RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 LPIN3Q9BQK8 851 aa7.46□□□□□ -1.21
VPS45-207ENST00000477558 PODXL2Q9NZ53 605 aa7.46□□□□□ -1.21
VPS45-207ENST00000477558 TONSLQ96HA7 1378 aa7.46□□□□□ -1.22
VPS45-207ENST00000477558 KIF1AQ12756 1690 aa7.46□□□□□ -1.22
VPS45-207ENST00000477558 MSTNO14793 375 aa7.45□□□□□ -1.22
VPS45-207ENST00000477558 TOM1O60784 492 aa7.45□□□□□ -1.22
VPS45-207ENST00000477558 GHRHP01286 108 aa7.45□□□□□ -1.22
VPS45-207ENST00000477558 NBPF8Q3BBV2 869 aa7.45□□□□□ -1.22
VPS45-207ENST00000477558 SMG9Q9H0W8 520 aaKnown RBP7.45□□□□□ -1.22
VPS45-207ENST00000477558 RASSF4Q9H2L5 321 aa7.45□□□□□ -1.22
VPS45-207ENST00000477558 RRAGCQ9HB90 399 aa7.45□□□□□ -1.22
VPS45-207ENST00000477558 TULP4Q9NRJ4 1543 aa7.45□□□□□ -1.22
VPS45-207ENST00000477558 SBNO2Q9Y2G9 1366 aa7.45□□□□□ -1.22
VPS45-207ENST00000477558 RGPD8O14715 1765 aaPredicted RBP7.45□□□□□ -1.22
VPS45-207ENST00000477558 ANKARQ7Z5J8 1434 aa7.45□□□□□ -1.22
VPS45-207ENST00000477558 PNMA6FA0A0J9YX94 578 aa7.44□□□□□ -1.22
VPS45-207ENST00000477558 M0R082 166 aa7.44□□□□□ -1.22
VPS45-207ENST00000477558 ADAM23O75077 832 aa7.44□□□□□ -1.22
VPS45-207ENST00000477558 SNRPNP63162 240 aaKnown RBP7.44□□□□□ -1.22
VPS45-207ENST00000477558 TAGLNQ01995 201 aaKnown RBP7.44□□□□□ -1.22
VPS45-207ENST00000477558 ENOX2Q16206 610 aaKnown RBP7.44□□□□□ -1.22
VPS45-207ENST00000477558 PLA2G4EQ3MJ16 856 aa7.44□□□□□ -1.22
VPS45-207ENST00000477558 PEAR1Q5VY43 1037 aaPredicted RBP7.44□□□□□ -1.22
VPS45-207ENST00000477558 ADAMTSL4Q6UY14 1074 aa7.44□□□□□ -1.22
VPS45-207ENST00000477558 GALNT12Q8IXK2 581 aa7.44□□□□□ -1.22
VPS45-207ENST00000477558 ZNF417Q8TAU3 575 aa7.44□□□□□ -1.22
VPS45-207ENST00000477558 CCDC74AQ96AQ1 378 aa7.44□□□□□ -1.22
VPS45-207ENST00000477558 PLD4Q96BZ4 506 aa7.44□□□□□ -1.22
VPS45-207ENST00000477558 SPACA7Q96KW9 195 aa7.44□□□□□ -1.22
VPS45-207ENST00000477558 ZNF587Q96SQ5 575 aaPredicted RBP7.44□□□□□ -1.22
VPS45-207ENST00000477558 DNAJC25Q9H1X3 360 aa7.44□□□□□ -1.22
VPS45-207ENST00000477558 SHPRHQ149N8 1683 aa7.44□□□□□ -1.22
VPS45-207ENST00000477558 ATP7BP35670 1465 aa7.44□□□□□ -1.22
VPS45-207ENST00000477558 PHLPP1O60346 1717 aa7.44□□□□□ -1.22
VPS45-207ENST00000477558 ITSN1Q15811 1721 aa7.44□□□□□ -1.22
VPS45-207ENST00000477558 NFKBIEO00221 500 aa7.44□□□□□ -1.22
VPS45-207ENST00000477558 RGS9O75916 674 aaPredicted RBP7.44□□□□□ -1.22
VPS45-207ENST00000477558 XP32Q5T750 250 aa7.44□□□□□ -1.22
VPS45-207ENST00000477558 PI16Q6UXB8 463 aa7.44□□□□□ -1.22
VPS45-207ENST00000477558 EPS8L3Q8TE67 593 aaKnown RBP7.44□□□□□ -1.22
VPS45-207ENST00000477558 DCAF5Q96JK2 942 aa7.44□□□□□ -1.22
VPS45-207ENST00000477558 HHIPQ96QV1 700 aa7.44□□□□□ -1.22
VPS45-207ENST00000477558 JPH1Q9HDC5 661 aaPredicted RBP7.44□□□□□ -1.22
VPS45-207ENST00000477558 DZANK1Q9NVP4 752 aa7.44□□□□□ -1.22
VPS45-207ENST00000477558 CEP135Q66GS9 1140 aa7.43□□□□□ -1.22
VPS45-207ENST00000477558 WAPLQ7Z5K2 1190 aa7.43□□□□□ -1.22
VPS45-207ENST00000477558 PRAM1Q96QH2 718 aa7.43□□□□□ -1.22
VPS45-207ENST00000477558 OSMRQ99650 979 aa7.43□□□□□ -1.22
VPS45-207ENST00000477558 ZKSCAN3Q9BRR0 538 aa7.43□□□□□ -1.22
VPS45-207ENST00000477558 PBX4Q9BYU1 374 aa7.43□□□□□ -1.22
VPS45-207ENST00000477558 NPHS2Q9NP85 383 aa7.43□□□□□ -1.22
VPS45-207ENST00000477558 RNF19AQ9NV58 838 aa7.43□□□□□ -1.22
VPS45-207ENST00000477558 PXDNQ92626 1479 aa7.42□□□□□ -1.22
VPS45-207ENST00000477558 CNTNAP5Q8WYK1 1306 aa7.42□□□□□ -1.22
VPS45-207ENST00000477558 COL22A1Q8NFW1 1626 aaPredicted RBP7.42□□□□□ -1.22
VPS45-207ENST00000477558 TRPM3Q9HCF6 1732 aaPredicted RBP7.42□□□□□ -1.22
VPS45-207ENST00000477558 A0A1W2PP55 124 aa7.42□□□□□ -1.22
VPS45-207ENST00000477558 EDN3P14138 238 aa7.42□□□□□ -1.22
VPS45-207ENST00000477558 DGKGP49619 791 aa7.42□□□□□ -1.22
VPS45-207ENST00000477558 AFF1P51825 1210 aaKnown RBP7.42□□□□□ -1.22
VPS45-207ENST00000477558 COL9A3Q14050 684 aaPredicted RBP7.42□□□□□ -1.22
VPS45-207ENST00000477558 GRIK5Q16478 980 aa7.42□□□□□ -1.22
VPS45-207ENST00000477558 EAPPQ56P03 285 aaPredicted RBP7.42□□□□□ -1.22
VPS45-207ENST00000477558 SPOCK3Q9BQ16 436 aa7.42□□□□□ -1.22
VPS45-207ENST00000477558 RBSNQ9H1K0 784 aa7.42□□□□□ -1.22
VPS45-207ENST00000477558 FRRS1LQ9P0K9 344 aa7.42□□□□□ -1.22
VPS45-207ENST00000477558 STK26Q9P289 416 aa7.42□□□□□ -1.22
VPS45-207ENST00000477558 TRIM33Q9UPN9 1127 aa7.42□□□□□ -1.22
VPS45-207ENST00000477558 ROCK2O75116 1388 aaKnown RBP7.42□□□□□ -1.22
VPS45-207ENST00000477558 LDHBP07195 334 aaKnown RBP7.41□□□□□ -1.22
VPS45-207ENST00000477558 ATF3P18847 181 aa7.41□□□□□ -1.22
VPS45-207ENST00000477558 LINC00114Q6XXX2 140 aa7.41□□□□□ -1.22
VPS45-207ENST00000477558 BRINP3Q76B58 766 aa7.41□□□□□ -1.22
VPS45-207ENST00000477558 PODNQ7Z5L7 613 aa7.41□□□□□ -1.22
VPS45-207ENST00000477558 FBXO33Q7Z6M2 555 aa7.41□□□□□ -1.22
VPS45-207ENST00000477558 BEND7Q8N7W2 519 aaPredicted RBP7.41□□□□□ -1.22
VPS45-207ENST00000477558 TTC9Q92623 222 aa7.41□□□□□ -1.22
VPS45-207ENST00000477558 POP1Q99575 1024 aaKnown RBP7.41□□□□□ -1.22
VPS45-207ENST00000477558 EIF3AQ14152 1382 aaKnown RBP7.4□□□□□ -1.22
VPS45-207ENST00000477558 CRYBG1Q9Y4K1 1723 aa7.4□□□□□ -1.22
VPS45-207ENST00000477558 LILRB5O75023 590 aa7.4□□□□□ -1.22
VPS45-207ENST00000477558 ERCC3P19447 782 aa7.4□□□□□ -1.22
VPS45-207ENST00000477558 COL19A1Q14993 1142 aa7.4□□□□□ -1.22
VPS45-207ENST00000477558 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.4□□□□□ -1.22
VPS45-207ENST00000477558 GDF6Q6KF10 455 aaPredicted RBP7.4□□□□□ -1.22
VPS45-207ENST00000477558 TRAK1Q9UPV9 953 aa7.4□□□□□ -1.22
VPS45-207ENST00000477558 ALS2Q96Q42 1657 aa7.4□□□□□ -1.23
VPS45-207ENST00000477558 PRR36Q9H6K5 1346 aa7.4□□□□□ -1.23
VPS45-207ENST00000477558 PDE2AO00408 941 aaPredicted RBP7.39□□□□□ -1.23
VPS45-207ENST00000477558 GADD45BO75293 160 aaPredicted RBP7.39□□□□□ -1.23
VPS45-207ENST00000477558 ITGB2P05107 769 aa7.39□□□□□ -1.23
VPS45-207ENST00000477558 HSPA1LP34931 641 aa7.39□□□□□ -1.23
VPS45-207ENST00000477558 RGS22Q8NE09 1264 aa7.39□□□□□ -1.23
VPS45-207ENST00000477558 NXPE3Q969Y0 559 aa7.39□□□□□ -1.23
VPS45-207ENST00000477558 LACRTQ9GZZ8 138 aa7.39□□□□□ -1.23
VPS45-207ENST00000477558 PRDM6Q9NQX0 595 aa7.39□□□□□ -1.23
VPS45-207ENST00000477558 CCDC9Q9Y3X0 531 aaKnown RBP7.39□□□□□ -1.23
VPS45-207ENST00000477558 MED1Q15648 1581 aaPredicted RBP7.39□□□□□ -1.23
VPS45-207ENST00000477558 NRKQ7Z2Y5 1582 aa7.39□□□□□ -1.23
VPS45-207ENST00000477558 CENPJQ9HC77 1338 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms