RNA–Protein interactions for RNA: ENST00000478462.5

MSL3-214, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 549 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-214ENST00000478462 MTMR14Q8NCE2 650 aa9.22□□□□□ -0.93
MSL3-214ENST00000478462 SMC1BQ8NDV3 1235 aa9.22□□□□□ -0.93
MSL3-214ENST00000478462 NSUN4Q96CB9 384 aaKnown RBP9.22□□□□□ -0.93
MSL3-214ENST00000478462 TMOD2Q9NZR1 351 aa9.22□□□□□ -0.93
MSL3-214ENST00000478462 DAGLAQ9Y4D2 1042 aa9.22□□□□□ -0.93
MSL3-214ENST00000478462 PCDHAC2Q9Y5I4 1007 aa9.22□□□□□ -0.93
MSL3-214ENST00000478462 AOX1Q06278 1338 aa9.22□□□□□ -0.93
MSL3-214ENST00000478462 SALL3Q9BXA9 1300 aa9.22□□□□□ -0.93
MSL3-214ENST00000478462 MAST2Q6P0Q8 1798 aa9.22□□□□□ -0.93
MSL3-214ENST00000478462 CLRN2A0PK11 232 aa9.21□□□□□ -0.94
MSL3-214ENST00000478462 TRIM6-TRIM34B2RNG4 842 aa9.21□□□□□ -0.94
MSL3-214ENST00000478462 TULP1O00294 542 aaPredicted RBP9.21□□□□□ -0.94
MSL3-214ENST00000478462 SNPHO15079 494 aa9.21□□□□□ -0.94
MSL3-214ENST00000478462 BAG3O95817 575 aa9.21□□□□□ -0.94
MSL3-214ENST00000478462 CYP7A1P22680 504 aa9.21□□□□□ -0.94
MSL3-214ENST00000478462 PDE4AP27815 886 aa9.21□□□□□ -0.94
MSL3-214ENST00000478462 LRRFIP1Q32MZ4 808 aaKnown RBP9.21□□□□□ -0.94
MSL3-214ENST00000478462 ANGEL2Q5VTE6 544 aaKnown RBP9.21□□□□□ -0.94
MSL3-214ENST00000478462 MAP1SQ66K74 1059 aaPredicted RBP9.21□□□□□ -0.94
MSL3-214ENST00000478462 ZSCAN25Q6NSZ9 544 aa9.21□□□□□ -0.94
MSL3-214ENST00000478462 APOBEC3HQ6NTF7 200 aaKnown RBP9.21□□□□□ -0.94
MSL3-214ENST00000478462 TMED8Q6PL24 325 aaPredicted RBP9.21□□□□□ -0.94
MSL3-214ENST00000478462 SULF1Q8IWU6 871 aa9.21□□□□□ -0.94
MSL3-214ENST00000478462 CNTROBQ8N137 903 aa9.21□□□□□ -0.94
MSL3-214ENST00000478462 RBM46Q8TBY0 533 aaKnown RBP9.21□□□□□ -0.94
MSL3-214ENST00000478462 ZBED3Q96IU2 234 aaPredicted RBP9.21□□□□□ -0.94
MSL3-214ENST00000478462 FSD1Q9BTV5 496 aa9.21□□□□□ -0.94
MSL3-214ENST00000478462 TMEM121BQ9BXQ6 578 aaPredicted RBP9.21□□□□□ -0.94
MSL3-214ENST00000478462 OSBPL3Q9H4L5 887 aa9.21□□□□□ -0.94
MSL3-214ENST00000478462 TDRD3Q9H7E2 651 aaKnown RBP9.21□□□□□ -0.94
MSL3-214ENST00000478462 VEZTQ9HBM0 779 aa9.21□□□□□ -0.94
MSL3-214ENST00000478462 GGA3Q9NZ52 723 aa9.21□□□□□ -0.94
MSL3-214ENST00000478462 MROH7-TTC4A0A0A0MT08 1334 aa9.21□□□□□ -0.94
MSL3-214ENST00000478462 ASTN2O75129 1339 aaPredicted RBP9.21□□□□□ -0.94
MSL3-214ENST00000478462 TRPM7Q96QT4 1865 aa9.21□□□□□ -0.94
MSL3-214ENST00000478462 CDK5RAP2Q96SN8 1893 aa9.2□□□□□ -0.94
MSL3-214ENST00000478462 GPR75-ASB3A0A0A6YYF3 556 aa9.2□□□□□ -0.94
MSL3-214ENST00000478462 PDE6AP16499 860 aa9.2□□□□□ -0.94
MSL3-214ENST00000478462 BTDP43251 543 aa9.2□□□□□ -0.94
MSL3-214ENST00000478462 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.2□□□□□ -0.94
MSL3-214ENST00000478462 CDC37L1Q7L3B6 337 aa9.2□□□□□ -0.94
MSL3-214ENST00000478462 KRT26Q7Z3Y9 468 aa9.2□□□□□ -0.94
MSL3-214ENST00000478462 APOBEC3FQ8IUX4 373 aaKnown RBP9.2□□□□□ -0.94
MSL3-214ENST00000478462 KBTBD3Q8NAB2 608 aa9.2□□□□□ -0.94
MSL3-214ENST00000478462 ZNF384Q8TF68 577 aa9.2□□□□□ -0.94
MSL3-214ENST00000478462 RILPL2Q969X0 211 aa9.2□□□□□ -0.94
MSL3-214ENST00000478462 EVI5LQ96CN4 794 aa9.2□□□□□ -0.94
MSL3-214ENST00000478462 LARP6Q9BRS8 491 aaKnown RBP9.2□□□□□ -0.94
MSL3-214ENST00000478462 USP40Q9NVE5 1235 aa9.2□□□□□ -0.94
MSL3-214ENST00000478462 ZNF70Q9UC06 446 aaPredicted RBP9.2□□□□□ -0.94
MSL3-214ENST00000478462 PGAP2Q9UHJ9 254 aa9.2□□□□□ -0.94
MSL3-214ENST00000478462 GAKO14976 1311 aa9.2□□□□□ -0.94
MSL3-214ENST00000478462 ZFYP08048 801 aaPredicted RBP9.19□□□□□ -0.94
MSL3-214ENST00000478462 TNNI2P48788 182 aa9.19□□□□□ -0.94
MSL3-214ENST00000478462 RGS3P49796 1198 aa9.19□□□□□ -0.94
MSL3-214ENST00000478462 FSTL1Q12841 308 aa9.19□□□□□ -0.94
MSL3-214ENST00000478462 TNFAIP1Q13829 316 aa9.19□□□□□ -0.94
MSL3-214ENST00000478462 CDC42EP5Q6NZY7 148 aa9.19□□□□□ -0.94
MSL3-214ENST00000478462 USP48Q86UV5 1035 aa9.19□□□□□ -0.94
MSL3-214ENST00000478462 MIGA1Q8NAN2 632 aa9.19□□□□□ -0.94
MSL3-214ENST00000478462 GLIS2Q9BZE0 524 aaPredicted RBP9.19□□□□□ -0.94
MSL3-214ENST00000478462 AATFQ9NY61 560 aaKnown RBP eCLIP9.19□□□□□ -0.94
MSL3-214ENST00000478462 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.19□□□□□ -0.94
MSL3-214ENST00000478462 SCAF8Q9UPN6 1271 aaKnown RBP9.19□□□□□ -0.94
MSL3-214ENST00000478462 PITPNM2Q9BZ72 1349 aa9.19□□□□□ -0.94
MSL3-214ENST00000478462 ZNF532Q9HCE3 1301 aa9.19□□□□□ -0.94
MSL3-214ENST00000478462 MYH1P12882 1939 aa9.19□□□□□ -0.94
MSL3-214ENST00000478462 MAGEB6P1A0A0J9YX57 407 aa9.18□□□□□ -0.94
MSL3-214ENST00000478462 TCP10L2B9ZVM9 353 aa9.18□□□□□ -0.94
MSL3-214ENST00000478462 RNF113AO15541 343 aaKnown RBP9.18□□□□□ -0.94
MSL3-214ENST00000478462 ADD2P35612 726 aa9.18□□□□□ -0.94
MSL3-214ENST00000478462 CACNB3P54284 484 aa9.18□□□□□ -0.94
MSL3-214ENST00000478462 PPP4CP60510 307 aa9.18□□□□□ -0.94
MSL3-214ENST00000478462 UBE3CQ15386 1083 aa9.18□□□□□ -0.94
MSL3-214ENST00000478462 TTC22Q5TAA0 569 aa9.18□□□□□ -0.94
MSL3-214ENST00000478462 ADGRA1Q86SQ6 560 aa9.18□□□□□ -0.94
MSL3-214ENST00000478462 SKAP1Q86WV1 359 aa9.18□□□□□ -0.94
MSL3-214ENST00000478462 CERS3Q8IU89 383 aa9.18□□□□□ -0.94
MSL3-214ENST00000478462 TMC2Q8TDI7 906 aa9.18□□□□□ -0.94
MSL3-214ENST00000478462 DEFB129Q9H1M3 183 aa9.18□□□□□ -0.94
MSL3-214ENST00000478462 BAZ2AQ9UIF9 1905 aaKnown RBP9.17□□□□□ -0.94
MSL3-214ENST00000478462 FOCADQ5VW36 1801 aa9.17□□□□□ -0.94
MSL3-214ENST00000478462 TCRBV5S4A2TA0A5A2 114 aa9.17□□□□□ -0.94
MSL3-214ENST00000478462 ADM5C9JUS6 153 aa9.17□□□□□ -0.94
MSL3-214ENST00000478462 TRAF5O00463 557 aa9.17□□□□□ -0.94
MSL3-214ENST00000478462 ITGBL1O95965 494 aaPredicted RBP9.17□□□□□ -0.94
MSL3-214ENST00000478462 DYNLL1P63167 89 aaKnown RBP9.17□□□□□ -0.94
MSL3-214ENST00000478462 TCP10Q12799 353 aa9.17□□□□□ -0.94
MSL3-214ENST00000478462 MMRN1Q13201 1228 aa9.17□□□□□ -0.94
MSL3-214ENST00000478462 RASA3Q14644 834 aa9.17□□□□□ -0.94
MSL3-214ENST00000478462 SLFNL1Q499Z3 407 aa9.17□□□□□ -0.94
MSL3-214ENST00000478462 FKBP1CQ5VVH2 108 aa9.17□□□□□ -0.94
MSL3-214ENST00000478462 TEX11Q8IYF3 940 aa9.17□□□□□ -0.94
MSL3-214ENST00000478462 SH3RF3Q8TEJ3 882 aaPredicted RBP9.17□□□□□ -0.94
MSL3-214ENST00000478462 AIDAQ96BJ3 306 aa9.17□□□□□ -0.94
MSL3-214ENST00000478462 MBD4O95243 580 aa9.16□□□□□ -0.94
MSL3-214ENST00000478462 CHGBP05060 677 aa9.16□□□□□ -0.94
MSL3-214ENST00000478462 SDSP20132 328 aa9.16□□□□□ -0.94
MSL3-214ENST00000478462 NF2P35240 595 aa9.16□□□□□ -0.94
MSL3-214ENST00000478462 USP5P45974 858 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms