RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 WDR89Q96FK6 387 aaPredicted RBP6.35□□□□□ -1.39
GPNMB-210ENST00000478451 MFSD14AQ96MC6 490 aa6.35□□□□□ -1.39
GPNMB-210ENST00000478451 NECAB3Q96P71 396 aaPredicted RBP6.35□□□□□ -1.39
GPNMB-210ENST00000478451 KRT82Q9NSB4 513 aa6.35□□□□□ -1.39
GPNMB-210ENST00000478451 FAM105AQ9NUU6 356 aa6.35□□□□□ -1.39
GPNMB-210ENST00000478451 FAM8A1Q9UBU6 413 aa6.35□□□□□ -1.39
GPNMB-210ENST00000478451 CCDC9Q9Y3X0 531 aaKnown RBP6.35□□□□□ -1.39
GPNMB-210ENST00000478451 PRDM2Q13029 1718 aa6.35□□□□□ -1.39
GPNMB-210ENST00000478451 BAZ1BQ9UIG0 1483 aaKnown RBP6.34□□□□□ -1.39
GPNMB-210ENST00000478451 CEP164Q9UPV0 1460 aa6.34□□□□□ -1.39
GPNMB-210ENST00000478451 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.34□□□□□ -1.39
GPNMB-210ENST00000478451 TMPRSS2O15393 492 aa6.34□□□□□ -1.39
GPNMB-210ENST00000478451 FBXO24O75426 580 aa6.34□□□□□ -1.39
GPNMB-210ENST00000478451 NME2P22392 152 aa6.34□□□□□ -1.39
GPNMB-210ENST00000478451 GNA15P30679 374 aa6.34□□□□□ -1.39
GPNMB-210ENST00000478451 KIF4BQ2VIQ3 1234 aa6.34□□□□□ -1.39
GPNMB-210ENST00000478451 EAPPQ56P03 285 aaPredicted RBP6.34□□□□□ -1.39
GPNMB-210ENST00000478451 KCNB2Q92953 911 aa6.34□□□□□ -1.39
GPNMB-210ENST00000478451 FRMD6Q96NE9 622 aa6.34□□□□□ -1.39
GPNMB-210ENST00000478451 CEP44Q9C0F1 390 aa6.34□□□□□ -1.39
GPNMB-210ENST00000478451 GSX1Q9H4S2 264 aaPredicted RBP6.34□□□□□ -1.39
GPNMB-210ENST00000478451 ACSS3Q9H6R3 686 aa6.34□□□□□ -1.39
GPNMB-210ENST00000478451 PPP1R9AQ9ULJ8 1098 aa6.34□□□□□ -1.39
GPNMB-210ENST00000478451 ENC1O14682 589 aa6.33□□□□□ -1.4
GPNMB-210ENST00000478451 ARNTP27540 789 aa6.33□□□□□ -1.4
GPNMB-210ENST00000478451 ASPAP45381 313 aa6.33□□□□□ -1.4
GPNMB-210ENST00000478451 FGD1P98174 961 aa6.33□□□□□ -1.4
GPNMB-210ENST00000478451 ID3Q02535 119 aa6.33□□□□□ -1.4
GPNMB-210ENST00000478451 DNAJC14Q6Y2X3 702 aaPredicted RBP6.33□□□□□ -1.4
GPNMB-210ENST00000478451 NPAS4Q8IUM7 802 aa6.33□□□□□ -1.4
GPNMB-210ENST00000478451 FBXL6Q8N531 539 aa6.33□□□□□ -1.4
GPNMB-210ENST00000478451 ANKRD24Q8TF21 1146 aa6.33□□□□□ -1.4
GPNMB-210ENST00000478451 EMILIN2Q9BXX0 1053 aa6.33□□□□□ -1.4
GPNMB-210ENST00000478451 SEMA6CQ9H3T2 930 aa6.33□□□□□ -1.4
GPNMB-210ENST00000478451 CRIM1Q9NZV1 1036 aa6.33□□□□□ -1.4
GPNMB-210ENST00000478451 PRKAG2Q9UGJ0 569 aa6.33□□□□□ -1.4
GPNMB-210ENST00000478451 ADGRE2Q9UHX3 823 aa6.33□□□□□ -1.4
GPNMB-210ENST00000478451 BIVM-ERCC5R4GMW8 1640 aa6.32□□□□□ -1.4
GPNMB-210ENST00000478451 PRR19A6NJB7 356 aa6.32□□□□□ -1.4
GPNMB-210ENST00000478451 WDR64B1ANS9 1081 aa6.32□□□□□ -1.4
GPNMB-210ENST00000478451 PAGE1O75459 146 aa6.32□□□□□ -1.4
GPNMB-210ENST00000478451 NFICP08651 508 aa6.32□□□□□ -1.4
GPNMB-210ENST00000478451 SLFN14P0C7P3 912 aa6.32□□□□□ -1.4
GPNMB-210ENST00000478451 SPINK2P20155 84 aa6.32□□□□□ -1.4
GPNMB-210ENST00000478451 EIF4BP23588 611 aaKnown RBP6.32□□□□□ -1.4
GPNMB-210ENST00000478451 MFAP1P55081 439 aaKnown RBP6.32□□□□□ -1.4
GPNMB-210ENST00000478451 MAP7Q14244 749 aa6.32□□□□□ -1.4
GPNMB-210ENST00000478451 MAP1SQ66K74 1059 aaPredicted RBP6.32□□□□□ -1.4
GPNMB-210ENST00000478451 INTS5Q6P9B9 1019 aaKnown RBP6.32□□□□□ -1.4
GPNMB-210ENST00000478451 GIMAP7Q8NHV1 300 aa6.32□□□□□ -1.4
GPNMB-210ENST00000478451 DUSP9Q99956 384 aaKnown RBP6.32□□□□□ -1.4
GPNMB-210ENST00000478451 ATXN3LQ9H3M9 355 aa6.32□□□□□ -1.4
GPNMB-210ENST00000478451 CBX8Q9HC52 389 aa6.32□□□□□ -1.4
GPNMB-210ENST00000478451 SAMM50Q9Y512 469 aa6.32□□□□□ -1.4
GPNMB-210ENST00000478451 PCDHGC5Q9Y5F6 944 aa6.32□□□□□ -1.4
GPNMB-210ENST00000478451 F13BP05160 661 aa6.31□□□□□ -1.4
GPNMB-210ENST00000478451 GRIK1P39086 918 aa6.31□□□□□ -1.4
GPNMB-210ENST00000478451 ZNF252P-AS1Q0IIN9 211 aa6.31□□□□□ -1.4
GPNMB-210ENST00000478451 ZAR1Q86SH2 424 aa6.31□□□□□ -1.4
GPNMB-210ENST00000478451 TBC1D32Q96NH3 1257 aa6.31□□□□□ -1.4
GPNMB-210ENST00000478451 FANCD2OSQ96PS1 177 aa6.31□□□□□ -1.4
GPNMB-210ENST00000478451 PIDD1Q9HB75 910 aa6.31□□□□□ -1.4
GPNMB-210ENST00000478451 ATG3Q9NT62 314 aa6.31□□□□□ -1.4
GPNMB-210ENST00000478451 TTF2Q9UNY4 1162 aaKnown RBP6.31□□□□□ -1.4
GPNMB-210ENST00000478451 DAGLAQ9Y4D2 1042 aa6.31□□□□□ -1.4
GPNMB-210ENST00000478451 SYNJ1O43426 1573 aa6.31□□□□□ -1.4
GPNMB-210ENST00000478451 TOP2BQ02880 1626 aa6.3□□□□□ -1.4
GPNMB-210ENST00000478451 CENPBP07199 599 aaPredicted RBP6.3□□□□□ -1.4
GPNMB-210ENST00000478451 CELA3AP09093 270 aa6.3□□□□□ -1.4
GPNMB-210ENST00000478451 ADMP35318 185 aa6.3□□□□□ -1.4
GPNMB-210ENST00000478451 CPSF6Q16630 551 aaKnown RBP eCLIP6.3□□□□□ -1.4
GPNMB-210ENST00000478451 CCDC27Q2M243 656 aa6.3□□□□□ -1.4
GPNMB-210ENST00000478451 GPBAR1Q8TDU6 330 aa6.3□□□□□ -1.4
GPNMB-210ENST00000478451 ACSBG1Q96GR2 724 aa6.3□□□□□ -1.4
GPNMB-210ENST00000478451 OSBPL1AQ9BXW6 950 aa6.3□□□□□ -1.4
GPNMB-210ENST00000478451 RNF19AQ9NV58 838 aa6.3□□□□□ -1.4
GPNMB-210ENST00000478451 ADAMTS4O75173 837 aa6.29□□□□□ -1.4
GPNMB-210ENST00000478451 BMP6P22004 513 aa6.29□□□□□ -1.4
GPNMB-210ENST00000478451 LLGL2Q6P1M3 1020 aa6.29□□□□□ -1.4
GPNMB-210ENST00000478451 DTX1Q86Y01 620 aa6.29□□□□□ -1.4
GPNMB-210ENST00000478451 SHISA5Q8N114 240 aa6.29□□□□□ -1.4
GPNMB-210ENST00000478451 GRIN3AQ8TCU5 1115 aa6.29□□□□□ -1.4
GPNMB-210ENST00000478451 GATA6Q92908 595 aa6.29□□□□□ -1.4
GPNMB-210ENST00000478451 METTL22Q9BUU2 404 aaPredicted RBP6.29□□□□□ -1.4
GPNMB-210ENST00000478451 DISC1Q9NRI5 854 aa6.29□□□□□ -1.4
GPNMB-210ENST00000478451 CACNA2D2Q9NY47 1150 aa6.29□□□□□ -1.4
GPNMB-210ENST00000478451 PIM2Q9P1W9 311 aa6.29□□□□□ -1.4
GPNMB-210ENST00000478451 AK5Q9Y6K8 562 aa6.29□□□□□ -1.4
GPNMB-210ENST00000478451 SOGA1O94964 1423 aa6.28□□□□□ -1.4
GPNMB-210ENST00000478451 DYNC1LI2O43237 492 aaPredicted RBP6.28□□□□□ -1.4
GPNMB-210ENST00000478451 TRIM37O94972 964 aa6.28□□□□□ -1.4
GPNMB-210ENST00000478451 WNT11O96014 354 aa6.28□□□□□ -1.4
GPNMB-210ENST00000478451 TTLL4Q14679 1199 aa6.28□□□□□ -1.4
GPNMB-210ENST00000478451 LRRC14Q15048 493 aa6.28□□□□□ -1.4
GPNMB-210ENST00000478451 RASIP1Q5U651 963 aa6.28□□□□□ -1.4
GPNMB-210ENST00000478451 PCNX4Q63HM2 1172 aa6.28□□□□□ -1.4
GPNMB-210ENST00000478451 SEZ6L2Q6UXD5 910 aa6.28□□□□□ -1.4
GPNMB-210ENST00000478451 MPRIPQ6WCQ1 1025 aa6.28□□□□□ -1.4
GPNMB-210ENST00000478451 SV2BQ7L1I2 683 aa6.28□□□□□ -1.4
GPNMB-210ENST00000478451 LGR6Q9HBX8 967 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms