8-217ENST00000478743 FOXO4P98177 505 aa15.68■□□□□ 0.1
HDAC8-217ENST00000478743 CACNB2Q08289 660 aaPredicted RBP15.68■□□□□ 0.1
HDAC8-217ENST00000478743 GCKRQ14397 625 aa15.68■□□□□ 0.1
HDAC8-217ENST00000478743 G2E3Q7L622 706 aa15.68■□□□□ 0.1
HDAC8-217ENST00000478743 FASTKD5Q7L8L6 764 aaKnown RBP15.68■□□□□ 0.1
HDAC8-217ENST00000478743 FAM151AQ8WW52 585 aa15.68■□□□□ 0.1
HDAC8-217ENST00000478743 ASB2Q96Q27 587 aa15.68■□□□□ 0.1
HDAC8-217ENST00000478743 NCOR1O75376 2440 aa15.67■□□□□ 0.1
HDAC8-217ENST00000478743 MYH13Q9UKX3 1938 aa15.67■□□□□ 0.1
HDAC8-217ENST00000478743 ZNF853P0CG23 659 aa15.67■□□□□ 0.1
HDAC8-217ENST00000478743 RTP1P59025 263 aa15.67■□□□□ 0.1
HDAC8-217ENST00000478743 HDLBPQ00341 1268 aaKnown RBP15.67■□□□□ 0.1
HDAC8-217ENST00000478743 CCL14Q16627 93 aa15.67■□□□□ 0.1
HDAC8-217ENST00000478743 POTEEQ6S8J3 1075 aa15.67■□□□□ 0.1
HDAC8-217ENST00000478743 SCYL3Q8IZE3 742 aa15.67■□□□□ 0.1
HDAC8-217ENST00000478743 SENP6Q9GZR1 1112 aaPredicted RBP15.67■□□□□ 0.1
HDAC8-217ENST00000478743 FAM198AQ9UFP1 575 aa15.67■□□□□ 0.1
HDAC8-217ENST00000478743 AGTPBP1Q9UPW5 1226 aa15.67■□□□□ 0.1
HDAC8-217ENST00000478743 CHMP3Q9Y3E7 222 aa15.67■□□□□ 0.1
HDAC8-217ENST00000478743 XIRP2A4UGR9 3374 aa15.67■□□□□ 0.1
HDAC8-217ENST00000478743 ATAD5Q96QE3 1844 aa15.66■□□□□ 0.1
HDAC8-217ENST00000478743 TRIM75PA6NK02 468 aa15.66■□□□□ 0.1
HDAC8-217ENST00000478743 EPHA10Q5JZY3 1008 aa15.66■□□□□ 0.1
HDAC8-217ENST00000478743 ALYREFQ86V81 257 aaKnown RBP15.66■□□□□ 0.1
HDAC8-217ENST00000478743 BADQ92934 168 aa15.66■□□□□ 0.1
HDAC8-217ENST00000478743 DAGLAQ9Y4D2 1042 aa15.66■□□□□ 0.1
HDAC8-217ENST00000478743 EPHB4P54760 987 aa15.65■□□□□ 0.1
HDAC8-217ENST00000478743 NEXNQ0ZGT2 675 aa15.65■□□□□ 0.1
HDAC8-217ENST00000478743 TSPYL6Q8N831 410 aa15.65■□□□□ 0.1
HDAC8-217ENST00000478743 LRFN3Q9BTN0 628 aa15.65■□□□□ 0.1
HDAC8-217ENST00000478743 THEGQ9P2T0 379 aa15.65■□□□□ 0.1
HDAC8-217ENST00000478743 IFIT5Q13325 482 aaKnown RBP15.64■□□□□ 0.09
HDAC8-217ENST00000478743 ATXN2LQ8WWM7 1075 aaKnown RBP15.64■□□□□ 0.09
HDAC8-217ENST00000478743 PUS3Q9BZE2 481 aaKnown RBP15.64■□□□□ 0.09
HDAC8-217ENST00000478743 CDC42EP5Q6NZY7 148 aa15.63■□□□□ 0.09
HDAC8-217ENST00000478743 SH3RF1Q7Z6J0 888 aa15.63■□□□□ 0.09
HDAC8-217ENST00000478743 PRDM5Q9NQX1 630 aaPredicted RBP15.63■□□□□ 0.09
HDAC8-217ENST00000478743 ATP11BQ9Y2G3 1177 aa15.63■□□□□ 0.09
HDAC8-217ENST00000478743 PDE3AQ14432 1141 aa15.62■□□□□ 0.09
HDAC8-217ENST00000478743 LDHAL6AQ6ZMR3 332 aa15.62■□□□□ 0.09
HDAC8-217ENST00000478743 SH3BP5LQ7L8J4 393 aa15.62■□□□□ 0.09
HDAC8-217ENST00000478743 FBXO33Q7Z6M2 555 aa15.62■□□□□ 0.09
HDAC8-217ENST00000478743 EPHX3Q9H6B9 360 aa15.62■□□□□ 0.09
HDAC8-217ENST00000478743 PICK1Q9NRD5 415 aa15.62■□□□□ 0.09
HDAC8-217ENST00000478743 CNNM1Q9NRU3 951 aa15.62■□□□□ 0.09
HDAC8-217ENST00000478743 PLXNA1Q9UIW2 1896 aa15.62■□□□□ 0.09
HDAC8-217ENST00000478743 CHD9Q3L8U1 2897 aa15.62■□□□□ 0.09
HDAC8-217ENST00000478743 PIEZO1Q92508 2521 aa15.61■□□□□ 0.09
HDAC8-217ENST00000478743 TRIM43BA6NCK2 446 aa15.61■□□□□ 0.09
HDAC8-217ENST00000478743 ZKSCAN1P17029 563 aaPredicted RBP15.61■□□□□ 0.09
HDAC8-217ENST00000478743 DNAJB2P25686 324 aa15.61■□□□□ 0.09
HDAC8-217ENST00000478743 ITGB8P26012 769 aa15.61■□□□□ 0.09
HDAC8-217ENST00000478743 UBE4AQ14139 1066 aa15.61■□□□□ 0.09
HDAC8-217ENST00000478743 DIXDC1Q155Q3 683 aa15.61■□□□□ 0.09
HDAC8-217ENST00000478743 LMBR1LQ6UX01 489 aa15.61■□□□□ 0.09
HDAC8-217ENST00000478743 TRIM43Q96BQ3 446 aaPredicted RBP15.61■□□□□ 0.09
HDAC8-217ENST00000478743 PRKAG2Q9UGJ0 569 aa15.61■□□□□ 0.09
HDAC8-217ENST00000478743 HCN4Q9Y3Q4 1203 aa15.61■□□□□ 0.09
HDAC8-217ENST00000478743 CCDC85BQ15834 202 aaPredicted RBP15.6■□□□□ 0.09
HDAC8-217ENST00000478743 CCDC30Q5VVM6 783 aa15.6■□□□□ 0.09
HDAC8-217ENST00000478743 C1QTNF1Q9BXJ1 281 aa15.6■□□□□ 0.09
HDAC8-217ENST00000478743 TXNRD2Q9NNW7 524 aa15.6■□□□□ 0.09
HDAC8-217ENST00000478743 PDLIM7Q9NR12 457 aa15.6■□□□□ 0.09
HDAC8-217ENST00000478743 ARIH1Q9Y4X5 557 aaPredicted RBP15.6■□□□□ 0.09
HDAC8-217ENST00000478743 RFX7Q2KHR2 1363 aa15.6■□□□□ 0.09
HDAC8-217ENST00000478743 MUC6Q6W4X9 2439 aa15.59■□□□□ 0.09
HDAC8-217ENST00000478743 MRPS5P82675 430 aaKnown RBP15.59■□□□□ 0.09
HDAC8-217ENST00000478743 ADGRE1Q14246 886 aa15.59■□□□□ 0.09
HDAC8-217ENST00000478743 TRIM60Q495X7 471 aa15.59■□□□□ 0.09
HDAC8-217ENST00000478743 HHIPL2Q6UWX4 724 aa15.59■□□□□ 0.09
HDAC8-217ENST00000478743 TBC1D22AQ8WUA7 517 aa15.59■□□□□ 0.09
HDAC8-217ENST00000478743 USP6NLQ92738 828 aa15.59■□□□□ 0.09
HDAC8-217ENST00000478743 RNPC3Q96LT9 517 aaKnown RBP15.59■□□□□ 0.09
HDAC8-217ENST00000478743 MRIQ9BWK5 157 aa15.59■□□□□ 0.09
HDAC8-217ENST00000478743 ASCC2Q9H1I8 757 aaPredicted RBP15.59■□□□□ 0.09
HDAC8-217ENST00000478743 ZNF576Q9H609 170 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms